; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G19160 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G19160
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMYND-type domain-containing protein
Genome locationClcChr06:29400264..29401969
RNA-Seq ExpressionClc06G19160
SyntenyClc06G19160
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002893 - Zinc finger, MYND-type
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044508 - F-box protein At5g50450/At1g67340-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057772.1 F-box protein [Cucumis melo var. makuwa]2.4e-16294.67Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN
        QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATRCSLLSDFGCNVPAPEPHPVN
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN

Query:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV
        LFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRCSVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNA  MFDIVEEVEDA NIVGIV
Subjt:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV

KAG6589385.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-16573.96Show/hide
Query:  MKWWMDVCIKTAP-LEFVFTERIGK--LKKRTRTVTISDFPYQRDTNTPSHAAVPHSKISTLDACNHETLQDDLCQEAKNMPQIRRRIRSLRCLAGRSPY
        MKWW+    K  P LEFVFTER  K  +KKR        FP      TP   AVPHS  STL+ACN          +  NM   +R  R+ R  A  S  
Subjt:  MKWWMDVCIKTAP-LEFVFTERIGK--LKKRTRTVTISDFPYQRDTNTPSHAAVPHSKISTLDACNHETLQDDLCQEAKNMPQIRRRIRSLRCLAGRSPY

Query:  TPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGAS
           LP  LL  L  R      SP D         RLNRLVLHPLVLS AGPKAFAVR +KWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGAS
Subjt:  TPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGAS

Query:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQR
        LMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+NSDEGRRLLIQANARELAAVLLSSS + +QQR
Subjt:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQR

Query:  HHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEEC
        HHQFGNLPDLTATRCSLLSDFGC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSHGGCGR ETRPHEFRRCS+CG VNYCSRGCQAQDWKVRHKEEC
Subjt:  HHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEEC

Query:  TAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV
        TAVQRW+D   +NA GGMF+ VEEVEDAN+VG V
Subjt:  TAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV

XP_004138048.1 F-box protein At1g67340 [Cucumis sativus]1.5e-15692.36Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RLNRLVL+P+VL  AGPKAFAVR + W DSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN
        QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSS WQQQRH+Q GNLPDLTATRCSLLSDFGCNVPAPEPHPVN
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN

Query:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIV-EEVEDA-NIVGI
        LFLREWFESEGEVAAR GLRLCSH GCGR ETRPHEFRRCSVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MF IV EEVEDA NIVGI
Subjt:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIV-EEVEDA-NIVGI

Query:  V
        V
Subjt:  V

XP_008464430.1 PREDICTED: F-box protein At1g67340-like [Cucumis melo]3.7e-16395Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN
        QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATRCSLLSDFGCNVPAPEPHPVN
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN

Query:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV
        LFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRCSVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MFDIVEEVEDA NIVGIV
Subjt:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV

XP_022921747.1 F-box protein At1g67340-like [Cucurbita moschata]9.2e-15481.95Show/hide
Query:  RRIRSLRCLAGRSPYTPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLG
        +R R+ R  A  S     LP  LL  L  R      SP D         RLNRLVLHPLVLS AGPKAFAVR +KWCDSAHRFLKRCVDAGNSEASYTLG
Subjt:  RRIRSLRCLAGRSPYTPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLG

Query:  MIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANAREL
        MIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLLIQANAREL
Subjt:  MIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANAREL

Query:  AAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSR
        AAVLLSSS + +QQRHHQFGNLPDLTATRCSLLSDFGC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSHGGCGR ETRPHEFRRCS+CG VNYCSR
Subjt:  AAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSR

Query:  GCQAQDWKVRHKEECTAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV
        GCQAQDWKVRHKEECTAVQRW+D   +NA GGMF+ VEEVEDAN+VG V
Subjt:  GCQAQDWKVRHKEECTAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV

TrEMBL top hitse value%identityAlignment
A0A0A0LNX1 MYND-type domain-containing protein7.4e-15792.36Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RLNRLVL+P+VL  AGPKAFAVR + W DSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN
        QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSS WQQQRH+Q GNLPDLTATRCSLLSDFGCNVPAPEPHPVN
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN

Query:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIV-EEVEDA-NIVGI
        LFLREWFESEGEVAAR GLRLCSH GCGR ETRPHEFRRCSVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MF IV EEVEDA NIVGI
Subjt:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIV-EEVEDA-NIVGI

Query:  V
        V
Subjt:  V

A0A1S3CLL0 F-box protein At1g67340-like1.8e-16395Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN
        QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATRCSLLSDFGCNVPAPEPHPVN
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN

Query:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV
        LFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRCSVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MFDIVEEVEDA NIVGIV
Subjt:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV

A0A5A7UPI5 F-box protein1.2e-16294.67Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN
        QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATRCSLLSDFGCNVPAPEPHPVN
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN

Query:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV
        LFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRCSVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNA  MFDIVEEVEDA NIVGIV
Subjt:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV

A0A5D3BGS7 F-box protein1.8e-16395Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RLNRLVLHPLVLS AGPKAFAVR + WCDS+HRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN
        QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLL+QANARELA VLLSSSSIWQQQRH+Q GNLPDLTATRCSLLSDFGCNVPAPEPHPVN
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVN

Query:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV
        LFLREWFESEGEVAARGGLRLCSH GCGRAETRPHEFRRCSVCG VNYCSRGCQAQDWKVRHKEECT VQRWRDE ANNAG MFDIVEEVEDA NIVGIV
Subjt:  LFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDA-NIVGIV

A0A6J1E1B7 F-box protein At1g67340-like4.5e-15481.95Show/hide
Query:  RRIRSLRCLAGRSPYTPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLG
        +R R+ R  A  S     LP  LL  L  R      SP D         RLNRLVLHPLVLS AGPKAFAVR +KWCDSAHRFLKRCVDAGNSEASYTLG
Subjt:  RRIRSLRCLAGRSPYTPPLPPRLLRLLPFR---PPQSPLD---------RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLG

Query:  MIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANAREL
        MIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLLIQANAREL
Subjt:  MIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANAREL

Query:  AAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSR
        AAVLLSSS + +QQRHHQFGNLPDLTATRCSLLSDFGC+ PA EPHPVNLFLREWFESE  VAAR GLRLCSHGGCGR ETRPHEFRRCS+CG VNYCSR
Subjt:  AAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSR

Query:  GCQAQDWKVRHKEECTAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV
        GCQAQDWKVRHKEECTAVQRW+D   +NA GGMF+ VEEVEDAN+VG V
Subjt:  GCQAQDWKVRHKEECTAVQRWRDEAANNA-GGMFDIVEEVEDANIVGIV

SwissProt top hitse value%identityAlignment
Q09415 SET domain-containing protein 147.4e-0542.59Show/hide
Query:  CGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNA
        C +  T   E ++CS C R+ YCS+ CQ  DWK+ HK EC A+ +  +E AN++
Subjt:  CGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNA

Q9FK27 F-box protein At5g504501.0e-9963.85Show/hide
Query:  SPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKS
        S   RLNRL LHPLVLS AG +  AV  +KW DS+H+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VIQFNGSGGSK+
Subjt:  SPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKS

Query:  DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEP
        DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++  EGRRLLIQANARELA  L S  S+     +     L DL+             VP  E 
Subjt:  DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEP

Query:  HPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVED
        HPVN FL+EWF S G V    GLR+CSHGGCGR ETR HEFRRCSVCG+VNYCSRGCQA DW+ +HK ECT +  W   AA        +  E++D
Subjt:  HPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVED

Q9FYF9 F-box protein At1g673408.5e-11068.18Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RL  L ++P+VLS   PKA AV+   W + +HRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVL---LSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPH
        +AGVALCARAAFLGHVDALRELGHCLQDGYGV QN  EGRR L+QANARELAAVL   + + S W          +P+     C LLSDFGCNVPAPE H
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVL---LSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPH

Query:  PVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGM
        P N FL +WF   G      GLRLCSH GCGR ETR HEFRRCSVCG VNYCSR CQA DWK+RHK +C  VQRW +E     G +
Subjt:  PVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGM

Arabidopsis top hitse value%identityAlignment
AT1G17110.1 ubiquitin-specific protease 158.4e-0453.12Show/hide
Query:  RCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQ
        RCS C  V YCS  CQ   W+V HK+EC  V+
Subjt:  RCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQ

AT1G17110.2 ubiquitin-specific protease 158.4e-0453.12Show/hide
Query:  RCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQ
        RCS C  V YCS  CQ   W+V HK+EC  V+
Subjt:  RCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQ

AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger6.0e-11168.18Show/hide
Query:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL
        RL  L ++P+VLS   PKA AV+   W + +HRFLKRCVDAG+ EA YTLGMIRFYCL+NRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL
Subjt:  RLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDL

Query:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVL---LSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPH
        +AGVALCARAAFLGHVDALRELGHCLQDGYGV QN  EGRR L+QANARELAAVL   + + S W          +P+     C LLSDFGCNVPAPE H
Subjt:  QAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVL---LSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPH

Query:  PVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGM
        P N FL +WF   G      GLRLCSH GCGR ETR HEFRRCSVCG VNYCSR CQA DWK+RHK +C  VQRW +E     G +
Subjt:  PVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGM

AT2G24640.1 ubiquitin-specific protease 193.8e-0447.5Show/hide
Query:  CGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEEC
        CG+A T     ++CS C  V YCS  CQ  DWK  HK +C
Subjt:  CGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEEC

AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger7.4e-10163.85Show/hide
Query:  SPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKS
        S   RLNRL LHPLVLS AG +  AV  +KW DS+H+FLK CV+AGN +ASY+LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VIQFNGSGGSK+
Subjt:  SPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKS

Query:  DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEP
        DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++  EGRRLLIQANARELA  L S  S+     +     L DL+             VP  E 
Subjt:  DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEP

