; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G18660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G18660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionocticosapeptide/Phox/Bem1p (PB1) domain-containing protein
Genome locationClcChr06:29033831..29035196
RNA-Seq ExpressionClc06G18660
SyntenyClc06G18660
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138082.1 uncharacterized protein LOC101222072 [Cucumis sativus]6.1e-8291.91Show/hide
Query:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
        M+S AR   +GTLKFLCSYGGKILPRQTDGKLRYVGG TRVLAVERS+SFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
Subjt:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS

Query:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        SL HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYG DSLP+SPQYG ++RISSPSYRFIRRIPSPPSKYF
Subjt:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

XP_008464503.1 PREDICTED: uncharacterized protein LOC103502365 [Cucumis melo]6.1e-8291.91Show/hide
Query:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
        M+S AR   +GTLKFLCSYGGKILPRQTDGKLRYVGG TRVLAVERS+SFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
Subjt:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS

Query:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        SL HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYG DSLP+SPQYG ++RISSPSYRFIRRIPSPPSKYF
Subjt:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

XP_022987245.1 uncharacterized protein LOC111484856 [Cucurbita maxima]2.6e-8089.41Show/hide
Query:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL
        M+SDARTGTLKFLCSYGGKILPR+TDGKLRYVGG TRVLAV+RS+S+SELMVKLGEFCGS+VTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSL 
Subjt:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL

Query:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        HPL+IRAILSPPKSLKQISPPSSVD TLPNSPC+GVDSLP+SPQYG+NDRISSPS RF R+I SPP+KYF
Subjt:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

XP_023515548.1 uncharacterized protein LOC111779672 [Cucurbita pepo subsp. pepo]2.0e-8090Show/hide
Query:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL
        M+SDARTGTLKFLCSYGGKILPR+TDGKLRYVGG TRVLAV+RS+S+SELMVKLGEFCGS+VTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSL 
Subjt:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL

Query:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        HPL+IRAILSPPKSLKQISPPSSVD TLPNSPC+GVDSLP+SPQYGINDRISSPS RF R+I SPP+KYF
Subjt:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

XP_038878416.1 uncharacterized protein LOC120070656 [Benincasa hispida]1.9e-8393.06Show/hide
Query:  MKSDA---RTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
        M+SD+   R+GTLKFLCSYGGKILPRQTDGKLRYVGG TRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISV SDEDLANIVEEYDRASS
Subjt:  MKSDA---RTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS

Query:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        SLLHPLKIRAILSPPKSLK+ISPPSSVDSTLPNSPCYGVDSLP+SPQYGIN+RISSPSYRFIR+IPSPPSKYF
Subjt:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

TrEMBL top hitse value%identityAlignment
A0A0A0LNT0 PB1 domain-containing protein3.0e-8291.91Show/hide
Query:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
        M+S AR   +GTLKFLCSYGGKILPRQTDGKLRYVGG TRVLAVERS+SFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
Subjt:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS

Query:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        SL HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYG DSLP+SPQYG ++RISSPSYRFIRRIPSPPSKYF
Subjt:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

A0A1S3CLS3 uncharacterized protein LOC1035023653.0e-8291.91Show/hide
Query:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
        M+S AR   +GTLKFLCSYGGKILPRQTDGKLRYVGG TRVLAVERS+SFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
Subjt:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS

Query:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        SL HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYG DSLP+SPQYG ++RISSPSYRFIRRIPSPPSKYF
Subjt:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

A0A5D3BH99 Octicosapeptide/Phox/Bem1p family protein3.0e-8291.91Show/hide
Query:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
        M+S AR   +GTLKFLCSYGGKILPRQTDGKLRYVGG TRVLAVERS+SFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS
Subjt:  MKSDAR---TGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASS

Query:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        SL HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYG DSLP+SPQYG ++RISSPSYRFIRRIPSPPSKYF
Subjt:  SLLHPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

A0A6J1HMN8 uncharacterized protein LOC1114649833.6e-8089.41Show/hide
Query:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL
        M+SDARTGTLKFLCSYGGKILPR+TDGKLRYVGG TRVLAV+RS+S+SELMVKLGEFCGS+VTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSL 
Subjt:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL

Query:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        HPL+IRAILSPPKSLKQISPPSSVD TLPNSPC+GVDSLP+SPQYGI+DRISSPS RF R+I SPP+KYF
Subjt:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

A0A6J1JGA5 uncharacterized protein LOC1114848561.2e-8089.41Show/hide
Query:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL
        M+SDARTGTLKFLCSYGGKILPR+TDGKLRYVGG TRVLAV+RS+S+SELMVKLGEFCGS+VTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSL 
Subjt:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLL

Query:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF
        HPL+IRAILSPPKSLKQISPPSSVD TLPNSPC+GVDSLP+SPQYG+NDRISSPS RF R+I SPP+KYF
Subjt:  HPLKIRAILSPPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26510.1 Octicosapeptide/Phox/Bem1p family protein5.4e-3650Show/hide
Query:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGS-----SVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRA
        M +     T+KFLCSYGGKILPR  DGKLRY GG TRVLAV RS+SFSEL  K+ E CG      +VT++CQLP  DL+ L+S+ SDEDL N++EEYD  
Subjt:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGS-----SVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRA

Query:  SSSLLHPLKIRAILSPPKSL---KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPP
        SSS   P+KIR  L+PPKS    K+  PP ++ S+   S      S  +SP+        SPS       PSPP
Subjt:  SSSLLHPLKIRAILSPPKSL---KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPP

AT3G26510.2 Octicosapeptide/Phox/Bem1p family protein5.4e-3650Show/hide
Query:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGS-----SVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRA
        M +     T+KFLCSYGGKILPR  DGKLRY GG TRVLAV RS+SFSEL  K+ E CG      +VT++CQLP  DL+ L+S+ SDEDL N++EEYD  
Subjt:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGS-----SVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRA

Query:  SSSLLHPLKIRAILSPPKSL---KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPP
        SSS   P+KIR  L+PPKS    K+  PP ++ S+   S      S  +SP+        SPS       PSPP
Subjt:  SSSLLHPLKIRAILSPPKSL---KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPP

AT3G26510.3 Octicosapeptide/Phox/Bem1p family protein5.4e-3650Show/hide
Query:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGS-----SVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRA
        M +     T+KFLCSYGGKILPR  DGKLRY GG TRVLAV RS+SFSEL  K+ E CG      +VT++CQLP  DL+ L+S+ SDEDL N++EEYD  
Subjt:  MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGS-----SVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRA

Query:  SSSLLHPLKIRAILSPPKSL---KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPP
        SSS   P+KIR  L+PPKS    K+  PP ++ S+   S      S  +SP+        SPS       PSPP
Subjt:  SSSLLHPLKIRAILSPPKSL---KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPP

AT3G48240.1 Octicosapeptide/Phox/Bem1p family protein3.6e-4066.19Show/hide
Query:  TLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLLHPLKIRAI
        +LKFLCSYGG+ILPR  DGKLRYVGGFTRVL+V  SISF+EL +KL EFCG SV LKCQLP GDLETLISV+SDEDL NIVEEYDR         KIRAI
Subjt:  TLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLLHPLKIRAI

Query:  LSPPKSLKQISPPSS--VDSTLPNSPCYGVDSLPNSPQY
        LSPP   KQ+SP SS       P SP + V + P+ P+Y
Subjt:  LSPPKSLKQISPPSS--VDSTLPNSPCYGVDSLPNSPQY

AT5G63130.1 Octicosapeptide/Phox/Bem1p family protein3.9e-4259.06Show/hide
Query:  TLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLLHPLKIRAI
        +LKFLCSYGG+ILPR TDGKLRYVGG TRVL+V+RSISFSELM KL EFCG SV L+CQLP GDLETLISV+S+E+LA IVEEYDR   +     KIRA+
Subjt:  TLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLLHPLKIRAI

Query:  LSPPKSL-KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSY-RFIRR---IPS---PPSKYFE
        LSPP+S  K  S PSS     P SP     S PNSP         SP+Y R+++    +PS   PP +Y +
Subjt:  LSPPKSL-KQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSY-RFIRR---IPS---PPSKYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCTGATGCGCGTACCGGAACCCTAAAGTTTCTCTGTAGCTACGGCGGCAAGATTCTTCCTCGTCAAACCGATGGTAAACTCCGTTACGTTGGTGGTTTTACCAG
AGTTCTAGCCGTCGAGCGGTCTATTTCGTTTTCTGAATTAATGGTGAAGCTTGGAGAATTCTGTGGTTCTTCCGTTACATTGAAGTGCCAATTACCAGGAGGAGACTTGG
AAACCTTGATTTCTGTTAGATCCGACGAAGATTTGGCCAACATCGTTGAGGAATACGATCGTGCTTCTTCGTCGTTGTTGCATCCTCTTAAAATCAGAGCCATTCTTTCG
CCGCCGAAATCTCTGAAGCAAATTTCTCCTCCGTCGAGTGTGGACTCCACTCTTCCTAATTCTCCGTGCTACGGCGTGGATTCGCTTCCGAACTCACCGCAATACGGAAT
CAACGACCGGATCTCTTCTCCTTCGTACAGATTCATCCGTCGGATCCCCTCGCCTCCTAGTAAATACTTCGAGGAATTCTCATTCTTCTCATTCTTAATCTCAATCTTCA
TTTTTAATATCTCTGTGGCGGTTCCGCCGTACACGGTGGCCGTGAGTCCACTTGAGAACTCAGCGCAATCGGCCGGCCACGTGGCCTTCATTCACAAGTCTGAATGTACA
GTTTTGTTTAAATCTTTTTGCCTTGATTTGCGTTTGCGATACCCTCTGGCGTTAAAGGACGAATCATCTGAACCGCCGCAGCCTCCCCCATTCTTGCCCGACACGTATTC
AAATTTCGTCGGCTTCGTCCATACGTGTGCCTCCATCCGACACGTAGTTTCTCGTGCGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCTGATGCGCGTACCGGAACCCTAAAGTTTCTCTGTAGCTACGGCGGCAAGATTCTTCCTCGTCAAACCGATGGTAAACTCCGTTACGTTGGTGGTTTTACCAG
AGTTCTAGCCGTCGAGCGGTCTATTTCGTTTTCTGAATTAATGGTGAAGCTTGGAGAATTCTGTGGTTCTTCCGTTACATTGAAGTGCCAATTACCAGGAGGAGACTTGG
AAACCTTGATTTCTGTTAGATCCGACGAAGATTTGGCCAACATCGTTGAGGAATACGATCGTGCTTCTTCGTCGTTGTTGCATCCTCTTAAAATCAGAGCCATTCTTTCG
CCGCCGAAATCTCTGAAGCAAATTTCTCCTCCGTCGAGTGTGGACTCCACTCTTCCTAATTCTCCGTGCTACGGCGTGGATTCGCTTCCGAACTCACCGCAATACGGAAT
CAACGACCGGATCTCTTCTCCTTCGTACAGATTCATCCGTCGGATCCCCTCGCCTCCTAGTAAATACTTCGAGGAATTCTCATTCTTCTCATTCTTAATCTCAATCTTCA
TTTTTAATATCTCTGTGGCGGTTCCGCCGTACACGGTGGCCGTGAGTCCACTTGAGAACTCAGCGCAATCGGCCGGCCACGTGGCCTTCATTCACAAGTCTGAATGTACA
GTTTTGTTTAAATCTTTTTGCCTTGATTTGCGTTTGCGATACCCTCTGGCGTTAAAGGACGAATCATCTGAACCGCCGCAGCCTCCCCCATTCTTGCCCGACACGTATTC
AAATTTCGTCGGCTTCGTCCATACGTGTGCCTCCATCCGACACGTAGTTTCTCGTGCGGCGTGA
Protein sequenceShow/hide protein sequence
MKSDARTGTLKFLCSYGGKILPRQTDGKLRYVGGFTRVLAVERSISFSELMVKLGEFCGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLLHPLKIRAILS
PPKSLKQISPPSSVDSTLPNSPCYGVDSLPNSPQYGINDRISSPSYRFIRRIPSPPSKYFEEFSFFSFLISIFIFNISVAVPPYTVAVSPLENSAQSAGHVAFIHKSECT
VLFKSFCLDLRLRYPLALKDESSEPPQPPPFLPDTYSNFVGFVHTCASIRHVVSRAA