; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G19120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G19120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDET1- and DDB1-associated protein 1
Genome locationClcChr06:29365836..29370478
RNA-Seq ExpressionClc06G19120
SyntenyClc06G19120
Gene Ontology termsGO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
InterPro domainsIPR003034 - SAP domain
IPR018276 - DET1- and DDB1-associated protein 1, N-terminal
IPR033575 - DET1- and DDB1-associated protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057775.1 apoptotic chromatin condensation inducer in the nucleus [Cucumis melo var. makuwa]9.2e-6389.47Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MA S+SSS HGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDT+PPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVA AESSRKRAGEKISDS+AK+
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS
        AAQVCS+KGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKK  I   ++S
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS

KAG7021398.1 hypothetical protein SDJN02_15123 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-6376.88Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MASSASSS+HGASKFLGDLPSRG+FSS+VPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVAAAESSRKRAGEKISD +AKR
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
         AQV S KGASN+ETPSKD QNLTVERLRALLKA+GLSL+GKK  IL                      + +  +DELIARLRSAD
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

XP_004138052.1 uncharacterized protein LOC101215024 [Cucumis sativus]1.6e-6276.88Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MA S+SSS HGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDT+PPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVA  ESSRKRAGEKISDS+AK+
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
        AAQVCS+KGASNNETP+KDLQNLTVERLRALLKAKGLSLRGKK                                DELIARLRSAD
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

XP_008464442.1 PREDICTED: uncharacterized protein LOC103502327 [Cucumis melo]2.4e-6377.96Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MA S+SSS HGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDT+PPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVA AESSRKRAGEKISDS+AK+
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
        AAQVCS+KGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKK                                DELIARLRSAD
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

XP_038878488.1 uncharacterized protein LOC120070711 [Benincasa hispida]4.1e-6378.38Show/hide
Query:  ASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKRA
        +SS+SSS HGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK++SSKDGKG AAAESSRKRAGEKISDS+AKRA
Subjt:  ASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKRA

Query:  AQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
        AQVCS KGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKK                                DELIARLRSAD
Subjt:  AQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

TrEMBL top hitse value%identityAlignment
A0A0A0LNX7 DET1- and DDB1-associated protein 17.6e-6376.88Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MA S+SSS HGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDT+PPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVA  ESSRKRAGEKISDS+AK+
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
        AAQVCS+KGASNNETP+KDLQNLTVERLRALLKAKGLSLRGKK                                DELIARLRSAD
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

A0A1S3CLX1 DET1- and DDB1-associated protein 11.2e-6377.96Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MA S+SSS HGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDT+PPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVA AESSRKRAGEKISDS+AK+
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
        AAQVCS+KGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKK                                DELIARLRSAD
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

A0A5A7UW19 DET1- and DDB1-associated protein 14.4e-6389.47Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MA S+SSS HGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDT+PPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVA AESSRKRAGEKISDS+AK+
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS
        AAQVCS+KGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKK  I   ++S
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS

A0A6J1ERA7 DET1- and DDB1-associated protein 17.1e-6175.81Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MASSASSS+HGASKFLGDLPSRG+FSS+VPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVAAAESSRKRAGEKISD +AKR
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
         AQV S KGASN+ETPSKD QNLTVERLRALLKA+GLSL+GKK                                DELIARLRSAD
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

A0A6J1KMN1 DET1- and DDB1-associated protein 17.1e-6175.81Show/hide
Query:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR
        MASSASSS+HGASKFLGDLPSRG+FSS+VPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK+SSSKDGKGVAAAESSRKRAGEKISD +AKR
Subjt:  MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKR

Query:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD
         AQV S KGASN+ETPSKD QNLTVERLRALLKA+GLSL+GKK                                DELIARLRSAD
Subjt:  AAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63460.1 SAP domain-containing protein4.3e-3458.82Show/hide
Query:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----SSSSKDGKGVAAAESSRKRAGEKISD-SKAK
        + SS   ASKFL DLPSRGF SSTV SSNPGS+RVYIC HDTSPPE Q IKTNQQNILIRSL+LK     SSSKD KG A     ++ A   + D S AK
Subjt:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----SSSSKDGKGVAAAESSRKRAGEKISD-SKAK

Query:  RAAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS
        RAA     +G S++ T  +D Q+LTVE+LRA+LK KGL  +G+K  ++A  KS
Subjt:  RAAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS

AT5G63460.2 SAP domain-containing protein1.2e-3358.17Show/hide
Query:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----SSSSKDGKGVAAAESSRKRAGEKISD-SKAK
        + SS   ASKFL DLPSRGF SSTV SSNPGS+RVYIC HDTSPPE Q IKTNQQNILIRSL+LK     SSSKD KG A     ++ A   + D S AK
Subjt:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLK----SSSSKDGKGVAAAESSRKRAGEKISD-SKAK

Query:  RAAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS
        RAA   +++  S++ T  +D Q+LTVE+LRA+LK KGL  +G+K  ++A  KS
Subjt:  RAAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS

AT5G63460.3 SAP domain-containing protein1.2e-1538.51Show/hide
Query:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKRAAQV
        + SS   ASKFL DLPSRGF SSTV SSNPGS+RVYIC HDTSPPE                                                      
Subjt:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKRAAQV

Query:  CSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS
              S++ T  +D Q+LTVE+LRA+LK KGL  +G+K  ++A  KS
Subjt:  CSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS

AT5G63460.4 SAP domain-containing protein5.8e-3153.94Show/hide
Query:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPP------------EDQEIKTNQQNILIRSLMLK----SSSSKDGKGVAAAESSRKR
        + SS   ASKFL DLPSRGF SSTV SSNPGS+RVYIC HDTSPP            + Q IKTNQQNILIRSL+LK     SSSKD KG A     ++ 
Subjt:  ASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPP------------EDQEIKTNQQNILIRSLMLK----SSSSKDGKGVAAAESSRKR

Query:  AGEKISD-SKAKRAAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS
        A   + D S AKRAA     +G S++ T  +D Q+LTVE+LRA+LK KGL  +G+K  ++A  KS
Subjt:  AGEKISD-SKAKRAAQVCSTKGASNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTCCGCTTCTTCTTCTGCTCATGGCGCTTCCAAGTTCCTCGGCGACCTTCCTTCCCGAGGCTTCTTCTCTTCTACCGTTCCCTCCTCAAATCCGGGAAGTAT
GCGAGTCTATATCTGCCTTCATGATACCTCACCACCAGAGGATCAAGAAATCAAGACAAACCAGCAGAATATACTTATTAGATCTTTAATGCTTAAAAGTTCCAGTTCAA
AGGATGGAAAGGGGGTAGCTGCAGCCGAGTCATCTCGAAAGAGGGCTGGCGAAAAAATTTCAGATAGCAAAGCAAAGAGGGCTGCACAAGTATGTTCTACCAAAGGGGCA
TCAAACAATGAAACACCGAGTAAGGATCTACAGAATTTGACTGTAGAGAGGCTGCGTGCCCTTCTCAAGGCTAAAGGCCTCTCGCTCAGAGGAAAGAAGGTAATGATTTT
AGCTATTTCAAAATCACTCTTTAACATGAATCCAAACCTTATTGATCATGGGGTGTTTGAGGAGTCTTTCACTGACCCGGTGCAGGATGAATTAATTGCCCGCCTGAGAA
GCGCGGATGTTAGGAGTAGGTTGTACTTGCAAGTCGAACGGGTGGTGGTTTTTGGAAAACAAAAGCTACTCATTGCCGCCATTCCACCATTGTTCGTTTCCAGCTCAGCT
TTCTCTTCATCTTCTTCGAAAGGTGATGATGCTCTATTCATTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TCTTATCATACAATACGGCTTTCTTTCTCCCGTTTAGCATAGATTTGACTGATCATCTTGCTTTCTTTCTAGTTTCTCTACTTTACAAGGGTTTCTCGCCCATGGCGTCT
TCCGCTTCTTCTTCTGCTCATGGCGCTTCCAAGTTCCTCGGCGACCTTCCTTCCCGAGGCTTCTTCTCTTCTACCGTTCCCTCCTCAAATCCGGGAAGTATGCGAGTCTA
TATCTGCCTTCATGATACCTCACCACCAGAGGATCAAGAAATCAAGACAAACCAGCAGAATATACTTATTAGATCTTTAATGCTTAAAAGTTCCAGTTCAAAGGATGGAA
AGGGGGTAGCTGCAGCCGAGTCATCTCGAAAGAGGGCTGGCGAAAAAATTTCAGATAGCAAAGCAAAGAGGGCTGCACAAGTATGTTCTACCAAAGGGGCATCAAACAAT
GAAACACCGAGTAAGGATCTACAGAATTTGACTGTAGAGAGGCTGCGTGCCCTTCTCAAGGCTAAAGGCCTCTCGCTCAGAGGAAAGAAGGTAATGATTTTAGCTATTTC
AAAATCACTCTTTAACATGAATCCAAACCTTATTGATCATGGGGTGTTTGAGGAGTCTTTCACTGACCCGGTGCAGGATGAATTAATTGCCCGCCTGAGAAGCGCGGATG
TTAGGAGTAGGTTGTACTTGCAAGTCGAACGGGTGGTGGTTTTTGGAAAACAAAAGCTACTCATTGCCGCCATTCCACCATTGTTCGTTTCCAGCTCAGCTTTCTCTTCA
TCTTCTTCGAAAGGTGATGATGCTCTATTCATTTCTTAA
Protein sequenceShow/hide protein sequence
MASSASSSAHGASKFLGDLPSRGFFSSTVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKSSSSKDGKGVAAAESSRKRAGEKISDSKAKRAAQVCSTKGA
SNNETPSKDLQNLTVERLRALLKAKGLSLRGKKVMILAISKSLFNMNPNLIDHGVFEESFTDPVQDELIARLRSADVRSRLYLQVERVVVFGKQKLLIAAIPPLFVSSSA
FSSSSSKGDDALFIS