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Clc07G00210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G00210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionzinc transporter 5
Genome locationClcChr07:252511..253346
RNA-Seq ExpressionClc07G00210
SyntenyClc07G00210
Gene Ontology termsNA
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY40724.1 hypothetical protein CUMW_054210 [Citrus unshiu]4.2e-3252.32Show/hide
Query:  LAALLCVVAVIPRMEAQGWGHP---PPLLPPRPLCSSQFALASYACARLPVNP-DPIPIPPPPSP------DVEEGNGHGHGHGHRHHHGRHHHSQSPVA
        +A  + V+AV+P+ME Q    P   PP  PPRPLC+SQFAL +YAC+ LP NP  P+P P PPSP      D E    HGH HGHRH HG   H ++P  
Subjt:  LAALLCVVAVIPRMEAQGWGHP---PPLLPPRPLCSSQFALASYACARLPVNP-DPIPIPPPPSP------DVEEGNGHGHGHGHRHHHGRHHHSQSPVA

Query:  EECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRI
        E CCRW +QVD ECVC+ LV L  FL RP H +TV + + C VTY+C+GR+
Subjt:  EECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRI

KAG6571480.1 hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5065.62Show/hide
Query:  MGRFKIAFLLAALLCVVA-VIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSP-----DVEEGNGHGHGHGHR--HHHGRHH
        MGR + A+ LAALL V+A +IP ++AQ W +     PP+PLCSSQFALASYACARLP+NP+P+PI PP SP     D +  + H HGHGH   HHHG HH
Subjt:  MGRFKIAFLLAALLCVVA-VIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSP-----DVEEGNGHGHGHGHR--HHHGRHH

Query:  HSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI
         S+SP+ EECCRWARQVDSECVC+AL HLANF+VRPSH FTVAIT++C+VTYSC GRI I
Subjt:  HSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI

XP_015891580.1 uncharacterized protein DDB_G0272724 [Ziziphus jujuba]6.4e-3353.24Show/hide
Query:  VVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGHRHHHG-----RHHHSQSPVAEECCRWARQVD
        ++ ++P++E+Q      P + PRPLC+SQFALASYAC+ +P  P P   P PPSP    G+ HGHGHGHRH HG     RH H +SP  E CCRW +Q+D
Subjt:  VVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGHRHHHG-----RHHHSQSPVAEECCRWARQVD

Query:  SECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGR
        S+CVC+ LVHL NFL RP+H ++V + D C VT+SC GR
Subjt:  SECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGR

XP_022155619.1 uncharacterized protein LOC111022709 [Momordica charantia]2.0e-6376.88Show/hide
Query:  MGRFKIAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHG--------HRHHHGRHH
        MGRFKIA LLAA LCV+ +IP+ME Q W  P PLLPPRPLCSSQFALASYACARLP+NP+PIPI PPPSP  E+G+GHGHGHG        H+HHH R H
Subjt:  MGRFKIAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHG--------HRHHHGRHH

Query:  HSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI
        H+ SPVAEECCRWAR+VDSECVC+AL+HLANFL+RPSHAFTVAITD+CIVTYSCNGRI I
Subjt:  HSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI

XP_022967638.1 uncharacterized protein LOC111467082 [Cucurbita maxima]4.7e-5267.52Show/hide
Query:  MGRFKIAFLLAALLCVVAVI-PRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGH----RHHHGRHHHSQ
        MGR + A+  AALL V+A++ P++EAQ W +     PP+PLCSSQFALASYACARLP+N +P+PI PPPSP VEEG+ HGH HGH     HHHG HH ++
Subjt:  MGRFKIAFLLAALLCVVAVI-PRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGH----RHHHGRHHHSQ

Query:  SPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI
        SP+ EECCRWARQVD+ECVC+AL HLANF+VRPSH FTVAIT++CIVTYSC GRI I
Subjt:  SPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI

TrEMBL top hitse value%identityAlignment
A0A2H5NKN0 Uncharacterized protein2.0e-3252.32Show/hide
Query:  LAALLCVVAVIPRMEAQGWGHP---PPLLPPRPLCSSQFALASYACARLPVNP-DPIPIPPPPSP------DVEEGNGHGHGHGHRHHHGRHHHSQSPVA
        +A  + V+AV+P+ME Q    P   PP  PPRPLC+SQFAL +YAC+ LP NP  P+P P PPSP      D E    HGH HGHRH HG   H ++P  
Subjt:  LAALLCVVAVIPRMEAQGWGHP---PPLLPPRPLCSSQFALASYACARLPVNP-DPIPIPPPPSP------DVEEGNGHGHGHGHRHHHGRHHHSQSPVA

Query:  EECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRI
        E CCRW +QVD ECVC+ LV L  FL RP H +TV + + C VTY+C+GR+
Subjt:  EECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRI

A0A6J1DQT3 uncharacterized protein LOC1110227099.9e-6476.88Show/hide
Query:  MGRFKIAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHG--------HRHHHGRHH
        MGRFKIA LLAA LCV+ +IP+ME Q W  P PLLPPRPLCSSQFALASYACARLP+NP+PIPI PPPSP  E+G+GHGHGHG        H+HHH R H
Subjt:  MGRFKIAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHG--------HRHHHGRHH

Query:  HSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI
        H+ SPVAEECCRWAR+VDSECVC+AL+HLANFL+RPSHAFTVAITD+CIVTYSCNGRI I
Subjt:  HSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI

A0A6J1HVN1 uncharacterized protein LOC1114670822.3e-5267.52Show/hide
Query:  MGRFKIAFLLAALLCVVAVI-PRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGH----RHHHGRHHHSQ
        MGR + A+  AALL V+A++ P++EAQ W +     PP+PLCSSQFALASYACARLP+N +P+PI PPPSP VEEG+ HGH HGH     HHHG HH ++
Subjt:  MGRFKIAFLLAALLCVVAVI-PRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGH----RHHHGRHHHSQ

