; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G19190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G19190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNuclear transcription factor Y subunit C
Genome locationClcChr06:29435448..29441051
RNA-Seq ExpressionClc06G19190
SyntenyClc06G19190
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057769.1 nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa]3.6e-11799.54Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASG SSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

XP_004138046.1 nuclear transcription factor Y subunit C-1 [Cucumis sativus]6.1e-11799.09Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MD NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASG SSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

XP_008464428.1 PREDICTED: nuclear transcription factor Y subunit C-1 [Cucumis melo]1.6e-11799.55Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASG SSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

XP_022134838.1 nuclear transcription factor Y subunit C-1-like [Momordica charantia]2.7e-11799.09Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASGGSSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

XP_038878995.1 nuclear transcription factor Y subunit C-1 [Benincasa hispida]9.4e-11899.55Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MDTNNQ QSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASGGSSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

TrEMBL top hitse value%identityAlignment
A0A0A0LNK7 CBFD_NFYB_HMF domain-containing protein2.9e-11799.09Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MD NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASG SSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

A0A1S3CLW7 nuclear transcription factor Y subunit C-17.7e-11899.55Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASG SSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

A0A5D3BF73 Nuclear transcription factor Y subunit C-11.7e-11799.54Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQ
        EDGSYASG SSGQGNLDGQ
Subjt:  EDGSYASGGSSGQGNLDGQ

A0A6J1C352 nuclear transcription factor Y subunit C-1-like1.3e-11799.09Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASGGSSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

A0A6J1JJG4 nuclear transcription factor Y subunit C-11.2e-11597.73Show/hide
Query:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
        M++NNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
Subjt:  MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL

Query:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA
        HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDPTGVYAQPPSQAWQSVWQ AA
Subjt:  HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA

Query:  EDGSYASGGSSGQGNLDGQS
        EDGSYASGGSSGQGNLDGQS
Subjt:  EDGSYASGGSSGQGNLDGQS

SwissProt top hitse value%identityAlignment
A6BLW4 Nuclear transcription factor Y subunit C-22.3e-5861.99Show/hide
Query:  PYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRR
        P  P     PA P HHLLQQQQ QLQ FW++QRQE E+   +DFKNHQLPLARIKKIMKADEDVRMISAEAP+LFAKACELFILELTIRSWLHAEENKRR
Subjt:  PYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRR

Query:  TLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQ
        TLQ+ND+AAAI RTD+FDFLVDIVPR+E K+E G       GG  GA      A+G+PYYYPPMGQPA       +  PA DP          AWQ   Q
Subjt:  TLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQ

Query:  TAAEDGSYASGGSSGQGNLDG
         AA D    + GS  +    G
Subjt:  TAAEDGSYASGGSSGQGNLDG

Q8LCG7 Nuclear transcription factor Y subunit C-23.2e-5275.18Show/hide
Query:  HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDI
        HH  QQQQQQLQMFW+ Q QEIE   DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R+W+H EENKRRTLQKNDIAAAI+RTD+
Subjt:  HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDI

Query:  FDFLVDIVPRDEIKDEAGLG---GMVGATASGVPYYY
        FDFLVDI+PRDE+K+E GLG   G + +     PYYY
Subjt:  FDFLVDIVPRDEIKDEAGLG---GMVGATASGVPYYY

Q9FMV5 Nuclear transcription factor Y subunit C-42.7e-9176.02Show/hide
Query:  DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL
        + NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL
Subjt:  DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL

Query:  FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRP
        FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRP
Subjt:  FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRP

Query:  AMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ
        AMDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG GNLD Q
Subjt:  AMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ

Q9SMP0 Nuclear transcription factor Y subunit C-11.8e-9582.48Show/hide
Query:  MDTNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
        MDTNNQ     A   P PPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
Subjt:  MDTNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI

Query:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP
        LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG PGGMMIGRPAMDP GVY QPP
Subjt:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP

Query:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ
        SQAWQSVWQT+    +D SY SGGSSGQGNLDGQ
Subjt:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ

Q9ZVL3 Nuclear transcription factor Y subunit C-34.9e-5365.17Show/hide
Query:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA
        P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Subjt:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA

Query:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ
        A+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Subjt:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ

Arabidopsis top hitse value%identityAlignment
AT1G54830.1 nuclear factor Y, subunit C33.5e-5465.17Show/hide
Query:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA
        P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Subjt:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA

Query:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ
        A+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Subjt:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ

AT1G54830.2 nuclear factor Y, subunit C33.5e-5465.17Show/hide
Query:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA
        P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAA
Subjt:  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAA

Query:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ
        A+TRTDIFDFLVDIVPR++++DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Subjt:  AITRTDIFDFLVDIVPRDEIKDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ

AT3G48590.1 nuclear factor Y, subunit C11.3e-9682.48Show/hide
Query:  MDTNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
        MDTNNQ     A   P PPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI
Subjt:  MDTNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFI

Query:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP
        LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG PGGMMIGRPAMDP GVY QPP
Subjt:  LELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPP

Query:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ
        SQAWQSVWQT+    +D SY SGGSSGQGNLDGQ
Subjt:  SQAWQSVWQTA---AEDGSYASGGSSGQGNLDGQ

AT5G63470.1 nuclear factor Y, subunit C41.9e-9276.02Show/hide
Query:  DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL
        + NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL
Subjt:  DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL

Query:  FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRP
        FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRP
Subjt:  FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRP

Query:  AMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ
        AMDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG GNLD Q
Subjt:  AMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ

AT5G63470.2 nuclear factor Y, subunit C41.9e-9276.02Show/hide
Query:  DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL
        + NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL
Subjt:  DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPIL

Query:  FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRP
        FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYYYPPMGQPA  PGGMMIGRP
Subjt:  FAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRP

Query:  AMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ
        AMDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG GNLD Q
Subjt:  AMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGGSSGQGNLDGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACCAACAATCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCTGTCCCGGCCCCTCCCTTCCACCACCTCCTTCAGCAGCAGCAGCAACAGCTTCAGAT
GTTCTGGTCCTTTCAGCGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCATCAGCTTCCTCTCGCCCGCATTAAGAAGATCATGAAAGCCGACGAGGACGTGCGTA
TGATCTCCGCCGAGGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATTCTTGAACTCACTATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTG
CAGAAGAATGATATTGCAGCTGCCATTACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGAGGCATGGT
CGGAGCTACTGCTAGCGGAGTGCCGTACTATTATCCGCCTATGGGCCAACCGGCAGGGGCTCCCGGCGGGATGATGATTGGGAGACCGGCAATGGATCCCACCGGAGTTT
ATGCTCAGCCGCCGTCCCAGGCATGGCAATCCGTGTGGCAGACCGCTGCTGAGGACGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGTAATCTTGATGGTCAGAGC
TAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAGAAGAAGATGATGAAATCTTTAAAATGCATATATAGATAGAGGCAGAGAAACGAATCGTGAAGGCTGTTACCTTATCTCAACTCTTTTCGGAGTTGTGTGTGT
GAGTCTCACCCTTCTTTCTTCTTCCTTCCTTCCTTCCTTCCATCTTCACCACTTCAAAAATTTCTTCACATTTCCCAAATCACTTCCTCAAATCTGCTAATCACTCCATC
AAATCATCCCCTCCTCCCGCATTTGGCTAACCCCTACTACAACCGCCGCCGTCGCCGGCCGATGGACACCAACAATCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGG
CCCCTGTCCCGGCCCCTCCCTTCCACCACCTCCTTCAGCAGCAGCAGCAACAGCTTCAGATGTTCTGGTCCTTTCAGCGCCAAGAAATCGAACAGGTTAACGATTTTAAA
AACCATCAGCTTCCTCTCGCCCGCATTAAGAAGATCATGAAAGCCGACGAGGACGTGCGTATGATCTCCGCCGAGGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTT
CATTCTTGAACTCACTATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCAGCTGCCATTACGAGGACCGATATCTTTGATT
TCTTAGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGAGGCATGGTCGGAGCTACTGCTAGCGGAGTGCCGTACTATTATCCGCCTATGGGCCAA
CCGGCAGGGGCTCCCGGCGGGATGATGATTGGGAGACCGGCAATGGATCCCACCGGAGTTTATGCTCAGCCGCCGTCCCAGGCATGGCAATCCGTGTGGCAGACCGCTGC
TGAGGACGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGTAATCTTGATGGTCAGAGCTAAGCAATTCTTGTGTAGATGATCTGCTGTCTGGTGCAATGAAAACAAA
ACTGATGCGTTTTGCTGATCCTGTCCAGGGTGTAAAACGAAGTGTATTTTTCTTTTTATGTTTCCTTCTTTTCGTACGGGGTTAACTTTAGAAACTTGTAAAAACTTTAA
CTAGATGTCGTCGAATTGACATTACTTTCGTTAACTTCTTGTTTCTACGTTTCTGATATGAATTGGCTTTTAACAATTTGGTTAAGATCAATTTTACCTTGTTGATATGG
GGAGCCTTATGTTGGATATCGCTGGACTCTCTGT
Protein sequenceShow/hide protein sequence
MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTL
QKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQS