; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G17090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G17090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiontranscription factor UNE10
Genome locationClcChr06:27729745..27732985
RNA-Seq ExpressionClc06G17090
SyntenyClc06G17090
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR031066 - Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138310.2 transcription factor UNE10 [Cucumis sativus]8.0e-13577.69Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMNE--------VLLQMHSTKHSWGQSEDT
        MSQW  VPN NHHQ H   QQ Q   +   ++H H F H N TLF+HN ++PMPKYE MERTWESG+Q+AA  E        VL QM STKHSW +SEDT
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMNE--------VLLQMHSTKHSWGQSEDT

Query:  LESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQK
        LESIVHSSLSRKRTRS+ +  KDE+LM+ ASLESHRTFK+KNSIQDLA +HDGSE+E+NMKGKTDGSCS R+TRT AINHNQ ERRRRDRINQ+MKDLQK
Subjt:  LESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQK

Query:  LVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI-QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSK
        LVPNGSKTD ASLLDDTIQYLKQLQAQVQFM SIRSAVPQ VMPLGI QQQLQMSLLAARMGLL AASMASSSSSFPCAATFP I LPS I+STTKPKSK
Subjt:  LVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI-QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSK

Query:  LSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS
        LS  AF PPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTP+QTSK  QSQ + G KED+HQS
Subjt:  LSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS

XP_008453232.1 PREDICTED: transcription factor UNE10 [Cucumis melo]9.7e-13377.53Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESG-EQEAAM-------NEVLLQMHSTKHSWGQSEDT
        MSQW +VPN NHH  HQ+ Q QQ  + + SSSH H F H N TLF+H N++P PKYE MERTWESG +QEAAM        EVL QM STKHSW +SEDT
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESG-EQEAAM-------NEVLLQMHSTKHSWGQSEDT

Query:  LESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQK
        LESIVHSSLSRKRTRS+ +Y KDE+LM+ ASLESHRTFK+KNSIQDLA +HDGSEEE+NMKGK  GSCS RQTRT AINHNQ ERRRRDRINQKMKDLQK
Subjt:  LESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQK

Query:  LVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPK
        LVPNGSKTD ASLLDDTIQYLKQLQAQVQFM SIRSA  Q VMPLGI   QQQLQMSLLAAR GLLDAAS+ASSSSSFP AATFP ILLPS I+STTKPK
Subjt:  LVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPK

Query:  SKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS
        SK S GAF PPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTP+QT+K  QSQ + G KED+H S
Subjt:  SKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS

XP_022921401.1 transcription factor PIF7-like isoform X1 [Cucurbita moschata]1.6e-11973.18Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH
        M+QW +VP WN  Q H      +DA+R   SSH HFPH N T F+H N+VPM KYEA+ERTWESG+QEAA++   EV+LQM STKHSWGQSEDTLESIVH
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH

Query:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK
        SSL RKRTRS+ +  KDE+ MSGA LESHR+FK KNSI+DLAPD DGSE+EHN K KT GSCS R+T       QSERRRRDRINQK+KDLQKLVPN SK
Subjt:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK

Query:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGA
        TD ASLLDDTIQYLKQL+AQVQFM SIRS VPQ ++PLG+   QQQLQ+SLLAARMGLLD ASMASSSSSFPCAA   P LLPS IIS+TKPK KLS  A
Subjt:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGA

Query:  FFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS
        F PPTDPFCT LAQSMDMD YSKMVTLYCQEVNRTPRQ SK  +SQ +EGI+ED+HQS
Subjt:  FFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS

XP_022988525.1 transcription factor PIF7-like isoform X1 [Cucurbita maxima]3.3e-12072.98Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH
        M+QW +VP WN  Q H+           S SSH HFPH N T F+H N+VPM KYEA+ERTWE+G+QEAA++   EVLLQM STKHSWGQSEDTLESIVH
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH

Query:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK
        SSL RKRTRS+ +  KDE+ MSGA LESHR+FK KNSI+DLAPD DGSE+EHN K KT GSCS R+T       QSERRRRDRINQK+KDLQKLVPN SK
Subjt:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK

Query:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI----QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPG
        TD ASLLDDTIQYLKQL+AQVQFM SIRS VPQ ++PLG+    QQQLQ+SLLAARMGLLD ASMASSSSSFPCAA   P LLPS IIS+TKPKSKLS  
Subjt:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI----QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPG

Query:  AFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS
        AF PPTDPFCTFLAQSMDMD YSKMVTLYCQEVNRTPRQTS+  +SQ +EGI+ED+HQS
Subjt:  AFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS

XP_038878568.1 transcription factor UNE10-like [Benincasa hispida]3.5e-13880.06Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAM-------NEVLLQMHSTKHSWGQSEDTL
        MSQW +V N NHHQSHQSQQQQQ  +  SSSSH H FPH N T F+H N+VPMPKYEA     ESGEQEAAM        EVL QM ST HSWGQS+DTL
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAM-------NEVLLQMHSTKHSWGQSEDTL

Query:  ESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLV
        ESIVHSSLSRKR RS+ +YCKDE+LMSG SL+SHRTFK+KNSIQDLAPD D SEEEHNM+GKTDGSCST+QTR AI HNQSERRRR RI QKMKDLQKLV
Subjt:  ESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLV

Query:  PNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSK
        PNGSKTD ASLLDDTIQYLKQLQAQVQFM SIRSAVPQ  MPLGI   QQQLQMS+LAARMG LDAASMASSSSSFPCAATFPPILLPS IISTTKPKSK
Subjt:  PNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSK

Query:  LSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSKRQSQSLEGIKEDVHQ
         S  +F PPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK     L+GIKED+HQ
Subjt:  LSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSKRQSQSLEGIKEDVHQ

TrEMBL top hitse value%identityAlignment
A0A0A0LSD5 BHLH domain-containing protein1.3e-12282.26Show/hide
Query:  PKYEAMERTWESGEQEAAMNE--------VLLQMHSTKHSWGQSEDTLESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDG
        PKYE MERTWESG+Q+AA  E        VL QM STKHSW +SEDTLESIVHSSLSRKRTRS+ +  KDE+LM+ ASLESHRTFK+KNSIQDLA +HDG
Subjt:  PKYEAMERTWESGEQEAAMNE--------VLLQMHSTKHSWGQSEDTLESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDG

Query:  SEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI-QQQLQ
        SE+E+NMKGKTDGSCS R+TRT AINHNQ ERRRRDRINQ+MKDLQKLVPNGSKTD ASLLDDTIQYLKQLQAQVQFM SIRSAVPQ VMPLGI QQQLQ
Subjt:  SEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI-QQQLQ

Query:  MSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSL
        MSLLAARMGLL AASMASSSSSFPCAATFP I LPS I+STTKPKSKLS  AF PPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTP+QTSK  QSQ +
Subjt:  MSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSL

Query:  EGIKEDVHQS
         G KED+HQS
Subjt:  EGIKEDVHQS

A0A1S3BWW4 transcription factor UNE104.7e-13377.53Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESG-EQEAAM-------NEVLLQMHSTKHSWGQSEDT
        MSQW +VPN NHH  HQ+ Q QQ  + + SSSH H F H N TLF+H N++P PKYE MERTWESG +QEAAM        EVL QM STKHSW +SEDT
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAH-FPHTNPTLFNHNNVVPMPKYEAMERTWESG-EQEAAM-------NEVLLQMHSTKHSWGQSEDT

Query:  LESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQK
        LESIVHSSLSRKRTRS+ +Y KDE+LM+ ASLESHRTFK+KNSIQDLA +HDGSEEE+NMKGK  GSCS RQTRT AINHNQ ERRRRDRINQKMKDLQK
Subjt:  LESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQK

Query:  LVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPK
        LVPNGSKTD ASLLDDTIQYLKQLQAQVQFM SIRSA  Q VMPLGI   QQQLQMSLLAAR GLLDAAS+ASSSSSFP AATFP ILLPS I+STTKPK
Subjt:  LVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPK

Query:  SKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS
        SK S GAF PPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTP+QT+K  QSQ + G KED+H S
Subjt:  SKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS

A0A5A7UWV9 Transcription factor UNE102.3e-11981.41Show/hide
Query:  PKYEAMERTWESG-EQEAAM-------NEVLLQMHSTKHSWGQSEDTLESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDG
        PKYE MERTWESG +QEAAM        EVL QM STKHSW +SEDTLESIVHSSLSRKRTRS+ +Y KDE+LM+ ASLESHRTFK+KNSIQDLA +HDG
Subjt:  PKYEAMERTWESG-EQEAAM-------NEVLLQMHSTKHSWGQSEDTLESIVHSSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDG

Query:  SEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQ
        SEEE+NMKGK  GSCS RQTRT AINHNQ ERRRRDRINQKMKDLQKLVPNGSKTD ASLLDDTIQYLKQLQAQVQFM SIRSA  Q VMPLGI   QQQ
Subjt:  SEEEHNMKGKTDGSCSTRQTRT-AINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQ

Query:  LQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQ
        LQMSLLAAR GLLDAAS+ASSSSSFP AATFP ILLPS I+STTKPKSK S GAF PPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTP+QT+K  QSQ
Subjt:  LQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQ

Query:  SLEGIKEDVHQS
         + G KED+H S
Subjt:  SLEGIKEDVHQS

A0A6J1E1A4 transcription factor PIF7-like isoform X17.8e-12073.18Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH
        M+QW +VP WN  Q H      +DA+R   SSH HFPH N T F+H N+VPM KYEA+ERTWESG+QEAA++   EV+LQM STKHSWGQSEDTLESIVH
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH

Query:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK
        SSL RKRTRS+ +  KDE+ MSGA LESHR+FK KNSI+DLAPD DGSE+EHN K KT GSCS R+T       QSERRRRDRINQK+KDLQKLVPN SK
Subjt:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK

Query:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGA
        TD ASLLDDTIQYLKQL+AQVQFM SIRS VPQ ++PLG+   QQQLQ+SLLAARMGLLD ASMASSSSSFPCAA   P LLPS IIS+TKPK KLS  A
Subjt:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI---QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGA

Query:  FFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS
        F PPTDPFCT LAQSMDMD YSKMVTLYCQEVNRTPRQ SK  +SQ +EGI+ED+HQS
Subjt:  FFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS

A0A6J1JJT0 transcription factor PIF7-like isoform X11.6e-12072.98Show/hide
Query:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH
        M+QW +VP WN  Q H+           S SSH HFPH N T F+H N+VPM KYEA+ERTWE+G+QEAA++   EVLLQM STKHSWGQSEDTLESIVH
Subjt:  MSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMN---EVLLQMHSTKHSWGQSEDTLESIVH

Query:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK
        SSL RKRTRS+ +  KDE+ MSGA LESHR+FK KNSI+DLAPD DGSE+EHN K KT GSCS R+T       QSERRRRDRINQK+KDLQKLVPN SK
Subjt:  SSLSRKRTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSK

Query:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI----QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPG
        TD ASLLDDTIQYLKQL+AQVQFM SIRS VPQ ++PLG+    QQQLQ+SLLAARMGLLD ASMASSSSSFPCAA   P LLPS IIS+TKPKSKLS  
Subjt:  TDTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGI----QQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPG

Query:  AFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS
        AF PPTDPFCTFLAQSMDMD YSKMVTLYCQEVNRTPRQTS+  +SQ +EGI+ED+HQS
Subjt:  AFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSK-RQSQSLEGIKEDVHQS

SwissProt top hitse value%identityAlignment
Q0JNI9 Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 155.2e-1234.12Show/hide
Query:  HSWGQSEDTLESIVHSSLSRK---RTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRD
        H  G+        VH + +RK    T ++S  C      S   L   +  K +   +  A   D  ++E  +  K+ G+ ST+++RTA  HN SERRRRD
Subjt:  HSWGQSEDTLESIVHSSLSRK---RTRSSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRD

Query:  RINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQFMS-SIRSAVPQTVMPLGIQQQLQMSLLA----------ARMGLLDAASMASSSSSFPCA
        RIN+KM+ LQ+L+PN +K D AS+LD+ I+YLK LQ QVQ MS      +P  ++P  + Q LQ+  +A            MG+ D ++  +        
Subjt:  RINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQFMS-SIRSAVPQTVMPLGIQQQLQMSLLA----------ARMGLLDAASMASSSSSFPCA

Query:  ATFPPILLPSA
        A FP  ++P A
Subjt:  ATFPPILLPSA

Q570R7 Transcription factor PIF74.7e-2131.56Show/hide
Query:  MPKYEAMERTWESGEQEA-AMNEVLLQMHSTKHSWGQSE---DTLESIVH--------------------------SSLSRK------------------
        M  Y   E TWE+G+     + + +    S    W QS    +TLES+VH                           S SRK                  
Subjt:  MPKYEAMERTWESGEQEA-AMNEVLLQMHSTKHSWGQSE---DTLESIVH--------------------------SSLSRK------------------

Query:  RTRSSSDYCKDESLMSGASLESHRTFKT-----KNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKT
        R   S       + MS AS ES R+ KT     ++  +  +   D   +E   +G+  G  + R+ R A  HN+SERRRRDRINQ+M+ LQKL+P  SK 
Subjt:  RTRSSSDYCKDESLMSGASLESHRTFKT-----KNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKT

Query:  DTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVM------PLGI-------------------QQQLQMSLLA--ARMGLLDAASMASSSSSFPCAATF
        D  S+LDD I++LKQLQAQVQFM S+R+ +PQ +M      P  +                   QQQ QMSLLA  ARMG      M    + +      
Subjt:  DTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVM------PLGI-------------------QQQLQMSLLA--ARMGLLDAASMASSSSSFPCAATF

Query:  PPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKM-VTLYCQEVNRTPRQTSKRQSQSLEGIKED
        PP   P  ++         + G+    +DP+  F AQ+M+MD Y+KM   +Y Q+ ++T +      S S    K D
Subjt:  PPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKM-VTLYCQEVNRTPRQTSKRQSQSLEGIKED

Q6AT90 Transcription factor APG1.6e-1335.57Show/hide
Query:  RTFKTKNSIQDLAPDHDGSEEEHNMKGKTDG------SCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQF
        R    ++S  + + +   S++E ++  +  G      + S++++RTA  HN SERRRRDRIN+KM+ LQ+L+PN +K D AS+L++ I+YLK LQ QVQ 
Subjt:  RTFKTKNSIQDLAPDHDGSEEEHNMKGKTDG------SCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQF

Query:  MS-SIRSAVPQTVMPLGI----QQQLQMSLLAARMG-------LLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGAFFPPTDPF
        MS      VP  ++P          +QM  +A  M        L  AA+M  +    P AA FP  + P+A      P S  +P    PP  PF
Subjt:  MS-SIRSAVPQTVMPLGI----QQQLQMSLLAARMG-------LLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGAFFPPTDPF

Q8GZ38 Transcription factor UNE102.0e-2441.45Show/hide
Query:  TFKTKNSIQDLAPDHDG-------SEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQF
        T  +  S  +   DHD         E+E   K     S ST+++R A  HNQSER+RRD+INQ+MK LQKLVPN SKTD AS+LD+ I+YLKQLQAQV  
Subjt:  TFKTKNSIQDLAPDHDG-------SEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQF

Query:  MSSIRSAVPQTVMPLGI--QQQLQMSLLAARM-----------GLLDAASMASSSSSFP------CAATFPPILLPS--AIISTTKPKSKLSPGAFFPPT
        MS  R  +P  ++P+ +  QQQLQMSL++  M           GLLD  SM  +++S P          F P+  PS  A  + ++ +S L P       
Subjt:  MSSIRSAVPQTVMPLGI--QQQLQMSLLAARM-----------GLLDAASMASSSSSFP------CAATFPPILLPS--AIISTTKPKSKLSPGAFFPPT

Query:  DPFCTFLA---QSMDMDFYSKMVTLYCQEVNRTP
        DP   FLA   Q   M+ YS+M TLY Q   + P
Subjt:  DPFCTFLA---QSMDMDFYSKMVTLYCQEVNRTP

Q8GZM7 Transcription factor PIF16.8e-1230.19Show/hide
Query:  SLMSGASLESHRT---FKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK
        S++S + +E  +T    + +   +    D   S  E   + +   + ST+++R A  HN SER+RRDRIN++MK LQ+L+P  +K+D AS+LD+ I+Y+K
Subjt:  SLMSGASLESHRT---FKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK

Query:  QLQAQVQFMS-----------SIRSAVPQTVMPLGIQQQLQ-------MSLLAARMGLLDAASMASSSSSFPCAATFPP-ILLPSAIISTTKPKSKLSPG
         LQ Q+Q MS            ++  +P   M +G+ Q +         ++LAA+  L     MA S   +P  A+ P  + +P+     T  + +   G
Subjt:  QLQAQVQFMS-----------SIRSAVPQTVMPLGIQQQLQ-------MSLLAARMGLLDAASMASSSSSFPCAATFPP-ILLPSAIISTTKPKSKLSPG

Query:  AFFPPTDPFCTF
             TDP+  F
Subjt:  AFFPPTDPFCTF

Arabidopsis top hitse value%identityAlignment
AT2G20180.1 phytochrome interacting factor 3-like 54.8e-1330.19Show/hide
Query:  SLMSGASLESHRT---FKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK
        S++S + +E  +T    + +   +    D   S  E   + +   + ST+++R A  HN SER+RRDRIN++MK LQ+L+P  +K+D AS+LD+ I+Y+K
Subjt:  SLMSGASLESHRT---FKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK

Query:  QLQAQVQFMS-----------SIRSAVPQTVMPLGIQQQLQ-------MSLLAARMGLLDAASMASSSSSFPCAATFPP-ILLPSAIISTTKPKSKLSPG
         LQ Q+Q MS            ++  +P   M +G+ Q +         ++LAA+  L     MA S   +P  A+ P  + +P+     T  + +   G
Subjt:  QLQAQVQFMS-----------SIRSAVPQTVMPLGIQQQLQ-------MSLLAARMGLLDAASMASSSSSFPCAATFPP-ILLPSAIISTTKPKSKLSPG

Query:  AFFPPTDPFCTF
             TDP+  F
Subjt:  AFFPPTDPFCTF

AT2G20180.2 phytochrome interacting factor 3-like 54.8e-1330.19Show/hide
Query:  SLMSGASLESHRT---FKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK
        S++S + +E  +T    + +   +    D   S  E   + +   + ST+++R A  HN SER+RRDRIN++MK LQ+L+P  +K+D AS+LD+ I+Y+K
Subjt:  SLMSGASLESHRT---FKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK

Query:  QLQAQVQFMS-----------SIRSAVPQTVMPLGIQQQLQ-------MSLLAARMGLLDAASMASSSSSFPCAATFPP-ILLPSAIISTTKPKSKLSPG
         LQ Q+Q MS            ++  +P   M +G+ Q +         ++LAA+  L     MA S   +P  A+ P  + +P+     T  + +   G
Subjt:  QLQAQVQFMS-----------SIRSAVPQTVMPLGIQQQLQ-------MSLLAARMGLLDAASMASSSSSFPCAATFPP-ILLPSAIISTTKPKSKLSPG

Query:  AFFPPTDPFCTF
             TDP+  F
Subjt:  AFFPPTDPFCTF

AT4G00050.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-2541.45Show/hide
Query:  TFKTKNSIQDLAPDHDG-------SEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQF
        T  +  S  +   DHD         E+E   K     S ST+++R A  HNQSER+RRD+INQ+MK LQKLVPN SKTD AS+LD+ I+YLKQLQAQV  
Subjt:  TFKTKNSIQDLAPDHDG-------SEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQAQVQF

Query:  MSSIRSAVPQTVMPLGI--QQQLQMSLLAARM-----------GLLDAASMASSSSSFP------CAATFPPILLPS--AIISTTKPKSKLSPGAFFPPT
        MS  R  +P  ++P+ +  QQQLQMSL++  M           GLLD  SM  +++S P          F P+  PS  A  + ++ +S L P       
Subjt:  MSSIRSAVPQTVMPLGI--QQQLQMSLLAARM-----------GLLDAASMASSSSSFP------CAATFPPILLPS--AIISTTKPKSKLSPGAFFPPT

Query:  DPFCTFLA---QSMDMDFYSKMVTLYCQEVNRTP
        DP   FLA   Q   M+ YS+M TLY Q   + P
Subjt:  DPFCTFLA---QSMDMDFYSKMVTLYCQEVNRTP

