CuGenDBv2

Gene ID	Clc06G16890
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	protein Asterix-like
Genome location	ClcChr06:27582440..27585204
RNA-Seq Expression	Clc06G16890
Synteny	Clc06G16890
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0045048 - protein insertion into ER membrane (biological process) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005351 - PAT complex subunit Asterix

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587575.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-49

94.59

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Query:  SRPDLRASQEMSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTN
        S   LRAS EMSTQANDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTN
Subjt:  SRPDLRASQEMSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTN

Query:  YLGPARPGTKS
        YLGPARPGTKS
Subjt:  YLGPARPGTKS

XP_004138191.1 protein Asterix [Cucumis sativus]

8.8e-46

96.04

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPG K
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_008453260.1 PREDICTED: protein Asterix [Cucumis melo]

1.8e-46

98.02

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYL PARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_022933634.1 protein Asterix-like [Cucurbita moschata]

6.1e-47

98.02

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_038880376.1 protein Asterix [Benincasa hispida]

3.7e-52

98.23

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Query:  RLSRPDLRASQEMSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLV
        R SR DLRASQEMSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLV
Subjt:  RLSRPDLRASQEMSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLV

Query:  TNYLGPARPGTKS
        TNYLGPARPGTKS
Subjt:  TNYLGPARPGTKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSF0 Uncharacterized protein

4.3e-46

96.04

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPG K
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A1S3BWL0 protein Asterix

8.6e-47

98.02

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYL PARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1E5Z1 protein Asterix-like

9.5e-46

95.05

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+P VNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL P RPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1F0A5 protein Asterix-like

2.9e-47

98.02

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1KYK4 protein Asterix-like

2.9e-47

98.02

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Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

SwissProt top hits

e value

%identity

Alignment

Q09993 Protein Asterix

8.6e-04

31.68

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Query:  QANDPRQPSAA---KPFVAPAVNPQDLPVD----YSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPAR
        Q  DPR+ +     KP  + A   Q +  D    Y   + ++F + G+M R K  SWLA++    S AN R   +D KQI  + M ++  +V +YL    
Subjt:  QANDPRQPSAA---KPFVAPAVNPQDLPVD----YSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPAR

Query:  P
        P
Subjt:  P

Q9SD88 Protein Asterix

7.5e-40

79.8

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Query:  STQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        ++  NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Subjt:  STQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Arabidopsis top hits

e value

%identity

Alignment

AT5G07960.1 unknown protein

5.3e-41

79.8

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Query:  STQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        ++  NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Subjt:  STQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Sequences

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CDS sequence

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ATGAAAAGAAAATCCAATATCCATAAGTATTGGACGAGCCGGTTCGGTTCAATTAAACCAATCGCATTCTTCATGCAGCCCGAAAATAGACCGGGCCGTATCCAA
TTCACCAGAACAATTATATCGAGGCTGAGTCGTCCAGACTTGAGAGCCAGTCAAGAGATGTCGACACAAGCGAATGATCCACGGCAGCCGTCGGCGGCGAAGCCT
TTTGTTGCTCCGGCAGTGAATCCACAAGATCTTCCCGTTGATTATTCCGGTTTCATCGCCGTAGTTTTCGGCATCGCCGGTGTCATGTTCAGGTACAAGCTTAGT
TCGTGGCTAGCCATCATATTTTGCGCCCAATCGCTTGCGAACATGAGGAATGTTGAGAACGATCTCAAGCAGATTTCTATGGCCATGATGTTTGCTATTATGGGA
TTAGTGACAAATTACTTGGGACCTGCGCGACCAGGAACAAAAAGTTAG

mRNA sequence

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Protein sequence

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MKRKSNIHKYWTSRFGSIKPIAFFMQPENRPGRIQFTRTIISRLSRPDLRASQEMSTQANDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLS
SWLAIIFCAQSLANMRNVENDLKQISMAMMFAIMGLVTNYLGPARPGTKS

Clc06G16890 (gene) of Watermelon (cordophanus) v2 genome