Query:  HPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVED
        HPVN FL+EWF S G V    GLR+CSHGGCGR ETR HEFRRCSVCG+VNYCSRGCQA DW+ +HK ECT +  W   AA        +  E++D
Subjt:  HPVNLFLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTGGAGGTCCCACCAGCAAGGCAATGAAGTGGTGGATGGATGTGTGTATAAAAACCGCCCCGTTGGAATTCGTCTTTACCGAACGCATAGGAAAATTAAAAAA
GAGAACCAGAACGGTTACCATTTCCGATTTCCCATACCAGAGAGATACCAACACGCCGTCGCACGCCGCCGTACCACACTCCAAAATCTCAACTCTCGACGCATGTAATC
ACGAAACTCTTCAAGATGATTTGTGCCAAGAGGCCAAGAACATGCCGCAAATTCGCCGCAGAATCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTTATACACCTCCT
CTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTCCTCTTGACAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAACGCCGGACCGAA
GGCGTTTGCAGTACGACCGAAAAAATGGTGTGATTCCGCTCACCGATTTCTCAAACGTTGCGTCGACGCTGGTAATTCGGAAGCGAGTTACACGCTCGGAATGATCCGAT
TTTATTGCTTGAGGAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCTCACGCTCCGGCGCTATATTCGCTCGCCGTCATTCAATTTAACGGCAGC
GGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGTCACTGCCTTCAAGA
CGGTTACGGTGTGAGACAAAACTCCGACGAAGGCCGCCGTCTCCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCGGTTCTACTCTCCTCCTCGAGTATATGGCAGCAAC
AGCGCCACCACCAGTTTGGCAACCTCCCTGATTTGACGGCGACGCGTTGTTCATTGCTGAGCGATTTTGGGTGTAACGTTCCGGCGCCGGAACCACATCCGGTGAACCTG
TTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACGGTGGATGTGGTCGGGCGGAGACTCGGCCGCACGAGTTCCG
ACGGTGTTCAGTTTGTGGCAGAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTACGGCCGTTCAGCGGTGGCGGGATG
AGGCTGCTAACAATGCCGGCGGCATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACATCGTGGGTATTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGTGGAGGTCCCACCAGCAAGGCAATGAAGTGGTGGATGGATGTGTGTATAAAAACCGCCCCGTTGGAATTCGTCTTTACCGAACGCATAGGAAAATTAAAAAA
GAGAACCAGAACGGTTACCATTTCCGATTTCCCATACCAGAGAGATACCAACACGCCGTCGCACGCCGCCGTACCACACTCCAAAATCTCAACTCTCGACGCATGTAATC
ACGAAACTCTTCAAGATGATTTGTGCCAAGAGGCCAAGAACATGCCGCAAATTCGCCGCAGAATCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTTATACACCTCCT
CTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTCCTCTTGACAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTTTTGTCTAACGCCGGACCGAA
GGCGTTTGCAGTACGACCGAAAAAATGGTGTGATTCCGCTCACCGATTTCTCAAACGTTGCGTCGACGCTGGTAATTCGGAAGCGAGTTACACGCTCGGAATGATCCGAT
TTTATTGCTTGAGGAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCTCACGCTCCGGCGCTATATTCGCTCGCCGTCATTCAATTTAACGGCAGC
GGTGGCTCTAAGAGCGACAAGGATCTCCAGGCAGGCGTAGCGCTCTGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGTCACTGCCTTCAAGA
CGGTTACGGTGTGAGACAAAACTCCGACGAAGGCCGCCGTCTCCTCATCCAAGCCAACGCCCGTGAGCTTGCTGCGGTTCTACTCTCCTCCTCGAGTATATGGCAGCAAC
AGCGCCACCACCAGTTTGGCAACCTCCCTGATTTGACGGCGACGCGTTGTTCATTGCTGAGCGATTTTGGGTGTAACGTTCCGGCGCCGGAACCACATCCGGTGAACCTG
TTTTTGAGAGAGTGGTTCGAGTCGGAAGGTGAAGTGGCGGCGCGTGGGGGTCTGAGACTTTGTTCGCACGGTGGATGTGGTCGGGCGGAGACTCGGCCGCACGAGTTCCG
ACGGTGTTCAGTTTGTGGCAGAGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTACGGCCGTTCAGCGGTGGCGGGATG
AGGCTGCTAACAATGCCGGCGGCATGTTTGATATTGTAGAAGAGGTTGAGGACGCCAACATCGTGGGTATTGTATAAAATCATAACAGCGCTGTAATTTGAGTTTATTTA
TGGATATAAATATATAGTTTTCGTAAACAA
Protein sequenceShow/hide protein sequence
MRSGGPTSKAMKWWMDVCIKTAPLEFVFTERIGKLKKRTRTVTISDFPYQRDTNTPSHAAVPHSKISTLDACNHETLQDDLCQEAKNMPQIRRRIRSLRCLAGRSPYTPP
LPPRLLRLLPFRPPQSPLDRLNRLVLHPLVLSNAGPKAFAVRPKKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGS
GGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNSDEGRRLLIQANARELAAVLLSSSSIWQQQRHHQFGNLPDLTATRCSLLSDFGCNVPAPEPHPVNL
FLREWFESEGEVAARGGLRLCSHGGCGRAETRPHEFRRCSVCGRVNYCSRGCQAQDWKVRHKEECTAVQRWRDEAANNAGGMFDIVEEVEDANIVGIV