; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G19030 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G19030
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMitochondrial pyruvate carrier
Genome locationClcChr06:29275277..29277026
RNA-Seq ExpressionClc06G19030
SyntenyClc06G19030
Gene Ontology termsGO:0006850 - mitochondrial pyruvate transmembrane transport (biological process)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
GO:0050833 - pyruvate transmembrane transporter activity (molecular function)
InterPro domainsIPR005336 - Mitochondrial pyruvate carrier


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589397.1 Transcription factor GTE9, partial [Cucurbita argyrosperma subsp. sororia]8.9e-4780.99Show/hide
Query:  SYTTAAKARNSSARLNSMPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQ
        S+  AAKAR S      M SFR+FLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYL+MGCH ANETVQ
Subjt:  SYTTAAKARNSSARLNSMPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQ

Query:  LYLLSRWAMGQRKTVKNYNNE
        LYLLSRWAMG+R+T+ N++NE
Subjt:  LYLLSRWAMGQRKTVKNYNNE

KAG7023076.1 Mitochondrial pyruvate carrier 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-4683.78Show/hide
Query:  SSARLNSMPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG
        + AR + M SFR+FLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYL+MGCH ANETVQLYLLSRWAMG
Subjt:  SSARLNSMPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG

Query:  QRKTVKNYNNE
        +R+T+ N++NE
Subjt:  QRKTVKNYNNE

XP_004138061.1 mitochondrial pyruvate carrier 1 [Cucumis sativus]1.1e-4792.31Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        MPSFRAFLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT VLCVYSLLCMRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWA+GQRKTV +
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YNNE
        Y+NE
Subjt:  YNNE

XP_008464463.1 PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis melo]3.6e-4893.27Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        MPSFRAFLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWAMGQRKTV +
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YNNE
        Y+NE
Subjt:  YNNE

XP_038879782.1 mitochondrial pyruvate carrier 1-like [Benincasa hispida]1.6e-5197.12Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        MPSFRAFLNS VGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YNNE
        Y+NE
Subjt:  YNNE

TrEMBL top hitse value%identityAlignment
A0A0A0LP00 Mitochondrial pyruvate carrier5.1e-4892.31Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        MPSFRAFLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT VLCVYSLLCMRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWA+GQRKTV +
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YNNE
        Y+NE
Subjt:  YNNE

A0A1S3CLN5 Mitochondrial pyruvate carrier1.8e-4893.27Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        MPSFRAFLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWAMGQRKTV +
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YNNE
        Y+NE
Subjt:  YNNE

A0A5A7UW28 Mitochondrial pyruvate carrier1.8e-4893.27Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        MPSFRAFLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWAMGQRKTV +
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YNNE
        Y+NE
Subjt:  YNNE

A0A6J1E6K9 Mitochondrial pyruvate carrier9.0e-4586.27Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        M SFR+FLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYL++GCH ANETVQLYLLSRWAMG+R+T+  
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YN
         N
Subjt:  YN

A0A6J1JJT4 Mitochondrial pyruvate carrier1.4e-4587.5Show/hide
Query:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN
        M SFR+FLNS VGPKTTHFWGPVANFGFVAAGLADV+KPADMISGRMT+VLCVYSLLCMRFGYMVRPRNYL++GCH ANETVQLYLLSRWAMG+R+TV N
Subjt:  MPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKTVKN

Query:  YNNE
        ++NE
Subjt:  YNNE

SwissProt top hitse value%identityAlignment
O74847 Probable mitochondrial pyruvate carrier 16.9e-1853.66Show/hide
Query:  PSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQ
        P FR +L S      THFWGP++NFG   A + D++K   +ISGRMT  L +YS + MR+ +MV PRNYLL+GCHA N TVQ
Subjt:  PSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQ

P63030 Mitochondrial pyruvate carrier 12.0e-1757.97Show/hide
Query:  TTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQL
        +THFWGPVAN+G   A + D++K  ++ISGRMT  LC YSL  MRF Y V+PRN+LL  CH  NE  QL
Subjt:  TTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQL

Q3ZCG2 Mitochondrial pyruvate carrier 16.9e-1859.42Show/hide
Query:  TTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQL
        +THFWGPVAN+G   A + D++K  ++ISGRMT  LC YSL  MRF Y V+PRN+LL  CHA NE  QL
Subjt:  TTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQL

Q949R9 Mitochondrial pyruvate carrier 16.2e-3572.53Show/hide
Query:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ
        F+AFLNS +GPKTTHFWGP+AN+GFVAAGL D++KP +MISG M+S +CVYS L MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA  Q
Subjt:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ

Q9Y5U8 Mitochondrial pyruvate carrier 16.9e-1859.42Show/hide
Query:  TTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQL
        +THFWGPVAN+G   A + D++K  ++ISGRMT  LC YSL  MRF Y V+PRN+LL  CHA NE  QL
Subjt:  TTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQL

Arabidopsis top hitse value%identityAlignment
AT4G14695.1 Uncharacterised protein family (UPF0041)2.5e-0733.72Show/hide
Query:  RAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISG-RMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSR
        +A  N   GPKT HFW P   +G   A +AD +KP + IS  +  +V C   + C R   ++ P+N+ L   + A     +Y L+R
Subjt:  RAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISG-RMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSR

AT4G22310.1 Uncharacterised protein family (UPF0041)2.5e-0729.41Show/hide
Query:  RAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSR
        +A  N   GPKT HFW P   +G   A +AD  KP + +S      +    ++  R+  ++ P+N+ L   + A     +Y L+R
Subjt:  RAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSR

AT5G20090.1 Uncharacterised protein family (UPF0041)4.4e-3672.53Show/hide
Query:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ
        F+AFLNS +GPKTTHFWGP+AN+GFVAAGL D++KP +MISG M+S +CVYS L MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA  Q
Subjt:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ

AT5G20090.2 Uncharacterised protein family (UPF0041)4.4e-3672.53Show/hide
Query:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ
        F+AFLNS +GPKTTHFWGP+AN+GFVAAGL D++KP +MISG M+S +CVYS L MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA  Q
Subjt:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ

AT5G20090.3 Uncharacterised protein family (UPF0041)4.4e-3672.53Show/hide
Query:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ
        F+AFLNS +GPKTTHFWGP+AN+GFVAAGL D++KP +MISG M+S +CVYS L MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA  Q
Subjt:  FRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTGGCCACAGTTTTGGACATAAAGAGGAAAAGCAAAGTCTAGTACATGCATTGGCTAAAAGAAGGGGAAAACATGGAGAAGACGAGTTTGCAGAAGTTCCCAA
CAAACCCGCAAGCACTAGCACCGTCGTTATCCGCAAACTCCGCCGAACAAACTACTCCTGCACGGCCCTCTCATCTCCACCATCGCCGCCCAGCCATTCCGACCTTCGTC
TTGACCTTTCTAAATTCAAATCCTCGCAACGGGGGCGGGGATACCTAATTTTCAATGGCCGAAATTCCGTCGTAATCGAGTCCAATTTCGACGAACTTTCCTACACAACT
GCCGCTAAAGCAAGAAATTCCAGTGCGAGGCTTAATTCGATGCCTTCTTTCCGCGCTTTCCTCAACAGCCACGTTGGCCCTAAAACAACTCATTTTTGGGGGCCTGTTGC
TAACTTTGGTTTCGTCGCTGCTGGGCTTGCAGATGTGAGAAAACCCGCTGATATGATTTCCGGGAGAATGACTTCAGTTTTGTGCGTATATTCGTTGTTATGCATGAGAT
TTGGGTATATGGTTCGGCCTCGAAACTATTTGCTTATGGGATGTCATGCTGCGAATGAGACTGTTCAGCTCTACCTTCTCTCTCGTTGGGCGATGGGCCAAAGGAAGACT
GTTAAAAATTACAACAACGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTTGGCCACAGTTTTGGACATAAAGAGGAAAAGCAAAGTCTAGTACATGCATTGGCTAAAAGAAGGGGAAAACATGGAGAAGACGAGTTTGCAGAAGTTCCCAA
CAAACCCGCAAGCACTAGCACCGTCGTTATCCGCAAACTCCGCCGAACAAACTACTCCTGCACGGCCCTCTCATCTCCACCATCGCCGCCCAGCCATTCCGACCTTCGTC
TTGACCTTTCTAAATTCAAATCCTCGCAACGGGGGCGGGGATACCTAATTTTCAATGGCCGAAATTCCGTCGTAATCGAGTCCAATTTCGACGAACTTTCCTACACAACT
GCCGCTAAAGCAAGAAATTCCAGTGCGAGGCTTAATTCGATGCCTTCTTTCCGCGCTTTCCTCAACAGCCACGTTGGCCCTAAAACAACTCATTTTTGGGGGCCTGTTGC
TAACTTTGGTTTCGTCGCTGCTGGGCTTGCAGATGTGAGAAAACCCGCTGATATGATTTCCGGGAGAATGACTTCAGTTTTGTGCGTATATTCGTTGTTATGCATGAGAT
TTGGGTATATGGTTCGGCCTCGAAACTATTTGCTTATGGGATGTCATGCTGCGAATGAGACTGTTCAGCTCTACCTTCTCTCTCGTTGGGCGATGGGCCAAAGGAAGACT
GTTAAAAATTACAACAACGAGTAG
Protein sequenceShow/hide protein sequence
MGLGHSFGHKEEKQSLVHALAKRRGKHGEDEFAEVPNKPASTSTVVIRKLRRTNYSCTALSSPPSPPSHSDLRLDLSKFKSSQRGRGYLIFNGRNSVVIESNFDELSYTT
AAKARNSSARLNSMPSFRAFLNSHVGPKTTHFWGPVANFGFVAAGLADVRKPADMISGRMTSVLCVYSLLCMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGQRKT
VKNYNNE