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Clc06G18610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G18610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionU-box domain-containing protein 33-like
Genome locationClcChr06:29007917..29011911
RNA-Seq ExpressionClc06G18610
SyntenyClc06G18610
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR014729 - Rossmann-like alpha/beta/alpha sandwich fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057823.1 U-box domain-containing protein 33-like [Cucumis melo var. makuwa]2.0e-6166.51Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLE NTTAKAILQL      T                               + E T      + N  ++EMGLLPSS+ SD  R+RRSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL E VCLSS+S CD
Subjt:  NLLEWVCLSSRSGCD

XP_004138091.1 U-box domain-containing protein 52 [Cucumis sativus]8.8e-6266.51Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLESNTTAKAILQL      T                               + E T      + N  ++EMGLLPSS+DS   R++RSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL E VCLSS+S CD
Subjt:  NLLEWVCLSSRSGCD

XP_022135422.1 U-box domain-containing protein 33-like [Momordica charantia]5.5e-6468.37Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V +  ESKTIISSRD GA DVYVAVGKDDIDVLKWALDH VSPGCCVFLVHVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT--WEKNR---KRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLESNTTAKAILQL      T                               F E T  +E  +   +++EMGLLPSS+ S+C RRRRSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT--WEKNR---KRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL EWVCLSSRSG D
Subjt:  NLLEWVCLSSRSGCD

XP_038876192.1 U-box domain-containing protein 33-like [Benincasa hispida]3.8e-6563.91Show/hide
Query:  ESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEEN
        E  +  C+       +V +  ESK+IISSRD GATDVYVAVGKDDIDVLKWAL+H V+PGCCVFLVHVFPPLT I TPVGRLARSQLSQEQLRVYINEEN
Subjt:  ESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEEN

Query:  NRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLP
        NRRRNLLQKYIRLCTD+KVTVDTLLLESNTTAKAILQL      T                               F E T      + + +++EMGLL 
Subjt:  NRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLP

Query:  SSEDSDCRRRRRSGKNLLEWVCLSSRSGCD
        SS+DSDC RRRRSGKNL EWVCLS RSGCD
Subjt:  SSEDSDCRRRRRSGKNLLEWVCLSSRSGCD

XP_038879425.1 U-box domain-containing protein 33-like [Benincasa hispida]3.8e-6561.04Show/hide
Query:  EEKLEKTIQLLEESLVAA-------CATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGR
        E K E+ +++ EE    A       C+       ++ + +ESKTIISSRDG ATDVYVAVGKDDIDVL+WALDH VSPGCCVFLVHVFPPLT I+TPVGR
Subjt:  EEKLEKTIQLLEESLVAA-------CATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGR

Query:  LARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT
        LARSQLSQEQLRVY NEENNRRRNLLQKYIRLCTD+KV+VD LLLESNTTAKAILQL      T                               F E T
Subjt:  LARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT

Query:  WEKNRKR-----REMGLLPSSEDSDCRRRRRSGKNLLEWVCLSSRSGCD
             K+     REMGLLPSSEDSDC+ RRRS KNL EWVCLSSRSGC+
Subjt:  WEKNRKR-----REMGLLPSSEDSDCRRRRRSGKNLLEWVCLSSRSGCD

TrEMBL top hitse value%identityAlignment
A0A0A0LNU1 Uncharacterized protein4.3e-6266.51Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLESNTTAKAILQL      T                               + E T      + N  ++EMGLLPSS+DS   R++RSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL E VCLSS+S CD
Subjt:  NLLEWVCLSSRSGCD

A0A1S3CN70 U-box domain-containing protein 33-like2.1e-6166.05Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLE NTTAKAILQL      T                               + E T      + N  ++EMGLLPSS+ SD  ++RRSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL E VCLSS+S CD
Subjt:  NLLEWVCLSSRSGCD

A0A5A7UPM8 U-box domain-containing protein 33-like9.5e-6266.51Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLE NTTAKAILQL      T                               + E T      + N  ++EMGLLPSS+ SD  R+RRSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL E VCLSS+S CD
Subjt:  NLLEWVCLSSRSGCD

