; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G19300 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G19300
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:29485135..29485863
RNA-Seq ExpressionClc06G19300
SyntenyClc06G19300
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057761.1 hypothetical protein E6C27_scaffold274G00440 [Cucumis melo var. makuwa]1.9e-6370.53Show/hide
Query:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF-LHDQILAPSIHSSDSAE
        MLP S Q ED+LISSLNRHGTP S W IRTNQLA+D+IRRERRAAIASGN K RRLSYDD +D       TDFLHGDY ++F   DQI+  S  SSDS E
Subjt:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF-LHDQILAPSIHSSDSAE

Query:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF
        EKAEQVPVCLNALSYS ASSSSSSSSG  +P Q KE++A K +V  NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCLGF   E+E+F
Subjt:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

KAG6589372.1 hypothetical protein SDJN03_14795, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5965.24Show/hide
Query:  SQPEDDLISSLNRHGT----PSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDD-----TLDTDFLHGDYFNDFLHDQILAPSIHSSDSA-----
        S PEDDLISSL+RHGT     SSTW IRTN+LA DEI RERRAA+  G F  RRLS+DD      L+T+ LHG+Y+N F+ DQI+APS+ SSDS+     
Subjt:  SQPEDDLISSLNRHGT----PSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDD-----TLDTDFLHGDYFNDFLHDQILAPSIHSSDSA-----

Query:  -----EEKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPIVGEKREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEE
             EE+ E+VPVCLN LSYSSASSSSSSSSGSF P Q+KE+       NV   VG KREIGNRC+IG WEVGLA LAIASV M+IFS RCL FGAYEE
Subjt:  -----EEKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPIVGEKREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEE

Query:  ERFPFLLVPT
        ER PFLLVPT
Subjt:  ERFPFLLVPT

KGN63472.1 hypothetical protein Csa_014116 [Cucumis sativus]6.8e-5366.67Show/hide
Query:  MLPRSQPEDD--LISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD------TDF-LHGDYFNDFLHDQILAPSIHSSDSAE
        MLP SQ E+D  LIS+LNRH TPSS+W IRTNQLA++EIR ERRAAIASGN KARRLSYDD +D      T+F LHGDY ++   D      I SSD  E
Subjt:  MLPRSQPEDD--LISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD------TDF-LHGDYFNDFLHDQILAPSIHSSDSAE

Query:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF
        EKAEQ  VCLNALSYS A  SSSSSSG F+PLQMKEQ+A K  V  NV  +VGE K E  N CKIG W+VGLA LAIASV M+IFSLRCLG    EEE+F
Subjt:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

TYJ98442.1 hypothetical protein E5676_scaffold350G00430 [Cucumis melo var. makuwa]5.2e-6169.38Show/hide
Query:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF--LHDQILAPSIHSSDSA
        MLP S Q ED+LISSLNRHGTP S W IRTNQLA+D+IRRERRAAIASGN K RRLSYDD +D       TDFLHGDY ++F    DQI+  S  SSDS 
Subjt:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF--LHDQILAPSIHSSDSA

Query:  EEKAEQVPVCLNALSYSSA-SSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEE
        EEKAEQVPVCLNALSYS A SSSSSSSSG  +P Q KE++A K +V  NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCL F   E+E
Subjt:  EEKAEQVPVCLNALSYSSA-SSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEE

Query:  RFPFLLVPT
        +FPFLLVPT
Subjt:  RFPFLLVPT

XP_030937636.1 uncharacterized protein LOC115962896 [Quercus lobata]9.0e-1331.84Show/hide
Query:  IQQQFLQLVRHWNHYKAS-----------SSHLSPSPTMLPRSQPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD
        +Q QF+ L   W+ Y  S           S+H++ S   L  S P   + S   R   P   W +RTN LA +EIRRER+A I SG  K RRL   D  +
Subjt:  IQQQFLQLVRHWNHYKAS-----------SSHLSPSPTMLPRSQPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD

Query:  TDFLHG--DYFNDFLHDQILAPSIHSSDSAEEKAEQ---------VPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPIVGEKRE-IGNR
        T+   G  +   + L  +    S+   DS ++  E          +PVC      SS+SS SS SS S     +K ++  +    V   V  +R+  G  
Subjt:  TDFLHG--DYFNDFLHDQILAPSIHSSDSAEEKAEQ---------VPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPIVGEKRE-IGNR