AT5G61270.1 phytochrome-interacting factor73.3e-2231.56Show/hide
Query:  MPKYEAMERTWESGEQEA-AMNEVLLQMHSTKHSWGQSE---DTLESIVH--------------------------SSLSRK------------------
        M  Y   E TWE+G+     + + +    S    W QS    +TLES+VH                           S SRK                  
Subjt:  MPKYEAMERTWESGEQEA-AMNEVLLQMHSTKHSWGQSE---DTLESIVH--------------------------SSLSRK------------------

Query:  RTRSSSDYCKDESLMSGASLESHRTFKT-----KNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKT
        R   S       + MS AS ES R+ KT     ++  +  +   D   +E   +G+  G  + R+ R A  HN+SERRRRDRINQ+M+ LQKL+P  SK 
Subjt:  RTRSSSDYCKDESLMSGASLESHRTFKT-----KNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKT

Query:  DTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVM------PLGI-------------------QQQLQMSLLA--ARMGLLDAASMASSSSSFPCAATF
        D  S+LDD I++LKQLQAQVQFM S+R+ +PQ +M      P  +                   QQQ QMSLLA  ARMG      M    + +      
Subjt:  DTASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVM------PLGI-------------------QQQLQMSLLA--ARMGLLDAASMASSSSSFPCAATF

Query:  PPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKM-VTLYCQEVNRTPRQTSKRQSQSLEGIKED
        PP   P  ++         + G+    +DP+  F AQ+M+MD Y+KM   +Y Q+ ++T +      S S    K D
Subjt:  PPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKM-VTLYCQEVNRTPRQTSKRQSQSLEGIKED

AT5G61270.2 phytochrome-interacting factor73.9e-2336.5Show/hide
Query:  MSGASLESHRTFKT-----KNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK
        MS AS ES R+ KT     ++  +  +   D   +E   +G+  G  + R+ R A  HN+SERRRRDRINQ+M+ LQKL+P  SK D  S+LDD I++LK
Subjt:  MSGASLESHRTFKT-----KNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLK

Query:  QLQAQVQFMSSIRSAVPQTVM------PLGI-------------------QQQLQMSLLA--ARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTK
        QLQAQVQFM S+R+ +PQ +M      P  +                   QQQ QMSLLA  ARMG      M    + +      PP   P  ++    
Subjt:  QLQAQVQFMSSIRSAVPQTVM------PLGI-------------------QQQLQMSLLA--ARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTK

Query:  PKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKM-VTLYCQEVNRTPRQTSKRQSQSLEGIKED
             + G+    +DP+  F AQ+M+MD Y+KM   +Y Q+ ++T +      S S    K D
Subjt:  PKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKM-VTLYCQEVNRTPRQTSKRQSQSLEGIKED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTTAGCATGAGCCAGTGGAGGTTAGTCCCAAATTGGAATCATCATCAATCTCACCAATCACAACAACAACAACAAGATGCTAACAGATCATCATCATCTTCCCA
TGCCCATTTTCCCCACACAAACCCAACATTGTTTAACCACAATAATGTTGTTCCCATGCCAAAGTATGAAGCTATGGAGAGGACATGGGAAAGTGGAGAGCAAGAAGCAG
CAATGAACGAAGTGCTTCTTCAAATGCATTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAATCCATAGTTCATAGTTCACTGTCCAGGAAACGAACACGA
TCCAGCTCAGATTATTGCAAAGATGAAAGTTTGATGAGTGGGGCTTCTTTAGAATCTCATAGGACCTTCAAAACCAAAAATTCCATTCAAGATTTAGCTCCAGATCATGA
TGGATCGGAGGAAGAACATAACATGAAGGGGAAAACGGATGGAAGTTGCTCCACTAGACAAACTCGAACGGCTATAAATCATAATCAATCTGAAAGAAGACGAAGAGATC
GAATAAACCAGAAGATGAAAGATCTACAAAAGTTGGTGCCTAATGGAAGTAAGACTGATACAGCTTCACTTTTGGATGACACGATTCAATACTTGAAGCAACTTCAAGCA
CAAGTTCAGTTCATGAGCAGCATTAGATCAGCTGTACCACAGACGGTCATGCCTCTAGGAATACAGCAGCAACTTCAAATGTCACTTCTTGCAGCTCGTATGGGACTGCT
CGATGCTGCTTCGATGGCTTCCAGCTCCAGTTCCTTCCCTTGTGCTGCTACATTTCCCCCGATTCTACTGCCTTCGGCCATCATCTCAACAACAAAGCCAAAATCTAAAC
TTTCCCCCGGCGCTTTCTTCCCTCCAACCGATCCTTTCTGCACTTTTCTAGCACAATCAATGGATATGGATTTCTACAGTAAGATGGTGACACTATATTGCCAAGAAGTG
AACAGGACACCACGGCAGACAAGCAAACGGCAATCACAAAGTTTAGAAGGGATCAAGGAGGATGTGCATCAGAGCTAG
mRNA sequenceShow/hide mRNA sequence
CCCAAATCTCACATTATAAACAGATAAAGCTCACAACACAAAGAACAGAAGAGATCAGAGCTTTTTTATGTCAATAGCAATACATTTTTTCTATATATGTTACTTAGCAT
GAGCCAGTGGAGGTTAGTCCCAAATTGGAATCATCATCAATCTCACCAATCACAACAACAACAACAAGATGCTAACAGATCATCATCATCTTCCCATGCCCATTTTCCCC
ACACAAACCCAACATTGTTTAACCACAATAATGTTGTTCCCATGCCAAAGTATGAAGCTATGGAGAGGACATGGGAAAGTGGAGAGCAAGAAGCAGCAATGAACGAAGTG
CTTCTTCAAATGCATTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAATCCATAGTTCATAGTTCACTGTCCAGGAAACGAACACGATCCAGCTCAGATTA
TTGCAAAGATGAAAGTTTGATGAGTGGGGCTTCTTTAGAATCTCATAGGACCTTCAAAACCAAAAATTCCATTCAAGATTTAGCTCCAGATCATGATGGATCGGAGGAAG
AACATAACATGAAGGGGAAAACGGATGGAAGTTGCTCCACTAGACAAACTCGAACGGCTATAAATCATAATCAATCTGAAAGAAGACGAAGAGATCGAATAAACCAGAAG
ATGAAAGATCTACAAAAGTTGGTGCCTAATGGAAGTAAGACTGATACAGCTTCACTTTTGGATGACACGATTCAATACTTGAAGCAACTTCAAGCACAAGTTCAGTTCAT
GAGCAGCATTAGATCAGCTGTACCACAGACGGTCATGCCTCTAGGAATACAGCAGCAACTTCAAATGTCACTTCTTGCAGCTCGTATGGGACTGCTCGATGCTGCTTCGA
TGGCTTCCAGCTCCAGTTCCTTCCCTTGTGCTGCTACATTTCCCCCGATTCTACTGCCTTCGGCCATCATCTCAACAACAAAGCCAAAATCTAAACTTTCCCCCGGCGCT
TTCTTCCCTCCAACCGATCCTTTCTGCACTTTTCTAGCACAATCAATGGATATGGATTTCTACAGTAAGATGGTGACACTATATTGCCAAGAAGTGAACAGGACACCACG
GCAGACAAGCAAACGGCAATCACAAAGTTTAGAAGGGATCAAGGAGGATGTGCATCAGAGCTAGCCAAAAGAAGCTCCAGCATTTGGTTGAATCCAACACAACTAGTTTT
AGTTGAATAGTTAGATATGCCTCATTTCAACCAAATGTTCAAGGCTTTCTATAGTAATTTTGGTGGATGGAAATGAAAATTTCTATTTATTTATTTATTTATTATTATTA
T
Protein sequenceShow/hide protein sequence
MLLSMSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNPTLFNHNNVVPMPKYEAMERTWESGEQEAAMNEVLLQMHSTKHSWGQSEDTLESIVHSSLSRKRTR
SSSDYCKDESLMSGASLESHRTFKTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDTASLLDDTIQYLKQLQA
QVQFMSSIRSAVPQTVMPLGIQQQLQMSLLAARMGLLDAASMASSSSSFPCAATFPPILLPSAIISTTKPKSKLSPGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEV
NRTPRQTSKRQSQSLEGIKEDVHQS