; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G19090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G19090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEF hand calcium-binding family protein
Genome locationClcChr06:29344155..29344583
RNA-Seq ExpressionClc06G19090
SyntenyClc06G19090
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652382.1 hypothetical protein Csa_014061 [Cucumis sativus]3.5e-6590.14Show/hide
Query:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS
        +EI+ S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGEL QAEAEAAVESLDSDGDGLLC GD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+
Subjt:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS

Query:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        LKKMLRKLGE KSTE+CK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

KAG7023071.1 putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-6188.49Show/hide
Query:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK
        INS+AQY RVLSYFDEDGDGKISPSEL NRVGL+GGELL  EAE AVESLDSDGDGLLCAGDFERLL+VGEEEKLKDLKEAF LYD EGCGFITPKSLK+
Subjt:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK

Query:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        MLRKLGE KST +CKLMI +FDLNGDGLISFEEFQIMMA
Subjt:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

XP_004138054.1 putative calcium-binding protein CML19 [Cucumis sativus]1.6e-6590.85Show/hide
Query:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS
        MEI+ S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGEL QAEAEAAVESLDSDGDGLLC GD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+
Subjt:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS

Query:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        LKKMLRKLGE KSTE+CK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

XP_008464450.1 PREDICTED: putative calcium-binding protein CML19 [Cucumis melo]5.4e-6692.25Show/hide
Query:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS
        MEI  S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGELLQAEAEAAVESLDSDGDGLLCAGD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+
Subjt:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS

Query:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        LKKMLRKLGE KSTE+CK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

XP_038879778.1 putative calcium-binding protein CML19 [Benincasa hispida]4.1e-6694.24Show/hide
Query:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK
        IN AAQYDRVLSYFDEDGDGKISPSEL NR+GL+GGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYD EGCGFITPK+LKK
Subjt:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK

Query:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        MLRKLGE KSTE+CKLMIRRFDLNGDGLISFEEFQIMMA
Subjt:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

TrEMBL top hitse value%identityAlignment
A0A0A0LU40 Uncharacterized protein7.6e-6690.85Show/hide
Query:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS
        MEI+ S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGEL QAEAEAAVESLDSDGDGLLC GD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+
Subjt:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS

Query:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        LKKMLRKLGE KSTE+CK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

A0A1S3CN12 putative calcium-binding protein CML192.6e-6692.25Show/hide
Query:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS
        MEI  S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGELLQAEAEAAVESLDSDGDGLLCAGD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+
Subjt:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS

Query:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        LKKMLRKLGE KSTE+CK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

A0A5A7URJ2 Putative calcium-binding protein CML192.6e-6692.25Show/hide
Query:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS
        MEI  S AQYDRVLSYFDEDGDGKISPSEL NR+GLIGGELLQAEAEAAVESLDSDGDGLLCAGD ERLLEVGEEEKLKDLKEAFALYD+EGCGFITPK+
Subjt:  MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKS

Query:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        LKKMLRKLGE KSTE+CK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

A0A6J1E2E7 putative calcium-binding protein CML192.5e-6187.77Show/hide
Query:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK
        IN++AQY RVLSYFDEDGDGKISPSEL NRVGL+GGELL  EAE AVESLDSDGDGLLCAGDFERLL+VGEEEKLKDLKEAF LYD EGCGFITPKSLK+
Subjt:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK

Query:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        MLRKLGE KST +CKLMI +FDLNGDGLISFEEFQIMMA
Subjt:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

A0A6J1EJM6 putative calcium-binding protein CML191.9e-6187.05Show/hide
Query:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK
        I SAA YDRVL YFDEDGDGKISPSEL NR+GLIGGELL AEAEAAVESLDSDGDGLLC GD ERLL+VGEEEKLKDL+EAF LYD EGCGFITPKSLK+
Subjt:  INSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKK

Query:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA
        ML+KLGE KST +CK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  MLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA

SwissProt top hitse value%identityAlignment
Q8RYJ8 Putative calcium-binding protein CML198.4e-3051.39Show/hide
Query:  IINSAAQYDRVLSYFDEDGDGKISPSEL-INRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERL---LEVG-EEEKLKDLKEAFALYDTEGCGFIT
        ++ + A++ RV S FD D DGKIS +EL +     +G ++   EAEA V S D+D DGLL   +F +L   LE+G EEE+ + L EAF +Y+ EG G IT
Subjt:  IINSAAQYDRVLSYFDEDGDGKISPSEL-INRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERL---LEVG-EEEKLKDLKEAFALYDTEGCGFIT

Query:  PKSLKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        P SLK+ML KLG  +  E+C+ MI RFDL+GDG+ISFEEF+IMM
Subjt:  PKSLKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

Q8RYK0 Probable calcium-binding protein CML311.2e-2847.18Show/hide
Query:  SAAQYDRVLSYFDEDGDGKISPSEL-INRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKD-----LKEAFALYDTEGCGFITPK
        S  +   + + FD DGDG+IS +EL +     +G E+   EA   V S+D+DGDGLLC  +F RL++  E E+  +     L+EAF +Y+ EG G ITP 
Subjt:  SAAQYDRVLSYFDEDGDGKISPSEL-INRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKD-----LKEAFALYDTEGCGFITPK