Query:  SPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI
        SP+ EECCRWARQVD+ECVC+AL HLANF+VRPSH FTVAIT++CIVTYSC GRI I
Subjt:  SPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI

A0A6P4AZX7 uncharacterized protein DDB_G02727243.1e-3353.24Show/hide
Query:  VVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGHRHHHG-----RHHHSQSPVAEECCRWARQVD
        ++ ++P++E+Q      P + PRPLC+SQFALASYAC+ +P  P P   P PPSP    G+ HGHGHGHRH HG     RH H +SP  E CCRW +Q+D
Subjt:  VVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGHRHHHG-----RHHHSQSPVAEECCRWARQVD

Query:  SECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGR
        S+CVC+ LVHL NFL RP+H ++V + D C VT+SC GR
Subjt:  SECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGR

M5W0Q1 Uncharacterized protein (Fragment)2.0e-3250.32Show/hide
Query:  IPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSP----------------DVEEGNGHGHGHGHRHHHGRHHH------SQSP
        +P+MEAQ         PPRPLC+SQFALA+YACA LP  P P+P PP P P                +   G+GHGHGHGHRH H RH H      S SP
Subjt:  IPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSP----------------DVEEGNGHGHGHGHRHHHGRHHH------SQSP

Query:  VAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI
          + CCRW  Q+D+ECVCE LVHL  FL++P+HA+TVA+ + C VTY+C   I I
Subjt:  VAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-1728.38Show/hide
Query:  PPRPLCSSQFALASYACARLPVN--PDPIPIPPPPSP---------------------------------------------------------------
        PPRPLC+SQ+ALA+YAC+RLP++  P P PI PPP+P                                                               
Subjt:  PPRPLCSSQFALASYACARLPVN--PDPIPIPPPPSP---------------------------------------------------------------

Query:  ---------------------DVEEGNGHGHGHG------------------HRHHHGRHHH---SQSPVAEECCRWARQVDSECVCEALVHLANFLVRP
                             +    N H H H                   HRHHH RHHH    ++   +ECC+W +Q+D+ECVC+ LV L   L +P
Subjt:  ---------------------DVEEGNGHGHGHG------------------HRHHHGRHHH---SQSPVAEECCRWARQVDSECVCEALVHLANFLVRP

Query:  SHAFTVAITDECIVTYSCNGRI
         H +TV + + CIVT+ C GR+
Subjt:  SHAFTVAITDECIVTYSCNGRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGTTCAAAATTGCATTCCTATTAGCAGCGCTATTGTGTGTGGTAGCTGTGATCCCCAGAATGGAGGCGCAAGGATGGGGTCACCCACCGCCGCTGTTGCCTCC
ACGCCCACTTTGTTCTTCGCAATTTGCATTGGCAAGCTACGCATGTGCGAGGCTGCCTGTGAACCCAGACCCCATCCCAATTCCTCCGCCTCCTTCGCCTGATGTGGAAG
AAGGGAACGGACATGGGCACGGCCACGGGCATCGGCATCACCACGGGCGCCACCACCACAGCCAGTCACCGGTGGCGGAGGAATGCTGCCGATGGGCTAGGCAGGTGGAT
AGCGAGTGCGTGTGCGAGGCGTTAGTTCATTTGGCTAACTTCCTGGTGCGACCCTCGCATGCGTTTACGGTGGCCATCACTGACGAATGCATTGTCACTTACTCATGCAA
CGGACGAATCACGATTTGA
mRNA sequenceShow/hide mRNA sequence
CAGACACACTCTTTAGAAGCTTTGATAATATAATGCAGGAATACCACCTAACAAGAGGCTCATTCAAAAGGGATGAGATTTAGAAAACCAACTGTTTGAAACCTAAACAA
AACTTCATCTTCTTTGCTAACTTCGTCATCGGTTTCATCCCTTACCATTTTTTTTCACTCCTCATCAAAACCCATTTCCCTCCTTTTGAGTTTGAGATATATTTATAAAT
AGACTATTCTTGATGCTCAACAATTCTATTTCAAATTATTACTTGAGAATCGGAAACAGATGAAATGGGGAGGTTCAAAATTGCATTCCTATTAGCAGCGCTATTGTGTG
TGGTAGCTGTGATCCCCAGAATGGAGGCGCAAGGATGGGGTCACCCACCGCCGCTGTTGCCTCCACGCCCACTTTGTTCTTCGCAATTTGCATTGGCAAGCTACGCATGT
GCGAGGCTGCCTGTGAACCCAGACCCCATCCCAATTCCTCCGCCTCCTTCGCCTGATGTGGAAGAAGGGAACGGACATGGGCACGGCCACGGGCATCGGCATCACCACGG
GCGCCACCACCACAGCCAGTCACCGGTGGCGGAGGAATGCTGCCGATGGGCTAGGCAGGTGGATAGCGAGTGCGTGTGCGAGGCGTTAGTTCATTTGGCTAACTTCCTGG
TGCGACCCTCGCATGCGTTTACGGTGGCCATCACTGACGAATGCATTGTCACTTACTCATGCAACGGACGAATCACGATTTGAGAGCATGCACCCCAACCACAACCACTT
TTCCTTTCCAATAACAACCCTTAATAAACCTTTTTTTTTTTTTATTTTTTACTTCTCATTTTCTAT
Protein sequenceShow/hide protein sequence
MGRFKIAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGHRHHHGRHHHSQSPVAEECCRWARQVD
SECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI