CuGenDBv2

Gene ID	Clc07G00280
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic
Genome location	ClcChr07:303303..305817
RNA-Seq Expression	Clc07G00280
Synteny	Clc07G00280
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005829 - cytosol (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003824 - catalytic activity (molecular function)
InterPro domains	IPR001509 - NAD-dependent epimerase/dehydratase IPR036291 - NAD(P)-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571471.1 Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

4.4e-195

74.75

Show/hide

Query:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL
        MAALA SSSSLF+SKPSIHLPSSLSP     SLSPIS PSAL+SSF+ISHSFL +PSSSR SNVCSFSVRASS DKK VLIVNTNSGGHAVIGFYFA+QL
Subjt:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL

Query:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS
        LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVS GGKTVWGDPAE+GKV+AGASFDVVLDNNGKDID+V                               
Subjt:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS

Query:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS
                                       RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIA+VF SWA+FRPQYMIGS
Subjt:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS

Query:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM
        GNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNI+HVRDLSSMLTLAVEKPDEAH+NIFNCVSDRAVTLDGM
Subjt:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM

Query:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ+ILGWK++TNLPEDLKERFEEYVKIGRDKK IKFELDD ILESLKVPVAA
Subjt:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

XP_022963688.1 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita moschata]

3.3e-195

74.95

Show/hide

Query:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL
        MAALA SSSSLF+SKPSIHLPSSLSP     SLSPIS  SAL+SSF+ISHSFL +PSSSR SNVCSFSVRASS DKK VLIVNTNSGGHAVIGFYFAKQL
Subjt:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL

Query:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS
        LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVS GGKTVWGDPAE+GKV+AGASFDVVLDNNGKDID+V                               
Subjt:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS

Query:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS
                                       RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIA+VF SWA+FRPQYMIGS
Subjt:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS

Query:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM
        GNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNI+HVRDLSSMLTLAVEKPDEAH+NIFNCVSDRAVTLDGM
Subjt:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM

Query:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ+ILGWK++TNLPEDLKERFEEYVKIGRDKK IKFELDDKILESLKVPVAA
Subjt:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

XP_022967430.1 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita maxima]

1.5e-195

74.95

Show/hide

Query:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL
        MAALA SSSSLF+SKPSIHLPSSLSP     S+SPIS PSAL+SSF+ISHSFL +PSSSR SNVCSFSVRASS DKK VLIVNTNSGGHAVIGFYFAKQL
Subjt:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL

Query:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS
        LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVS GGKTVWGDPAE+GKV+AGASFDVVLDNNGKDID+V                               
Subjt:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS

Query:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS
                                       RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIA+VF SWA+FRPQYMIGS
Subjt:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS

Query:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM
        GNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAH+NIFNCVSDRAVTLDGM
Subjt:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM

Query:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        AKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQ+ILGWK++TNLPEDLKERFEEYVKIGRDKK IKFELDDKILESLKVPVAA
Subjt:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

XP_038887630.1 LOW QUALITY PROTEIN: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Benincasa hispida]

5.0e-199

76.72

Show/hide

Query:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQLL
        MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPIS+PS LSSS SISHSFLSYPSS RPSNVCSFSVRA+S D KKVLIVNTNSGGHAVIGFYFAKQLL
Subjt:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQLL

Query:  GSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSM
        GSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKV+AGASFDVVLDNNGKDIDTV                                
Subjt:  GSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSM

Query:  IININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGSG
                                      RPVIDWAK  GVKQFLFISSAGIYKPTDEPPHVEGDPVK +AGHVGVE+YIA+VFGSWAIFRPQYMIGSG
Subjt:  IININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGSG

Query:  NNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMA
        NNKDCEEWFFDR                              IV++R VPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMA
Subjt:  NNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMA

Query:  KLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        KLCAQAAG  V+IVH+DPKAVGVDAKKAFPFRNMHF+AEPRAAQDILGWK+TTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
Subjt:  KLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

XP_038888331.1 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Benincasa hispida]

4.3e-203

78.14

Show/hide

Query:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQLL
        MAALASSSSLFSSKPSIHLPSSLSPSFP LSLSPIS+PS LSSS SISHSFLSYP S RPSNVCSFSVRA+S DKKKVLIVNTNSGGHAVIGFYFAKQLL
Subjt:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQLL

Query:  GSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSM
        GSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKV+AGASFDVVLDNNGKDIDTV                                
Subjt:  GSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSM

Query:  IININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGSG
                                      RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIA+VFGSWAIFRPQYMIGSG
Subjt:  IININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGSG

Query:  NNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMA
        NNKDCEEWFFDR                              IVR+RPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMA
Subjt:  NNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMA

Query:  KLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        KLCAQAAGRPV+IVH+DPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWK TTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
Subjt:  KLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KE82 Epimerase domain-containing protein

1.0e-189

73.25

Show/hide

Query:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHS-----FLSYPSSS--RPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGF
        MAAL  SSSLFSSKPSI+ PSS+SPSFP  SLSPIS  S +SSSFSISHS     + S+ SSS  RPS V SFSVRASS  KKKVLIVNTNSGGHAVIGF
Subjt:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHS-----FLSYPSSS--RPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGF

Query:  YFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLI
        YFAKQLLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVSGGGKTVWGDPAEIGKV+ GASFDVVLDNNGKDIDTV                         
Subjt:  YFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLI

Query:  SIHLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRP
                                             RPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGDPVKADAGHVGVE+YIA+VF SWA+FRP
Subjt:  SIHLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRP

Query:  QYMIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRA
        QYMIGSGNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVS RA
Subjt:  QYMIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRA

Query:  VTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVA
        VTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ+ILGW+ TTNLPEDLKERFEEYVKIGRDKK IKFELDDKILESL VPVA
Subjt:  VTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVA

Query:  A
        A
Subjt:  A

A0A1S3BLW3 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic

5.7e-193

74.75

Show/hide

Query:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHS-FLS-YPSSS---RPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYF
        MAAL  SSSLFSSKPSI+ PS +SPSF PLSLSPIS  S +SSSFSISHS FLS Y SSS   RPS VCSFSVRASS  KKKVLIVNTNSGGHAVIGFYF
Subjt:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHS-FLS-YPSSS---RPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYF

Query:  AKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISI
        AK+LLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVSGGGKTVWGDPAEIGKVL GASFDVVLDNNGKDIDTV                           
Subjt:  AKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISI

Query:  HLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQY
                                           RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+A+VF SWAIFRPQY
Subjt:  HLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQY

Query:  MIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVT
        MIGSGNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCV+DRAVT
Subjt:  MIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVT

Query:  LDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        LDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ+ILGWK+TTNLPEDLKERFEEYVKIGRDKK IKFELDDKILESLKVPVAA
Subjt:  LDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

A0A5D3E2H3 Chloroplast stem-loop binding protein of 41 kDa a

5.7e-193

74.75

Show/hide

Query:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHS-FLS-YPSSS---RPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYF
        MAAL  SSSLFSSKPSI+ PS +SPSF PLSLSPIS  S +SSSFSISHS FLS Y SSS   RPS VCSFSVRASS  KKKVLIVNTNSGGHAVIGFYF
Subjt:  MAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHS-FLS-YPSSS---RPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYF

Query:  AKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISI
        AK+LLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVSGGGKTVWGDPAEIGKVL GASFDVVLDNNGKDIDTV                           
Subjt:  AKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISI

Query:  HLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQY
                                           RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+A+VF SWAIFRPQY
Subjt:  HLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQY

Query:  MIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVT
        MIGSGNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCV+DRAVT
Subjt:  MIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVT

Query:  LDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        LDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ+ILGWK+TTNLPEDLKERFEEYVKIGRDKK IKFELDDKILESLKVPVAA
Subjt:  LDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

A0A6J1HIM8 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic

1.6e-195

74.95

Show/hide

Query:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL
        MAALA SSSSLF+SKPSIHLPSSLSP     SLSPIS  SAL+SSF+ISHSFL +PSSSR SNVCSFSVRASS DKK VLIVNTNSGGHAVIGFYFAKQL
Subjt:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL

Query:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS
        LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVS GGKTVWGDPAE+GKV+AGASFDVVLDNNGKDID+V                               
Subjt:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS

Query:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS
                                       RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIA+VF SWA+FRPQYMIGS
Subjt:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS

Query:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM
        GNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNI+HVRDLSSMLTLAVEKPDEAH+NIFNCVSDRAVTLDGM
Subjt:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM

Query:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ+ILGWK++TNLPEDLKERFEEYVKIGRDKK IKFELDDKILESLKVPVAA
Subjt:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

A0A6J1HUG4 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic

7.3e-196

74.95

Show/hide

Query:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL
        MAALA SSSSLF+SKPSIHLPSSLSP     S+SPIS PSAL+SSF+ISHSFL +PSSSR SNVCSFSVRASS DKK VLIVNTNSGGHAVIGFYFAKQL
Subjt:  MAALA-SSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQL

Query:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS
        LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVS GGKTVWGDPAE+GKV+AGASFDVVLDNNGKDID+V                               
Subjt:  LGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLS

Query:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS
                                       RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIA+VF SWA+FRPQYMIGS
Subjt:  MIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGS

Query:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM
        GNNKDCEEWFFDR                              IVRDRP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAH+NIFNCVSDRAVTLDGM
Subjt:  GNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGM

Query:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        AKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQ+ILGWK++TNLPEDLKERFEEYVKIGRDKK IKFELDDKILESLKVPVAA
Subjt:  AKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

SwissProt top hits

e value

%identity

Alignment

Q9LYA9 Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic

3.5e-155

62.05

Show/hide

Query:  MAALASSSSLFSSKPSIHLPSSL-SPSFPPLSL-SPISYPSALSSSFSISHSFLSYP-SSSRPSNVCSFSVRASS-PDKKKVLIVNTNSGGHAVIGFYFA
        MAAL+SSS  FSSK +  + + L  PS    SL S  S  S+LSSS S S S L++   +SR  +   F+V+ASS  +KK VLIVNTNSGGHAVIGFYFA
Subjt:  MAALASSSSLFSSKPSIHLPSSL-SPSFPPLSL-SPISYPSALSSSFSISHSFLSYP-SSSRPSNVCSFSVRASS-PDKKKVLIVNTNSGGHAVIGFYFA

Query:  KQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIH
        K+LL +GH VTILTVG+ESS+KMKKPPFNRFSEIVSGGGKTVWG+PA +  V+ G +FDVVLDNNGKD+DTV                            
Subjt:  KQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIH

Query:  LLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYM
                                          RPV+DWAKSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VE+Y+A+ FG+WA FRPQYM
Subjt:  LLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYM

Query:  IGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTL
        IGSGNNKDCEEWFFDR                              IVRDR VPIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  NIFNCVSDRAVTL
Subjt:  IGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTL

Query:  DGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        DGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA+D+LGW++ TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Subjt:  DGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

Q9SA52 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic

3.9e-37

28.77

Show/hide

Query:  SSPDKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVW--GDPAE---IGKVLAGASFDVVLDNNGKDI
        S+  +KK+LI+    GG   IG + ++ L+  GH+VT+ T G+  S   K+ P     +      K +   GD  +   +   L+   FDVV D NG++ 
Subjt:  SSPDKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVW--GDPAE---IGKVLAGASFDVVLDNNGKDI

Query:  DTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEG
        + V  +  + P                                                                 ++Q+++ SSAG+Y  +D  PH E 
Subjt:  DTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEG

Query:  DPVKADAGHVG---VEEYIAKVFGSWAIFRPQYMIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIA
        D V   + H G    E  +     +W   RP Y+ G  N    EEWFF     HR K                     AG    RP+P+P SG+Q++ + 
Subjt:  DPVKADAGHVG---VEEYIAKVFGSWAIFRPQYMIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIA

Query:  HVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKE
        HV+DL++   L V   ++A   IFN   ++ VT DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK   +L E L +
Subjt:  HVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKE

Query:  RFEEYVKIGRDKKPIKFELDDKIL
         +      G  +K   F  DD IL
Subjt:  RFEEYVKIGRDKKPIKFELDDKIL

Arabidopsis top hits

e value

%identity

Alignment

AT1G09340.1 chloroplast RNA binding

2.8e-38

28.77

Show/hide

Query:  SSPDKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVW--GDPAE---IGKVLAGASFDVVLDNNGKDI
        S+  +KK+LI+    GG   IG + ++ L+  GH+VT+ T G+  S   K+ P     +      K +   GD  +   +   L+   FDVV D NG++ 
Subjt:  SSPDKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVW--GDPAE---IGKVLAGASFDVVLDNNGKDI

Query:  DTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEG
        + V  +  + P                                                                 ++Q+++ SSAG+Y  +D  PH E 
Subjt:  DTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEG

Query:  DPVKADAGHVG---VEEYIAKVFGSWAIFRPQYMIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIA
        D V   + H G    E  +     +W   RP Y+ G  N    EEWFF     HR K                     AG    RP+P+P SG+Q++ + 
Subjt:  DPVKADAGHVG---VEEYIAKVFGSWAIFRPQYMIGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIA

Query:  HVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKE
        HV+DL++   L V   ++A   IFN   ++ VT DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK   +L E L +
Subjt:  HVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKE

Query:  RFEEYVKIGRDKKPIKFELDDKIL
         +      G  +K   F  DD IL
Subjt:  RFEEYVKIGRDKKPIKFELDDKIL

AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa

2.5e-156

62.05

Show/hide

Query:  MAALASSSSLFSSKPSIHLPSSL-SPSFPPLSL-SPISYPSALSSSFSISHSFLSYP-SSSRPSNVCSFSVRASS-PDKKKVLIVNTNSGGHAVIGFYFA
        MAAL+SSS  FSSK +  + + L  PS    SL S  S  S+LSSS S S S L++   +SR  +   F+V+ASS  +KK VLIVNTNSGGHAVIGFYFA
Subjt:  MAALASSSSLFSSKPSIHLPSSL-SPSFPPLSL-SPISYPSALSSSFSISHSFLSYP-SSSRPSNVCSFSVRASS-PDKKKVLIVNTNSGGHAVIGFYFA