A0A5D3BHA8 U-box domain-containing protein 33-like2.1e-6166.05Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V + +ESKTIISSRDGGATDVYVAVGKDDIDVLKWALDH VSPGCCVFL+HVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLE NTTAKAILQL      T                               + E T      + N  ++EMGLLPSS+ SD  ++RRSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT-----WEKNRKRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL E VCLSS+S CD
Subjt:  NLLEWVCLSSRSGCD

A0A6J1C2N1 U-box domain-containing protein 33-like2.7e-6468.37Show/hide
Query:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
        +V +  ESKTIISSRD GA DVYVAVGKDDIDVLKWALDH VSPGCCVFLVHVFPPLT I TPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT
Subjt:  LVPMTNESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCT

Query:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT--WEKNR---KRREMGLLPSSEDSDCRRRRRSGK
        D+KVTVDTLLLESNTTAKAILQL      T                               F E T  +E  +   +++EMGLLPSS+ S+C RRRRSGK
Subjt:  DSKVTVDTLLLESNTTAKAILQLFQDQKAT-------------------------------FHEAT--WEKNR---KRREMGLLPSSEDSDCRRRRRSGK

Query:  NLLEWVCLSSRSGCD
        NL EWVCLSSRSG D
Subjt:  NLLEWVCLSSRSGCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G61390.1 RING/U-box superfamily protein3.1e-0424.03Show/hide
Query:  TIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDID---VLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQ
        T+++  + +V    +  S+ I +P + E    I+ ++     +YVAV + D++    L WA+ +      C+  VHV  P          +      +++
Subjt:  TIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDID---VLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQ

Query:  LRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT
        LR+Y  E++   +N  +KY+++C   +VT + + +E+++  K ILQL   +  T
Subjt:  LRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT

AT3G61390.2 RING/U-box superfamily protein3.1e-0424.03Show/hide
Query:  TIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDID---VLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQ
        T+++  + +V    +  S+ I +P + E    I+ ++     +YVAV + D++    L WA+ +      C+  VHV  P          +      +++
Subjt:  TIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVYVAVGKDDID---VLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQ

Query:  LRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT
        LR+Y  E++   +N  +KY+++C   +VT + + +E+++  K ILQL   +  T
Subjt:  LRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKAT

AT5G47740.1 Adenine nucleotide alpha hydrolases-like superfamily protein1.3e-1843.12Show/hide
Query:  GATDVYVAVGKDD--IDVLKWALDHVV-SPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESN
        G  +VYV VGK D  ++ L+WA+D+++ S    +FL+HVFP    I  P+GR+ R + SQEQ+  ++++E  +RR LL K++  C+ SKV V+T+L+ES+
Subjt:  GATDVYVAVGKDD--IDVLKWALDHVV-SPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESN

Query:  TTAKAILQL
        + AKA+  L
Subjt:  TTAKAILQL

AT5G47740.2 Adenine nucleotide alpha hydrolases-like superfamily protein4.1e-1742.34Show/hide
Query:  GATDVYVAVGKDD--IDVLKWALDHVV-SPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSK--VTVDTLLLE
        G  +VYV VGK D  ++ L+WA+D+++ S    +FL+HVFP    I  P+GR+ R + SQEQ+  ++++E  +RR LL K++  C+ SK  V V+T+L+E
Subjt:  GATDVYVAVGKDD--IDVLKWALDHVV-SPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSK--VTVDTLLLE

