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Clc06G18310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G18310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHomeobox protein knotted-1, putative
Genome locationClcChr06:28747390..28755991
RNA-Seq ExpressionClc06G18310
SyntenyClc06G18310
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587466.1 Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6761.39Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        MADLYGLHPLAD SY+SSSA  L +  +  N      AS+DYSH L  F S ++ +VSS   D    A        + E SAG IR KIASHPLYP+LVD
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---
        AFV+CQK+G PPE A+IL ++ RGSDIGE  S VS  LG DPELDEFMETY  ILAKY+LDLS  F+EASSFLNNM  QLN LCN       +DE A   
Subjt:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---

Query:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
         +E++SAGEVELQDSL    NEDRELKDRLLR+YGG++SSLKQEFSKTKKK  LP+E++
Subjt:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

XP_022928493.1 homeobox protein knotted-1-like 6 [Cucurbita moschata]8.7e-6861.39Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        MADLYGLHPLAD SY+SSSA  L +  +  N      AS+DYSH L  F S ++ +VSS   D    A        + E SAG IR KIASHPLYP+LVD
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---
        AFV+CQK+G PPE A+IL ++ RGSDIGE  S VS  LG DPELDEFMETY  ILAKY+LDLS  F+EASSFLNNM  QLN LCN       +DE A   
Subjt:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---

Query:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
         +E++SAGEVELQDSL    NEDRELKDRLLR+YGG++SSLKQEFSKTKKK  LP+E++
Subjt:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

XP_023004610.1 homeobox protein knotted-1-like 6 [Cucurbita maxima]2.1e-6962.16Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        MADLYGLHPLAD SY+SSSA  L +  +  N      ASADYSH L  F S ++ +VSS   D   A         + E SAG IR KIASHPLYP+LVD
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---
        AFV+CQK+G PPE A+IL ++ RG DIGE  SGVS CLG DPELDEFMETY  ILAKY+LDLS  F+EASSFLNNM  QL+ LCN       +DETA   
Subjt:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---

Query:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
         +E+ SAGEVELQDSL    NEDRELKDRLLR+YGG++SSLKQEFSKTKKK  LP+E++
Subjt:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

XP_023531461.1 homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo]8.7e-6861.39Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        MADLYGLHPLAD SY+SSSA  L +  +  N      AS+DYSH L  F S ++ +VSS   D    A        + E SAG IR KIASHPLYP+LVD
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---
        AFV+CQK+G PPE A+IL ++ RGSDIGE  S VS  LG DPELDEFMETY  ILAKY+LDLS  F+EASSFLNNM  QLN LCN       +DE A   
Subjt:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---

Query:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
         +E++SAGEVELQDSL    NEDRELKDRLLR+YGG++SSLKQEFSKTKKK  LP+E++
Subjt:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

XP_038878657.1 homeobox protein knotted-1-like 6 [Benincasa hispida]5.9e-10175Show/hide
Query:  MVHSHSTSTTAYALPLSLSTPLNNSSIFLSPLSTMADLYGLHPLADNSYQSSSATTLGSFPLLANSPMASADYSHLLPAFESEYLRTVSSAACDTVAAAA
        M HSH  ST AY LP+SLSTPLNNSSIFLSP STMADLYGLHPLAD+SYQSSSATTL S  L AN PMAS DYSHLLPAFESE LR VSSAA DT   AA
Subjt:  MVHSHSTSTTAYALPLSLSTPLNNSSIFLSPLSTMADLYGLHPLADNSYQSSSATTLGSFPLLANSPMASADYSHLLPAFESEYLRTVSSAACDTVAAAA

Query:  EIETARANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSD-IGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFME
        EIET RANSE SAG I+AKIASHPLYPKLVDAFVNCQKVG PPEF +I+DQNNRGSD IG+E SGVS  LG DPELDEFM TY  ILAK  LDLSQ  +E
Subjt:  EIETARANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSD-IGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFME

Query:  ASSFLNNMGMQLNVLCN-------NDETAPKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
        ASSFL NM M+LNVLCN       +DE A +E+ S GEV+  D L VPG+EDRELK RL R+YGGHI SLKQEFS+TK+K NLPREAK
Subjt:  ASSFLNNMGMQLNVLCN-------NDETAPKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