Query:  SLKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        SL++MLR+LG  +  +DC+ MI RFDLNGDG++SF+EF+IMM
Subjt:  SLKKMLRKLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

Q9FIH9 Calcium-binding protein CML378.1e-2546.97Show/hide
Query:  VLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLE---VGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLG
        V  Y D + DGKIS  EL + V L+GG L   E E  V++ D DGDG +   +F +L+E     +EE+ K+LKEAF +Y  EG  FIT  SL++ L +LG
Subjt:  VLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLE---VGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLG

Query:  EIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        E  + + CK+MIR FD N DG++SF+EF +MM
Subjt:  EIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

Q9SRE6 Calcium-binding protein CML384.2e-2950.75Show/hide
Query:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK
        + + V SY D + DG+ISP EL      +G +L   EA AAV   D+DGDG+L   +F +L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+K
Subjt:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK

Query:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        LGE ++T+DC++MI  FDLN DG++SF+EF +MM
Subjt:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

Q9SRE7 Calcium-binding protein CML391.5e-2647.41Show/hide
Query:  DRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLL----EVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLR
        + V +Y D + DG+IS  EL      +G ++   EAEAAV+  D DGDG+L   +F  L+    E  EEEK + + EAF +Y  +G   ITP SLK ML 
Subjt:  DRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLL----EVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLR

Query:  KLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        KLGE ++T+DCK+MI+ FDLN DG++SF+EF +MM
Subjt:  KLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein1.1e-2747.41Show/hide
Query:  DRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLL----EVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLR
        + V +Y D + DG+IS  EL      +G ++   EAEAAV+  D DGDG+L   +F  L+    E  EEEK + + EAF +Y  +G   ITP SLK ML 
Subjt:  DRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLL----EVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLR

Query:  KLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        KLGE ++T+DCK+MI+ FDLN DG++SF+EF +MM
Subjt:  KLGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

AT1G76650.1 calmodulin-like 383.0e-3050.75Show/hide
Query:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK
        + + V SY D + DG+ISP EL      +G +L   EA AAV   D+DGDG+L   +F +L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+K
Subjt:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK

Query:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        LGE ++T+DC++MI  FDLN DG++SF+EF +MM
Subjt:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

AT1G76650.2 calmodulin-like 385.2e-2747.76Show/hide
Query:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK
        + + V SY D + DG+ISP EL      +G +LL           D+DGDG+L   +F +L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+K
Subjt:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK

Query:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        LGE ++T+DC++MI  FDLN DG++SF+EF +MM
Subjt:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

AT1G76650.3 calmodulin-like 383.0e-3050.75Show/hide
Query:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK
        + + V SY D + DG+ISP EL      +G +L   EA AAV   D+DGDG+L   +F +L++V  EEEK  +LK AF LY  EG   ITP+SLK ML+K
Subjt:  QYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEV-GEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRK

Query:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        LGE ++T+DC++MI  FDLN DG++SF+EF +MM
Subjt:  LGEIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM

AT5G42380.1 calmodulin like 375.8e-2646.97Show/hide
Query:  VLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLE---VGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLG
        V  Y D + DGKIS  EL + V L+GG L   E E  V++ D DGDG +   +F +L+E     +EE+ K+LKEAF +Y  EG  FIT  SL++ L +LG
Subjt:  VLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLE---VGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLG

Query:  EIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM
        E  + + CK+MIR FD N DG++SF+EF +MM
Subjt:  EIKSTEDCKLMIRRFDLNGDGLISFEEFQIMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCATCAACAGCGCAGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGCAAGATTTCGCCGTCGGAGCTGATAAATCGGGTAGGATTGAT
CGGCGGAGAGCTGCTGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTTGACTCCGACGGCGATGGATTGCTGTGCGCCGGTGATTTCGAACGGCTACTGGAGGTTGGGG
AGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTCTGTACGATACCGAAGGTTGTGGGTTCATAACTCCGAAGAGTTTGAAGAAAATGCTAAGAAAATTGGGGGAA
ATCAAATCAACTGAGGATTGTAAATTGATGATTCGTCGCTTCGATTTGAACGGCGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCATCAACAGCGCAGCACAGTACGATCGTGTATTGAGTTACTTCGACGAAGATGGAGACGGCAAGATTTCGCCGTCGGAGCTGATAAATCGGGTAGGATTGAT
CGGCGGAGAGCTGCTGCAGGCGGAGGCTGAGGCGGCGGTGGAATCGCTTGACTCCGACGGCGATGGATTGCTGTGCGCCGGTGATTTCGAACGGCTACTGGAGGTTGGGG
AGGAAGAGAAATTGAAGGATTTGAAAGAGGCGTTTGCTCTGTACGATACCGAAGGTTGTGGGTTCATAACTCCGAAGAGTTTGAAGAAAATGCTAAGAAAATTGGGGGAA
ATCAAATCAACTGAGGATTGTAAATTGATGATTCGTCGCTTCGATTTGAACGGCGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCTTAA
Protein sequenceShow/hide protein sequence
MEIINSAAQYDRVLSYFDEDGDGKISPSELINRVGLIGGELLQAEAEAAVESLDSDGDGLLCAGDFERLLEVGEEEKLKDLKEAFALYDTEGCGFITPKSLKKMLRKLGE
IKSTEDCKLMIRRFDLNGDGLISFEEFQIMMA