Query:  CKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERFPFLLVPT
            +W V + WLAIAS+   I  +    FG Y +E    +LVPT
Subjt:  CKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERFPFLLVPT

TrEMBL top hitse value%identityAlignment
A0A0A0LRR5 Uncharacterized protein3.3e-5366.67Show/hide
Query:  MLPRSQPEDD--LISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD------TDF-LHGDYFNDFLHDQILAPSIHSSDSAE
        MLP SQ E+D  LIS+LNRH TPSS+W IRTNQLA++EIR ERRAAIASGN KARRLSYDD +D      T+F LHGDY ++   D      I SSD  E
Subjt:  MLPRSQPEDD--LISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD------TDF-LHGDYFNDFLHDQILAPSIHSSDSAE

Query:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF
        EKAEQ  VCLNALSYS A  SSSSSSG F+PLQMKEQ+A K  V  NV  +VGE K E  N CKIG W+VGLA LAIASV M+IFSLRCLG    EEE+F
Subjt:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

A0A5A7UWC4 Uncharacterized protein9.2e-6470.53Show/hide
Query:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF-LHDQILAPSIHSSDSAE
        MLP S Q ED+LISSLNRHGTP S W IRTNQLA+D+IRRERRAAIASGN K RRLSYDD +D       TDFLHGDY ++F   DQI+  S  SSDS E
Subjt:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF-LHDQILAPSIHSSDSAE

Query:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF
        EKAEQVPVCLNALSYS ASSSSSSSSG  +P Q KE++A K +V  NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCLGF   E+E+F
Subjt:  EKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERF

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

A0A5D3BFC1 Uncharacterized protein2.5e-6169.38Show/hide
Query:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF--LHDQILAPSIHSSDSA
        MLP S Q ED+LISSLNRHGTP S W IRTNQLA+D+IRRERRAAIASGN K RRLSYDD +D       TDFLHGDY ++F    DQI+  S  SSDS 
Subjt:  MLPRS-QPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD-------TDFLHGDYFNDF--LHDQILAPSIHSSDSA

Query:  EEKAEQVPVCLNALSYSSA-SSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEE
        EEKAEQVPVCLNALSYS A SSSSSSSSG  +P Q KE++A K +V  NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCL F   E+E
Subjt:  EEKAEQVPVCLNALSYSSA-SSSSSSSSGSFLPLQMKEQIADKVRV--NVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEE

Query:  RFPFLLVPT
        +FPFLLVPT
Subjt:  RFPFLLVPT

A0A7N2MM31 Uncharacterized protein4.3e-1331.84Show/hide
Query:  IQQQFLQLVRHWNHYKAS-----------SSHLSPSPTMLPRSQPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD
        +Q QF+ L   W+ Y  S           S+H++ S   L  S P   + S   R   P   W +RTN LA +EIRRER+A I SG  K RRL   D  +
Subjt:  IQQQFLQLVRHWNHYKAS-----------SSHLSPSPTMLPRSQPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLD

Query:  TDFLHG--DYFNDFLHDQILAPSIHSSDSAEEKAEQ---------VPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPIVGEKRE-IGNR
        T+   G  +   + L  +    S+   DS ++  E          +PVC      SS+SS SS SS S     +K ++  +    V   V  +R+  G  
Subjt:  TDFLHG--DYFNDFLHDQILAPSIHSSDSAEEKAEQ---------VPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPIVGEKRE-IGNR

Query:  CKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERFPFLLVPT
            +W V + WLAIAS+   I  +    FG Y +E    +LVPT
Subjt:  CKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAYEEERFPFLLVPT

M5W9W6 Uncharacterized protein2.6e-1031.67Show/hide
Query:  IQQQFLQLVRHWNHYKASS-------SHLSPSPTMLPRSQPEDD-----LISSLNRHGTPS-STWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDT
        +Q+QF+ L + W+ YK S+       S  S S TM+       D     L+SSL    +PS   W +RTN L  +EIRRERRAAI SG  K RRL   + 
Subjt:  IQQQFLQLVRHWNHYKASS-------SHLSPSPTMLPRSQPEDD-----LISSLNRHGTPS-STWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDT

Query:  LDTDFLHGDYFNDFL-------HDQILAPSIHSSDSAEE----KAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPI----VGEKR
         +T+   G     +          ++ + S   SD  ++    K++++ VC    S +S+SSSSS S        ++ ++  + R+ +  +    V  K 
Subjt:  LDTDFLHGDYFNDFL-------HDQILAPSIHSSDSAEE----KAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPI----VGEKR

Query:  EIGN--RCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAY
        E GN  RC      + + WLAIA +   IF +R  GF  Y
Subjt:  EIGN--RCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGACGAACAAGCCCCCAACATTCCTTCTCCAAATCCCAACAACAATCTCCATATTCAGCAGCAGTTCCTCCAATTGGTGCGCCATTGGAATCACTACAAAGC
TTCTTCCAGCCACCTTTCACCCTCTCCCACAATGCTCCCCCGATCACAACCAGAAGACGATCTCATCTCCTCCCTCAACCGCCATGGCACTCCATCATCCACCTGGAACA
TTCGAACCAACCAATTGGCTCACGACGAGATTCGTAGAGAACGAAGGGCCGCCATTGCTAGCGGCAACTTCAAGGCCCGAAGGCTTTCTTACGATGATACCCTAGATACT
GACTTCTTACATGGAGATTACTTCAATGACTTTCTTCACGATCAGATCCTCGCTCCATCGATTCACTCATCCGATTCGGCCGAAGAAAAAGCAGAACAAGTTCCTGTTTG
TTTAAACGCTCTGTCTTATTCCTCCGCCTCCTCCTCCTCCTCCTCCTCTTCAGGCTCCTTTCTTCCTCTGCAAATGAAAGAACAAATCGCCGACAAGGTACGAGTAAATG
TGACGCCGATTGTTGGTGAGAAGAGAGAAATTGGGAATCGGTGCAAAATAGGAAAGTGGGAAGTGGGTTTAGCTTGGCTTGCTATTGCGTCGGTTGCTATGATTATATTT
TCACTACGTTGCTTAGGGTTTGGAGCATATGAGGAAGAACGATTCCCATTTCTTTTAGTTCCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGACGAACAAGCCCCCAACATTCCTTCTCCAAATCCCAACAACAATCTCCATATTCAGCAGCAGTTCCTCCAATTGGTGCGCCATTGGAATCACTACAAAGC
TTCTTCCAGCCACCTTTCACCCTCTCCCACAATGCTCCCCCGATCACAACCAGAAGACGATCTCATCTCCTCCCTCAACCGCCATGGCACTCCATCATCCACCTGGAACA
TTCGAACCAACCAATTGGCTCACGACGAGATTCGTAGAGAACGAAGGGCCGCCATTGCTAGCGGCAACTTCAAGGCCCGAAGGCTTTCTTACGATGATACCCTAGATACT
GACTTCTTACATGGAGATTACTTCAATGACTTTCTTCACGATCAGATCCTCGCTCCATCGATTCACTCATCCGATTCGGCCGAAGAAAAAGCAGAACAAGTTCCTGTTTG
TTTAAACGCTCTGTCTTATTCCTCCGCCTCCTCCTCCTCCTCCTCCTCTTCAGGCTCCTTTCTTCCTCTGCAAATGAAAGAACAAATCGCCGACAAGGTACGAGTAAATG
TGACGCCGATTGTTGGTGAGAAGAGAGAAATTGGGAATCGGTGCAAAATAGGAAAGTGGGAAGTGGGTTTAGCTTGGCTTGCTATTGCGTCGGTTGCTATGATTATATTT
TCACTACGTTGCTTAGGGTTTGGAGCATATGAGGAAGAACGATTCCCATTTCTTTTAGTTCCAACTTGA
Protein sequenceShow/hide protein sequence
MEDDEQAPNIPSPNPNNNLHIQQQFLQLVRHWNHYKASSSHLSPSPTMLPRSQPEDDLISSLNRHGTPSSTWNIRTNQLAHDEIRRERRAAIASGNFKARRLSYDDTLDT
DFLHGDYFNDFLHDQILAPSIHSSDSAEEKAEQVPVCLNALSYSSASSSSSSSSGSFLPLQMKEQIADKVRVNVTPIVGEKREIGNRCKIGKWEVGLAWLAIASVAMIIF
SLRCLGFGAYEEERFPFLLVPT