Query:  KQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIH
        K+LL +GH VTILTVG+ESS+KMKKPPFNRFSEIVSGGGKTVWG+PA +  V+ G +FDVVLDNNGKD+DTV                            
Subjt:  KQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIH

Query:  LLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYM
                                          RPV+DWAKSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VE+Y+A+ FG+WA FRPQYM
Subjt:  LLSMIININKISLFMGDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYM

Query:  IGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTL
        IGSGNNKDCEEWFFDR                              IVRDR VPIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  NIFNCVSDRAVTL
Subjt:  IGSGNNKDCEEWFFDRTSTHRYKPVKYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTL

Query:  DGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA
        DGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA+D+LGW++ TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Subjt:  DGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCCATCTCAAAATTCTTTGATTCCATGGCTGCTCTTGCTTCCTCATCTTCCCTCTTCTCCTCTAAGCCCTCCATCCATCTTCCATCCTCCCTTTCTCCTTCTTTTCC
TCCTCTCTCACTCTCTCCTATCTCTTACCCTTCTGCTCTTTCATCTTCTTTCTCCATTTCCCATTCTTTTCTCTCTTACCCTTCATCTTCTCGACCCTCCAATGTCTGCT
CCTTCAGTGTCAGGGCTAGCTCTCCTGACAAGAAGAAAGTCTTGATTGTCAACACAAACAGCGGAGGACATGCAGTCATTGGCTTCTATTTTGCAAAACAGCTTCTGGGC
TCCGGCCATGAGGTCACAATCTTGACTGTCGGTGAAGAGAGTTCTGATAAGATGAAGAAACCCCCATTCAACAGATTCTCAGAAATTGTGAGTGGTGGAGGCAAGACAGT
ATGGGGAGATCCAGCAGAAATTGGAAAGGTTCTGGCAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAAGACATTGATACTGTGAGGTTTGTGACTTCATCAT
TTCCAACTAAATCTGAATTTCTACTACTTTTTCCCATGCTCTCTGGTTTCTTGATATCAATCCACCTTTTAAGCATGATAATAAACATAAATAAAATCTCTCTGTTTATG
GGGGATGAAAATCATATGCCAGACAAACCAAATCATGAAGATTACTATTTTGTTGACAGGCCTGTTATTGATTGGGCAAAGAGCTCTGGTGTGAAGCAGTTTCTATTTAT
CAGCAGTGCTGGAATTTATAAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGATCCTGTTAAAGCTGATGCTGGTCATGTTGGTGTTGAAGAATATATTGCAAAGGTTT
TCGGCAGCTGGGCTATCTTCCGTCCACAGTACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGATCGTACGAGCACACATCGTTATAAACCTGTA
AAGTATTTAGACATTTCTAACTTGATTAATGAGCTCATGGATTTGTATATCTCCAATGCAGGAATCGTCCGGGATAGACCGGTTCCAATCCCAGGCTCCGGTATGCAGCT
GACAAACATTGCACATGTCAGGGACTTGTCTTCTATGTTGACATTGGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGTGTAAGCGATCGTGCCGTGA
CGCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGCCGTCCAGTTAACATTGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTC
AGGAATATGCATTTCTATGCGGAGCCAAGAGCAGCCCAGGATATTTTAGGGTGGAAAGCTACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAA
GATTGGTAGAGACAAGAAGCCTATTAAGTTTGAGTTAGATGATAAGATACTTGAGTCCCTAAAAGTTCCAGTAGCTGCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPISKFFDSMAALASSSSLFSSKPSIHLPSSLSPSFPPLSLSPISYPSALSSSFSISHSFLSYPSSSRPSNVCSFSVRASSPDKKKVLIVNTNSGGHAVIGFYFAKQLLG
SGHEVTILTVGEESSDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVLAGASFDVVLDNNGKDIDTVRFVTSSFPTKSEFLLLFPMLSGFLISIHLLSMIININKISLFM
GDENHMPDKPNHEDYYFVDRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDPVKADAGHVGVEEYIAKVFGSWAIFRPQYMIGSGNNKDCEEWFFDRTSTHRYKPV
KYLDISNLINELMDLYISNAGIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPF
RNMHFYAEPRAAQDILGWKATTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA

Clc07G00280 (gene) of Watermelon (cordophanus) v2 genome