; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G18330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G18330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUro-adherence factor A
Genome locationClcChr06:28772929..28774161
RNA-Seq ExpressionClc06G18330
SyntenyClc06G18330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5217835.1 unnamed protein product, partial [Bursaphelenchus okinawaensis]5.7e-1453.67Show/hide
Query:  RPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSR
        +P  SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS SL+LSLSLSLSL LS S S S SLS S S S SLS S S S SLS S S S 
Subjt:  RPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSR

Query:  SRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLS
        S S S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS
Subjt:  SRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLS

Query:  YSHSRPLAHILTLQHKLN
         S S  L+  L+L   L+
Subjt:  YSHSRPLAHILTLQHKLN

CAD5222584.1 unnamed protein product, partial [Bursaphelenchus okinawaensis]9.7e-1453.92Show/hide
Query:  PYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRS
        P  SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS SL+LSLSLSLSL LS S S S SLS S S S SLS S S S SLS S S S S
Subjt:  PYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRS

Query:  RSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSY
         S S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS 
Subjt:  RSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSY

Query:  SHSRPLAHILTLQHKLN
        S S  L+  L+L   L+
Subjt:  SHSRPLAHILTLQHKLN

CAD5226571.1 unnamed protein product, partial [Bursaphelenchus okinawaensis]1.5e-1454.67Show/hide
Query:  SLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSG
        SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS SL+LSLSLSLSL LS S S S SLS S S S SLS S S SPSLS S S S S S 
Subjt:  SLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSG

Query:  SRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHS
        S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS S S
Subjt:  SRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHS

Query:  RPLAHILTLQHKLN
          L+  L+L   L+
Subjt:  RPLAHILTLQHKLN

KAF5795361.1 hypothetical protein HanXRQr2_Chr08g0338771 [Helianthus annuus]2.5e-1454.21Show/hide
Query:  SLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSG
        SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS SL+LSLSLSLSL LS S S S SLS S S S SLS S S S SLS S S S S S 
Subjt:  SLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSG

Query:  SRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHS
        S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS S S
Subjt:  SRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHS

Query:  RPLAHILTLQHKLN
          L+  L+L   L+
Subjt:  RPLAHILTLQHKLN

OLQ03468.1 Protein FAM186A [Symbiodinium microadriaticum]5.7e-1447.41Show/hide
Query:  IREIGARLSATWTMSSSFPLRPFKNWALRTSKRVVFRGISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSR
        I E    LS + ++S S  L    + +L  S  +      S+S    L        SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS 
Subjt:  IREIGARLSATWTMSSSFPLRPFKNWALRTSKRVVFRGISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSR

Query:  SLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAP
        SL+LSLSLSLSL LS S S S SLS S S S SLS S S S SLS S S S S S S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ 
Subjt:  SLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAP

Query:  AFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLN
        + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS S S  L+  L+L   L+
Subjt:  AFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLN

TrEMBL top hitse value%identityAlignment
A0A1Q9D5W2 Uncharacterized protein1.0e-1354.17Show/hide
Query:  SLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSG
        SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS SL+LSLSLSLSL LS S S S SLS S S S SLS S S S SLS S S S S S 
Subjt:  SLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSG

Query:  SRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHS
        S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS S S
Subjt:  SRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHS

Query:  RPLAHILTLQHKLNRE
          L+  L+L   L+ E
Subjt:  RPLAHILTLQHKLNRE

A0A1Q9E7R6 Protein FAM186A2.7e-1447.41Show/hide
Query:  IREIGARLSATWTMSSSFPLRPFKNWALRTSKRVVFRGISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSR
        I E    LS + ++S S  L    + +L  S  +      S+S    L        SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS 
Subjt:  IREIGARLSATWTMSSSFPLRPFKNWALRTSKRVVFRGISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSR

Query:  SLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAP
        SL+LSLSLSLSL LS S S S SLS S S S SLS S S S SLS S S S S S S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ 
Subjt:  SLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAP

Query:  AFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLN
        + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS S S  L+  L+L   L+
Subjt:  AFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLN

A0A4W3H3T7 Uncharacterized protein3.0e-1345.19Show/hide
Query:  LSATWTMSSSFPLRPFKNWALRTSKRVVFRGISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSR----SLALSLSRSLA
        LS T ++S + PL    + ++  S  +      S+S    L        +L++ L+LSL+ SLS SL LS SL LS SL+LSLS     SL+LSLS +L+
Subjt:  LSATWTMSSSFPLRPFKNWALRTSKRVVFRGISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSR----SLALSLSRSLA

Query:  LS---LSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAP
        LS   LSLSLSL L  S S S SLS S S S SLS S S S +LS S S S S S   S SL+L+ +L LSLS S SP P+L+L+L  +L+ SL  +L+ 
Subjt:  LS---LSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAP

Query:  AFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLN
        + +L   S SL L L+L+L +SL L  S S S SL+L+L L L + + +SLS SHS  L+  L+L H L+
Subjt:  AFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLN

J3LGE7 Protein kinase domain-containing protein4.7e-1453.92Show/hide
Query:  PYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRS
        P  SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS SL+LSLSLSLSL LS S S S SLS S S S SLS S S S SLS S S S S
Subjt:  PYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRS

Query:  RSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSY
         S S S SL+L+ +L LSLSLS S + +L+L+L  +L+ SL  +L+ + +L S S SL+L L+L+L +SL L  S S S SL+L+L+L+L + +++SLS 
Subjt:  RSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-SLFGALAPAFALGSRSCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSY

Query:  SHSRPLAHILTLQHKLN
        S S  L+  L+L   L+
Subjt:  SHSRPLAHILTLQHKLN

J3MM24 Uncharacterized protein1.2e-1450.62Show/hide
Query:  ISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSR
        +S +SP   L        SL+++L+LSLS SLS SL+LS SL LS SL+LSLS SL+LSLS SL+LSLSLSLSL LS S S S SLS S S S SLS S 
Subjt:  ISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLALSLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSR

Query:  SRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-----SLFGALAPAFALG-SRSCSLALDLALTLWISLLLFGSQSRSR
        S S SLS S S S S S S S SL+L+ +L LSLSLS S + +L+L+L  +L+     SL  +L+ + +L  S S SL+L L+L+L +SL L  S S S 
Subjt:  SRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALA-----SLFGALAPAFALG-SRSCSLALDLALTLWISLLLFGSQSRSR

Query:  SLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLNRERE
        SL+L+L+L+L + +++SLS S S  L+  L+L   L   RE
Subjt:  SLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLNRERE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGGAGAAGTATATAAGGGTTGGGCGCTCTGACACGATTCGCGAGATTGGAGCTCGATTATCAGCTACTTGGACGATGAGTAGTTCGTTTCCTCTTCGACCGTT
CAAGAATTGGGCCCTCCGAACCTCGAAACGGGTCGTCTTCAGGGGAATCTCCTCAGTCTCTCCAGAAGGTGAACTAGGAAGGTATTGCCGACCATATTGCTCTTTGGCTG
TGGCTCTCGCTCTCTCGCTTTCTGGCTCTCTCTCTGGCTCTCTGGCTCTCTCTGGCTCTCTCTGGCTCTCTCGCTCTCTGGCTCTCTCGCTCTCTCGCTCTCTGGCTCTC
TCGCTCTCTCGCTCTCTGGCGCTCTCGCTCTCGCTCTCGCTCTCGCTCCCGCTCTCGCGCTCCCGCTCCCGCTCTCCCTCCCTCTCGGGCTCCCGCTCCCGCTCTCCCTC
CCTCTCGGGCTCCCGCTCCCGCTCTCCCTCCCTCTCGGGCTCCCGCTCTCGCTCTCGCTCCCGCTCGGGCTCCCGCTCTCGCTCTCTGGCTCTCGCTTTCGCTCTCTGGC
TCTCGCTTTCGCTCTCTGGCTCTCCGGCTCCAGCCCTCGCCCTCGCCCTCGGCCGGGCCCTTGCCTCGCTCTTCGGCGCGCTTGCTCCCGCTTTTGCTTTGGGCTCCCGC
TCTTGCTCTCTTGCTCTCGATCTTGCTCTCACTCTTTGGATCTCACTCCTGCTCTTTGGATCTCAATCACGATCTCGCTCTCTGACTTTGACTCTGACTCTCGCTCTTCG
GATCTTAATCACGATCTCGCTCTCTTACTCTCACTCTCGCCCTTTGGCTCACATTCTCACTCTGCAACACAAATTGAACAGAGAGAGAGAGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGGAGAAGTATATAAGGGTTGGGCGCTCTGACACGATTCGCGAGATTGGAGCTCGATTATCAGCTACTTGGACGATGAGTAGTTCGTTTCCTCTTCGACCGTT
CAAGAATTGGGCCCTCCGAACCTCGAAACGGGTCGTCTTCAGGGGAATCTCCTCAGTCTCTCCAGAAGGTGAACTAGGAAGGTATTGCCGACCATATTGCTCTTTGGCTG
TGGCTCTCGCTCTCTCGCTTTCTGGCTCTCTCTCTGGCTCTCTGGCTCTCTCTGGCTCTCTCTGGCTCTCTCGCTCTCTGGCTCTCTCGCTCTCTCGCTCTCTGGCTCTC
TCGCTCTCTCGCTCTCTGGCGCTCTCGCTCTCGCTCTCGCTCTCGCTCCCGCTCTCGCGCTCCCGCTCCCGCTCTCCCTCCCTCTCGGGCTCCCGCTCCCGCTCTCCCTC
CCTCTCGGGCTCCCGCTCCCGCTCTCCCTCCCTCTCGGGCTCCCGCTCTCGCTCTCGCTCCCGCTCGGGCTCCCGCTCTCGCTCTCTGGCTCTCGCTTTCGCTCTCTGGC
TCTCGCTTTCGCTCTCTGGCTCTCCGGCTCCAGCCCTCGCCCTCGCCCTCGGCCGGGCCCTTGCCTCGCTCTTCGGCGCGCTTGCTCCCGCTTTTGCTTTGGGCTCCCGC
TCTTGCTCTCTTGCTCTCGATCTTGCTCTCACTCTTTGGATCTCACTCCTGCTCTTTGGATCTCAATCACGATCTCGCTCTCTGACTTTGACTCTGACTCTCGCTCTTCG
GATCTTAATCACGATCTCGCTCTCTTACTCTCACTCTCGCCCTTTGGCTCACATTCTCACTCTGCAACACAAATTGAACAGAGAGAGAGAGAGATAG
Protein sequenceShow/hide protein sequence
MGWEKYIRVGRSDTIREIGARLSATWTMSSSFPLRPFKNWALRTSKRVVFRGISSVSPEGELGRYCRPYCSLAVALALSLSGSLSGSLALSGSLWLSRSLALSLSRSLAL
SLSRSLALSLSLSLSLPLSRSRSRSPSLSGSRSRSPSLSGSRSRSPSLSGSRSRSRSRSGSRSRSLALAFALWLSLSLSGSPAPALALALGRALASLFGALAPAFALGSR
SCSLALDLALTLWISLLLFGSQSRSRSLTLTLTLALRILITISLSYSHSRPLAHILTLQHKLNRERER