Query:  SNTTAKAILQL
        S++ AKA+  L
Subjt:  SNTTAKAILQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGAGAAGAGAACAAAACAAAGTATGGAAATTACTCGGTCGGTGCCAATAATGATGGGCCTCGAGGCCCAATACAAATCGGCCGTGGGCTTACGGTCGAATTGGA
CGAGATCCAAAATTTAGGCCCATTTACACAATCGGGAGATGAGGCTTATCTTGTTGTTTTGAAGAAAAATGAAGAGAAGTTAGAAAAGACTATACAGCTTCTCGAAGAAT
CTCTAGTGGCTGCATGTGCCACCACATCATCATATTCTATATTGGTCCCCATGACAAACGAAAGTAAGACTATTATTAGTAGCAGAGACGGCGGGGCAACCGATGTCTAC
GTCGCCGTCGGTAAAGATGACATAGATGTGCTTAAATGGGCCCTTGATCATGTTGTCTCACCTGGTTGTTGTGTATTTCTTGTCCATGTTTTTCCTCCTCTCACCTGTAT
CACTACACCAGTTGGAAGATTAGCAAGGAGTCAACTAAGCCAAGAACAATTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTATTGCAAAAATACATCC
GCTTATGCACTGATTCCAAGGTGACAGTGGACACATTGCTTTTGGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTATTCCAGGACCAAAAAGCCACTTTCCACGAA
GCTACTTGGGAAAAGAATCGCAAAAGGAGAGAAATGGGGTTGCTTCCTTCTTCTGAAGATTCCGATTGCCGGCGGCGGCGACGCTCTGGGAAGAACTTGTTAGAGTGGGT
CTGCTTGTCGAGCAGGTCGGGTTGCGATTAA
mRNA sequenceShow/hide mRNA sequence
AAGCACCTCCGCCTCCTCTTTCTCGGCCATAGTATGGAACTGGAGGAGGTTGATAGCCTTTGTACAAGGATTCACGCCCTACTATTGGCGGTGGCGCAGCAGGCTGTAAA
CCCACTAGGTCACTGCGCAAGAAATATCAAAAGTCACCCAGAAAAGGGTAGAGAGATCAGAAACACCATAGAGAAATCAAGGATAAGAAGGAGAGCTTCAAAGTACGAAC
ATTACCTTCGGCGCTCGCGGTAGGAATTGGGATCGGCGTATCTATGGTCATAAGGATTCATGACTCTAGGATTTCGAAAGTGGAAGAAACGGAGTAGTCTAGTTCAGTGG
TGGAATTTGAAACGGAAGATACCCGACCGGCCGTAGCCTTCAGAATTTCTTACTATTCCGGTTCGAAGTATTCAAGATCTACAGGCAAGAAGAGGAAGAAGAAGGGTCCA
TGTTTAGAGAAGAGAACAAAACAAAGTATGGAAATTACTCGGTCGGTGCCAATAATGATGGGCCTCGAGGCCCAATACAAATCGGCCGTGGGCTTACGGTCGAATTGGAC
GAGATCCAAAATTTAGGCCCATTTACACAATCGGGAGATGAGGCTTATCTTGTTGTTTTGAAGAAAAATGAAGAGAAGTTAGAAAAGACTATACAGCTTCTCGAAGAATC
TCTAGTGGCTGCATGTGCCACCACATCATCATATTCTATATTGGTCCCCATGACAAACGAAAGTAAGACTATTATTAGTAGCAGAGACGGCGGGGCAACCGATGTCTACG
TCGCCGTCGGTAAAGATGACATAGATGTGCTTAAATGGGCCCTTGATCATGTTGTCTCACCTGGTTGTTGTGTATTTCTTGTCCATGTTTTTCCTCCTCTCACCTGTATC
ACTACACCAGTTGGAAGATTAGCAAGGAGTCAACTAAGCCAAGAACAATTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTATTGCAAAAATACATCCG
CTTATGCACTGATTCCAAGGTGACAGTGGACACATTGCTTTTGGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTATTCCAGGACCAAAAAGCCACTTTCCACGAAG
CTACTTGGGAAAAGAATCGCAAAAGGAGAGAAATGGGGTTGCTTCCTTCTTCTGAAGATTCCGATTGCCGGCGGCGGCGACGCTCTGGGAAGAACTTGTTAGAGTGGGTC
TGCTTGTCGAGCAGGTCGGGTTGCGATTAA
Protein sequenceShow/hide protein sequence
MFREENKTKYGNYSVGANNDGPRGPIQIGRGLTVELDEIQNLGPFTQSGDEAYLVVLKKNEEKLEKTIQLLEESLVAACATTSSYSILVPMTNESKTIISSRDGGATDVY
VAVGKDDIDVLKWALDHVVSPGCCVFLVHVFPPLTCITTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDSKVTVDTLLLESNTTAKAILQLFQDQKATFHE
ATWEKNRKRREMGLLPSSEDSDCRRRRRSGKNLLEWVCLSSRSGCD