; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G17810 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G17810
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-type domain-containing protein
Genome locationClcChr06:28341155..28343397
RNA-Seq ExpressionClc06G17810
SyntenyClc06G17810
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]3.0e-18795.11Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISR
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]1.2e-18695.1Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]1.5e-18694.56Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DD+LSS+KINMREI EENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNV+SQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLP TDRRFGCGG+ WACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETNV  GSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]1.4e-18795.13Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

XP_038878939.1 uncharacterized protein LOC120071026 [Benincasa hispida]1.5e-18695.14Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMR+I EENDRSVH HSDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCL
        NELGVGDGDSGV RGRI QRASMNCRAWRPDDAFRPQSLP LSKQLSLPNTDRRFGC GGIPW CGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCL
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCL

Query:  FCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        FCHKRI+EEDGRCPGCRKPYDRDPAD+ETNV GGSP F LARSCSMISRS
Subjt:  FCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

TrEMBL top hitse value%identityAlignment
A0A1S3BVJ1 uncharacterized protein LOC1034939476.6e-18895.13Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X21.5e-18795.11Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISR
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X25.6e-18795.1Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREI EENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

A0A6J1C357 uncharacterized protein LOC1110070164.4e-17690.83Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSI NASISLAP+ARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKT +DDNLSSKKINMREI  +N  SVHH SDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        S+SPSNSPPS+ SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDKQHDQCSESSPRG+ VSQLDSCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS ++ GRIAQRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPY+ DPAD+ETNVHGGSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

A0A6J1JM47 uncharacterized protein LOC1114856377.1e-17489.4Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNEEDNRLDS V+KT EDDNLSSKKIN REI EE+DRSVHHHSD 
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        S+SPSNSPPS+GSSILGGNDSG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE DDDCL+DWEA AD L ATDKQHDQCSESSPRG+VVSQL SCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS ++ GRIA+RASMN RAWRPDDA RPQSLPTLSKQLSLPNTDRRFGCG +PWACGGV+ VPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Subjt:  NELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETN H GSPTFPLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 41.8e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

P34909 General negative regulator of transcription subunit 43.7e-1050Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD

Q09818 Putative general negative regulator of transcription C16C9.04c1.4e-0948Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD

Q8BT14 CCR4-NOT transcription complex subunit 41.8e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein6.0e-1628.43Show/hide
Query:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGNDSG
        KKR  N   KLKQ K+D RR+QW+S+    N    E   RL S++ K  +     + +I+  +  E+++  +   S F+ SP        +S+L   DS 
Subjt:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPSIGSSILGGNDSG

Query:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRAS
                     S    C S  +TEEEEE    DD  D+W+   DAL + +  +++ S          + D   D+   +            +  Q A+
Subjt:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQRAS

Query:  MNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR
                       ++   S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y +
Subjt:  MNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein3.4e-1142.86Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD

AT3G48070.1 RING/U-box superfamily protein1.1e-6546.11Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VEENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE             +  + S+K + R++      ++E++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VEENDRSV

Query:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD
        H H  F +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++  E+ P        +
Subjt:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD

Query:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL
        SC    D +    +G  D  ++  +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Subjt:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL

Query:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM  RS
Subjt:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

AT3G48070.2 RING/U-box superfamily protein3.1e-6545.96Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VEENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE             +  + S+K + R++      ++E++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREI------VEENDRSV

Query:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD
        H H  F +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++  E+ P        +
Subjt:  HHHSDFSDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLD

Query:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL
        SC    D +    +G  D  ++  +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FL
Subjt:  SC---GDSRNELGVGDGDSGVQRGRI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFL

Query:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        PC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM  R
Subjt:  PCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR

AT5G62910.1 RING/U-box superfamily protein3.7e-6646.09Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF
        M+TDSI NAS + AP  RD    KK+  +++K+KQ+KL +RREQWLS+ AV NK+  EE +     V ++++  + SS K+  RE       ++ HH  F
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV
         +SPSNS        +GG  S  +F+G SS SS  SSSSG  SG+ITEEE  ++ DD C+DDWEA+ADALAA ++            +Q S      NV 
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV

Query:  SQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLP
            S  D+ + +GV D     +  R++ R   + RAWR DD  RPQ LP L+KQLS P  D+RF            +++P+SCPIC+EDLDLTDS+FLP
Subjt:  SQLDSCGDSRNELGVGDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLP

Query:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        C CGFRLCLFCHK I + DGRCPGCRKPY+R+    ET++ GG  T  LARS SM  +
Subjt:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAGTCCAA
GCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGTCATTAAAACGAGGGAAGATG
ATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGTAGAAGAGAACGATAGATCGGTTCACCACCATAGCGATTTTTCGGACTCGCCGTCTAATAGTCCTCCTAGT
ATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGCGGTTGTCGCTCGGGGAGTATAAC
GGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTT
CCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGACTCGGGTGTTCAGCGTGGGAGAATTGCGCAGAGG
GCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAACTTAGTTTACCAAATACAGACCGGCGTTTTGGATG
TGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGTCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTG
GATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAACGTA
CATGGCGGCAGCCCAACATTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
CGAAAATTTAGGAAATGAGAGGGATATTTTGGTAACTTGGTCGATATTTAAATGAAATCTCGGCCCTCTGTTTTTTTCCTAGTCTGTGGAAAAGAGCGAGCGAAGCAGAG
GAGTTTCCGTTATCCATTCTCTCTCTCTCTTTCTCTCCCCCGAAGATCTTCTCTCTCCCGGAAAAAATATCCACACAAATTAGGGTTTCTTTGTGACCTTCGTTCCTTCA
ATTCGATTCAACTCTTCAATCATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAA
TTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGG
TCATTAAAACGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGTAGAAGAGAACGATAGATCGGTTCACCACCATAGCGATTTTTCGGACTCG
CCGTCTAATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGCGG
TTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAAC
ATGATCAATGTTCCGAGTCTTCCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGACTCGGGTGTTCAG
CGTGGGAGAATTGCGCAGAGGGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAACTTAGTTTACCAAA
TACAGACCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGTCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACCTTACAGACTCAA
GTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGGAAGCCATATGATCGTGATCCT
GCCGACAATGAGACAAACGTACATGGCGGCAGCCCAACATTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTAATGTA
CGTCTGGTCTCACTTTTTTTTTTTCTTTTCTTTTTTGTTCCTGCGTCTCTTGGGTATTATGGTAGTCTTGGGCTCTGATTTTCATAGTAATAGAAGTGGCATTCGGGTGT
TGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGAACTGTTTCGTACATGAGTGTGGTTCTTATCTTATCGTACATTTGCCAATGTAGAGGACTTATTTCGTACTTAA
TATGTGAATAGACGAGGTGGTATAGAAATGAATACATGGAATAATGATATAACATTTGTTTTCTCCACTTCTTATTTATTTGTATTTGCATATATGCTGAAACTGTTCTA
TTTATCACTTTCCCCAGTCTTCCTTTGGTGTTCGGTAATTGAATGCAACATGTAAATAACATTTTCTCTAGAGTTAAACCTGAGCATGGATTGATATTGTAAGAATCTTT
AGTGCATCTTTCATTGGCTTATTGTTCATGATTATATTGAACCAACTCTTTAGCGTCAATGTTCAATGATTGAAACCCCCTATTGAAACTTTTTGGTTCTGGCCTGTTTT
AACTTTGCAGCCTTATCTTTATGTACCTTGATTCTTCTTAATGTAAGGGAAGAATGTGATCTTGGT
Protein sequenceShow/hide protein sequence
MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIVEENDRSVHHHSDFSDSPSNSPPS
IGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVGDGDSGVQRGRIAQR
ASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNV
HGGSPTFPLARSCSMISRS