TrEMBL top hitse value%identityAlignment
A0A0A0LU96 Uncharacterized protein3.9e-6660.89Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARA-NSEYSAGVIRAKIASHPLYPKLVDAF
        MA LY L+ LA NS+ SSS TTL +  +     MAS+DYSH L  FESE+    SSAA +T   A +++TA A + E SAGVIRAKIASHPLYPKLVDAF
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARA-NSEYSAGVIRAKIASHPLYPKLVDAF

Query:  VNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA-PKENISAGEVE
        +NCQKV  PPE A ILDQ NRG++IG E  GVS CLG DPELDEFME +  +LAKYELDL Q   EAS+FL NM  QLN+LC +       +N +A E +
Subjt:  VNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA-PKENISAGEVE

Query:  LQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
        +     V GN+D ELK+RLLR+YGGHISSLKQEFSKTKKK  LP+EAK
Subjt:  LQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

A0A6J1BZ15 homeobox protein knotted-1-like 6 isoform X23.3e-6562.16Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLANS---PMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        M DLYGLH +AD S+QSSSA  L S    AN      ASAD SH LPAF SE L  VSSAA D  A   EI+ ARA  E SA  IRAKIASHPLYPKL++
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLANS---PMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQKVGVPPE-FADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLC-------NNDETA--
        AFV+CQKVG PPE   +ILD++ R +DI     GVS CLG DPELD FMETY  ILAKY+LDLS+  +EASSFLNNM MQLN LC        +DE    
Subjt:  AFVNCQKVGVPPE-FADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLC-------NNDETA--

Query:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
         +E++SAGE+ELQ+SL  P NED ELKDRLLR+Y GHISSLK EFSKTKK   LP+EA+
Subjt:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

A0A6J1BZH2 homeobox protein knotted-1-like 6 isoform X14.1e-6360.53Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLANS---PMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        M DLYGLH +AD S+QSSSA  L S    AN      ASAD SH LPAF SE L  VSSAA D  A   EI+ ARA  E SA  IRAKIASHPLYPKL++
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLANS---PMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQ-------KVGVPPE-FADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLC-------N
        AFV+CQ       KVG PPE   +ILD++ R +DI     GVS CLG DPELD FMETY  ILAKY+LDLS+  +EASSFLNNM MQLN LC        
Subjt:  AFVNCQ-------KVGVPPE-FADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLC-------N

Query:  NDETA--PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
        +DE     +E++SAGE+ELQ+SL  P NED ELKDRLLR+Y GHISSLK EFSKTKK   LP+EA+
Subjt:  NDETA--PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

A0A6J1EK44 homeobox protein knotted-1-like 64.2e-6861.39Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        MADLYGLHPLAD SY+SSSA  L +  +  N      AS+DYSH L  F S ++ +VSS   D    A        + E SAG IR KIASHPLYP+LVD
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---
        AFV+CQK+G PPE A+IL ++ RGSDIGE  S VS  LG DPELDEFMETY  ILAKY+LDLS  F+EASSFLNNM  QLN LCN       +DE A   
Subjt:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---

Query:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
         +E++SAGEVELQDSL    NEDRELKDRLLR+YGG++SSLKQEFSKTKKK  LP+E++
Subjt:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

A0A6J1KV29 homeobox protein knotted-1-like 61.0e-6962.16Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD
        MADLYGLHPLAD SY+SSSA  L +  +  N      ASADYSH L  F S ++ +VSS   D   A         + E SAG IR KIASHPLYP+LVD
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLAN---SPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKLVD

Query:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---
        AFV+CQK+G PPE A+IL ++ RG DIGE  SGVS CLG DPELDEFMETY  ILAKY+LDLS  F+EASSFLNNM  QL+ LCN       +DETA   
Subjt:  AFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCN-------NDETA---

Query:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
         +E+ SAGEVELQDSL    NEDRELKDRLLR+YGG++SSLKQEFSKTKKK  LP+E++
Subjt:  PKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

SwissProt top hitse value%identityAlignment
O04134 Homeobox protein knotted-1-like 13.7e-2940.22Show/hide
Query:  IRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLC
        I+AKI +HP Y  LV+A+++CQ+VG P +    L    +  +  +  SG S     DPELD+FME YY +L KY  +L++   EA  F+  +  QLN+L 
Subjt:  IRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLC

Query:  NNDETAP-------------------KENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
        NN+   P                   ++  S GE E+ +  + P  EDRELK+ LLR+Y G++SSLKQE SK KKK  LP+EA+
Subjt:  NNDETAP-------------------KENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

P46608 Homeobox protein SBH11.4e-2840.88Show/hide
Query:  ANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQ--NNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFL
        ++S  S+  ++AKI +HP Y +L+ A+VNCQKVG PPE    L++   +  +  G + +  S+C+G DP LD+FME Y  +L KYE +LS+   EA  FL
Subjt:  ANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQ--NNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFL

Query:  NNMGMQL-NVLCNNDETAPKE----NISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
          +  Q  N+  ++ + A  E    N S+ E     +++ P  EDR+LK +LLR+Y G++ SLKQEF K +KK  LP+EA+
Subjt:  NNMGMQL-NVLCNNDETAPKE----NISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

P46640 Homeobox protein knotted-1-like 21.1e-3641.26Show/hide
Query:  MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETAR-ANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVS
        M  +DY  L+ +   +  R   S    T  ++  +   R A   +S  VI++KIASHPLYP+L+  +++CQKVG P E A IL++  R + + +      
Subjt:  MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETAR-ANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVS

Query:  NCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA---PKENISAGEVELQDSLVVPGNE------DRELKDRLLREYGG
        +C G DPELDEFMETY  IL KY+ DL++ F EA++F+N + MQL  LC    +A     +   + + EL++   +  ++      DR+LKD+LLR++G 
Subjt:  NCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA---PKENISAGEVELQDSLVVPGNE------DRELKDRLLREYGG

Query:  HISSLKQEFSKTKKKANLPREAK
        HISSLK EFSK KKK  LPREA+
Subjt:  HISSLKQEFSKTKKKANLPREAK

Q38874 Homeobox protein SHOOT MERISTEMLESS1.5e-3042.93Show/hide
Query:  NSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNM
        +S  S+  ++AKI +HP Y +L+ A+VNCQKVG PPE    L++    +       G + CLG DP LD+FME Y  +L KYE +LS+ F EA  FL  +
Subjt:  NSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNM

Query:  GMQLNVLCNND--------ETAPKEN---ISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
          Q   L  +         ETA   N    S  EV++ +  V P  EDRELK +LLR+Y G++ SLKQEF K +KK  LP+EA+
Subjt:  GMQLNVLCNND--------ETAPKEN---ISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

Q84JS6 Homeobox protein knotted-1-like 62.7e-4041.67Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSP-----MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKL
        M  +Y  H   D  Y   S   +    L+  S       +SA  + +   F S+ L +V+ +A  + AA+   E  R +   S  VI+AKIA HP YP+L
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSP-----MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKL

Query:  VDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA--------
        + A+++CQKVG PPE A +L++  R SD+ ++    S+C G DPELDEFMETY  IL KY+ DL++ F EA+ FLN + MQL  LC   E+A        
Subjt:  VDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA--------

Query:  --PKENISAGEVELQDSLVVPGN---EDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
            E +S G+ E+ +     G    EDR+LKDRLLR++G  IS+LK EFSK KKK  LPREA+
Subjt:  --PKENISAGEVELQDSLVVPGN---EDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 61.9e-4141.67Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSP-----MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKL
        M  +Y  H   D  Y   S   +    L+  S       +SA  + +   F S+ L +V+ +A  + AA+   E  R +   S  VI+AKIA HP YP+L
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSP-----MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKL

Query:  VDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA--------
        + A+++CQKVG PPE A +L++  R SD+ ++    S+C G DPELDEFMETY  IL KY+ DL++ F EA+ FLN + MQL  LC   E+A        
Subjt:  VDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA--------

Query:  --PKENISAGEVELQDSLVVPGN---EDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
            E +S G+ E+ +     G    EDR+LKDRLLR++G  IS+LK EFSK KKK  LPREA+
Subjt:  --PKENISAGEVELQDSLVVPGN---EDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

AT1G23380.2 KNOTTED1-like homeobox gene 66.2e-4041.35Show/hide
Query:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSP-----MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKL
        M  +Y  H   D  Y   S   +    L+  S       +SA  + +   F S+ L +V+ +A  + AA+   E  R +   S  VI+AKIA HP YP+L
Subjt:  MADLYGLHPLADNSYQSSSATTLGSFPLLANSP-----MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSEYSAGVIRAKIASHPLYPKL

Query:  VDAFVNCQK--VGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA------
        + A+++CQK  VG PPE A +L++  R SD+ ++    S+C G DPELDEFMETY  IL KY+ DL++ F EA+ FLN + MQL  LC   E+A      
Subjt:  VDAFVNCQK--VGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA------

Query:  ----PKENISAGEVELQDSLVVPGN---EDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
              E +S G+ E+ +     G    EDR+LKDRLLR++G  IS+LK EFSK KKK  LPREA+
Subjt:  ----PKENISAGEVELQDSLVVPGN---EDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

AT1G62360.1 KNOX/ELK homeobox transcription factor1.1e-3142.93Show/hide
Query:  NSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNM
        +S  S+  ++AKI +HP Y +L+ A+VNCQKVG PPE    L++    +       G + CLG DP LD+FME Y  +L KYE +LS+ F EA  FL  +
Subjt:  NSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNM

Query:  GMQLNVLCNND--------ETAPKEN---ISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
          Q   L  +         ETA   N    S  EV++ +  V P  EDRELK +LLR+Y G++ SLKQEF K +KK  LP+EA+
Subjt:  GMQLNVLCNND--------ETAPKEN---ISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 27.6e-3841.26Show/hide
Query:  MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETAR-ANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVS
        M  +DY  L+ +   +  R   S    T  ++  +   R A   +S  VI++KIASHPLYP+L+  +++CQKVG P E A IL++  R + + +      
Subjt:  MASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETAR-ANSEYSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVS

Query:  NCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA---PKENISAGEVELQDSLVVPGNE------DRELKDRLLREYGG
        +C G DPELDEFMETY  IL KY+ DL++ F EA++F+N + MQL  LC    +A     +   + + EL++   +  ++      DR+LKD+LLR++G 
Subjt:  NCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDETA---PKENISAGEVELQDSLVVPGNE------DRELKDRLLREYGG

Query:  HISSLKQEFSKTKKKANLPREAK
        HISSLK EFSK KKK  LPREA+
Subjt:  HISSLKQEFSKTKKKANLPREAK

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana9.3e-2839.56Show/hide
Query:  IRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVS-NCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVL
        ++AKI +HP Y  L+ A+++CQK+G PP+  D +    +  +  ++ S  S +    DPELD+FME Y  +L KY  +L++   EA  F+  +  QL++L
Subjt:  IRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVS-NCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVL

Query:  C-------NNDE---------TAPKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK
        C       NN +            +EN S GE EL +  + P  EDRELK+ LL++Y G++SSLKQE SK KKK  LP+EA+
Subjt:  C-------NNDE---------TAPKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCACAGTCACAGTACCAGTACCACGGCCTACGCCCTACCCCTCTCTCTCTCTACGCCTCTAAATAATTCTTCCATTTTTCTCTCTCCGCTGTCGACCATGGCGGA
TCTTTACGGACTCCATCCCCTCGCTGATAACTCTTACCAGTCATCTTCAGCGACGACGTTGGGTAGCTTTCCTCTTCTTGCTAATTCTCCAATGGCTTCTGCAGATTATT
CTCATCTACTTCCTGCTTTTGAATCGGAATATTTGCGGACGGTTTCGTCGGCCGCCTGCGACACCGTTGCGGCGGCGGCTGAGATTGAAACAGCGCGAGCTAATTCCGAG
TACTCCGCCGGTGTAATTCGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAACTCGTCGATGCGTTCGTGAACTGCCAAAAGGTCGGTGTACCGCCGGAGTTCGCTGA
TATTCTAGACCAAAACAACCGTGGAAGTGATATCGGCGAAGAAATTTCCGGCGTTTCAAATTGCTTGGGTGTCGATCCCGAACTCGATGAGTTCATGGAAACATACTACA
GGATACTAGCCAAATACGAGTTAGATCTCTCCCAGTCCTTCATGGAAGCATCTTCCTTTCTCAACAACATGGGAATGCAGTTAAACGTGCTTTGCAATAACGATGAAACT
GCTCCGAAAGAGAATATAAGCGCCGGAGAAGTAGAATTACAAGACTCTCTTGTGGTTCCGGGAAATGAAGATCGCGAGCTGAAGGATCGACTTTTGCGGGAGTACGGTGG
TCATATTAGTAGCTTAAAGCAGGAATTCTCAAAAACCAAAAAGAAGGCAAATCTGCCGAGAGAAGCCAAATAG
mRNA sequenceShow/hide mRNA sequence
GAATGTCAGACAGTCTGACTCCCACTCGCCGTAGCTCTCTAGATGGTTCACAGTCACAGTACCAGTACCACGGCCTACGCCCTACCCCTCTCTCTCTCTACGCCTCTAAA
TAATTCTTCCATTTTTCTCTCTCCGCTGTCGACCATGGCGGATCTTTACGGACTCCATCCCCTCGCTGATAACTCTTACCAGTCATCTTCAGCGACGACGTTGGGTAGCT
TTCCTCTTCTTGCTAATTCTCCAATGGCTTCTGCAGATTATTCTCATCTACTTCCTGCTTTTGAATCGGAATATTTGCGGACGGTTTCGTCGGCCGCCTGCGACACCGTT
GCGGCGGCGGCTGAGATTGAAACAGCGCGAGCTAATTCCGAGTACTCCGCCGGTGTAATTCGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAACTCGTCGATGCGTT
CGTGAACTGCCAAAAGGTCGGTGTACCGCCGGAGTTCGCTGATATTCTAGACCAAAACAACCGTGGAAGTGATATCGGCGAAGAAATTTCCGGCGTTTCAAATTGCTTGG
GTGTCGATCCCGAACTCGATGAGTTCATGGAAACATACTACAGGATACTAGCCAAATACGAGTTAGATCTCTCCCAGTCCTTCATGGAAGCATCTTCCTTTCTCAACAAC
ATGGGAATGCAGTTAAACGTGCTTTGCAATAACGATGAAACTGCTCCGAAAGAGAATATAAGCGCCGGAGAAGTAGAATTACAAGACTCTCTTGTGGTTCCGGGAAATGA
AGATCGCGAGCTGAAGGATCGACTTTTGCGGGAGTACGGTGGTCATATTAGTAGCTTAAAGCAGGAATTCTCAAAAACCAAAAAGAAGGCAAATCTGCCGAGAGAAGCCA
AATAGATCCTGCTTCACTGGTGGAACAGCCATTCCCAGTGGCCATATCCCACTGACACAGAAAAGGTTGAGTTGGCCGAGTCGACAGGCCTAACCCGAAAACAAATAAAC
AACTGGTTCATAAACCAGAGGAAACGGCATTGGAAATCACCATAATTTGCTGTTGTGTATGGTCTTAAACGGTCCCCTCATAATTGATGAATGAGTTGGTTCGTTCCCCC
TTTTCATTGTCAAGTTGTTCATGTGTATTTTTCTGGATCAGTGTAATGAGAATTTTTATAGCCTTTACCTTAAATTGTGCGAGCCACTCTTGATTGTAACGAACCCTCTG
GTATAGTTAGTCAATAATTTATTGTCTAGTTACTTGCTCATCTTATATGATCTTGATTCCCTCTGAGTTGGAGTAGAGTGTATGGCTCTCGTAGCTTAATTAGATTTGTA
AAGTTCTCACAGTACTACATGTAATTAAAAGTTTGGGACTTTTCTACTTGCAGACTACAGATCCTCAAGGTTTTCATTTCTGAGTTGCACGAAGTCGAATCTGTTTAAAT
TGTAATGTTA
Protein sequenceShow/hide protein sequence
MVHSHSTSTTAYALPLSLSTPLNNSSIFLSPLSTMADLYGLHPLADNSYQSSSATTLGSFPLLANSPMASADYSHLLPAFESEYLRTVSSAACDTVAAAAEIETARANSE
YSAGVIRAKIASHPLYPKLVDAFVNCQKVGVPPEFADILDQNNRGSDIGEEISGVSNCLGVDPELDEFMETYYRILAKYELDLSQSFMEASSFLNNMGMQLNVLCNNDET
APKENISAGEVELQDSLVVPGNEDRELKDRLLREYGGHISSLKQEFSKTKKKANLPREAK