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Clc07G00340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G00340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNon-specific lipid-transfer protein-like protein
Genome locationClcChr07:356216..358808
RNA-Seq ExpressionClc07G00340
SyntenyClc07G00340
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR043325 - Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647327.1 hypothetical protein Csa_003214 [Cucumis sativus]2.4e-3575.42Show/hide
Query:  INESIIF--LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALA
        I ESII   +V+VGLSMSH SLGQS GCTTALI+L+PCLTYI+ + GT++S    TPSSSCCSRLATV+QS+P+CLCSAL+ GGAAASLGVTINQTRAL 
Subjt:  INESIIF--LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALA

Query:  LPAACRLQTPPPTRCDGM
        LPAACRLQTPPP+RC+ M
Subjt:  LPAACRLQTPPPTRCDGM

XP_008449442.1 PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo]2.4e-3576.52Show/hide
Query:  INESIIFL-VIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALAL
        I ESII + V+VGLSMSH SLGQS GCTTALI+L+PCLTYI+ + GT+S+    TPSSSCCSRLAT+VQS+P+CLCSAL+ GGAAASLGVTINQTRAL L
Subjt:  INESIIFL-VIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        PAACRLQTPPP+RC+
Subjt:  PAACRLQTPPPTRCD

XP_023534720.1 non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo]7.0e-3574.78Show/hide
Query:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL
        MGI ES +FL++V   MSH S+ QS+GCTTALISL+PCLTYI+ S G+S+S   T PSSSCCSRLATVVQS+PQCLCSALNGGAA SLGVTIN+TRAL L
Subjt:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        PAAC +QTPPP+RCD
Subjt:  PAACRLQTPPPTRCD

XP_031743860.1 non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus]4.1e-3575.86Show/hide
Query:  INESIIF--LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALA
        I ESII   +V+VGLSMSH SLGQS GCTTALI+L+PCLTYI+ + GT++S    TPSSSCCSRLATV+QS+P+CLCSAL+ GGAAASLGVTINQTRAL 
Subjt:  INESIIF--LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALA

Query:  LPAACRLQTPPPTRCD
        LPAACRLQTPPP+RC+
Subjt:  LPAACRLQTPPPTRCD

XP_038888862.1 non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida]2.0e-4286.09Show/hide
Query:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL
        MGINESII +V+VGLSMSHGSLGQSSGCTTALISL+PCLTYI T+TG      TT+PSSSCCSRLATVVQS+P+CLCSALNGGAAASLGVTINQTRALAL
Subjt:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        PAACRLQTPPPTRC+
Subjt:  PAACRLQTPPPTRCD

TrEMBL top hitse value%identityAlignment
A0A0A0KGC1 AAI domain-containing protein3.1e-3675.42Show/hide
Query:  INESIIF--LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALA
        I ESII   +V+VGLSMSH SLGQS GCTTALI+L+PCLTYI+ + GT++S    TPSSSCCSRLATV+QS+P+CLCSAL+ GGAAASLGVTINQTRAL 
Subjt:  INESIIF--LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALA

Query:  LPAACRLQTPPPTRCDGM
        LPAACRLQTPPP+RC+G+
Subjt:  LPAACRLQTPPPTRCDGM

A0A1S3BLF1 non-specific lipid-transfer protein-like protein At2g138201.2e-3576.52Show/hide
Query:  INESIIFL-VIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALAL
        I ESII + V+VGLSMSH SLGQS GCTTALI+L+PCLTYI+ + GT+S+    TPSSSCCSRLAT+VQS+P+CLCSAL+ GGAAASLGVTINQTRAL L
Subjt:  INESIIFL-VIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        PAACRLQTPPP+RC+
Subjt:  PAACRLQTPPPTRCD

A0A5A7UN30 Non-specific lipid-transfer protein-like protein6.0e-3278Show/hide
Query:  MSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALALPAACRLQTPPPTRCD
        MSH SLGQS GCTTALI+L+PCLTYI+ + GT+S+    TPSSSCCSRLAT+VQS+P+CLCSAL+ GGAAASLGVTINQTRAL LPAACRLQTPPP+RC+
Subjt:  MSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALN-GGAAASLGVTINQTRALALPAACRLQTPPPTRCD

A0A6J1EXB7 non-specific lipid-transfer protein-like protein At2g138201.3e-3473.91Show/hide
Query:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL
        MGI ES +FL++V   MSH S+ QS+GCTTALISL+PCLTYI+ S G+S+S   T PSSSCCSRLATVVQS+PQCLCSALNGGAA SLGVTIN+TRAL L
Subjt:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        PAAC +QTPPP+RC+
Subjt:  PAACRLQTPPPTRCD

A0A6J1K123 non-specific lipid-transfer protein-like protein At2g138208.4e-3472.17Show/hide
Query:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL
        MGI ES +FL++V   MSH S+ QS GCTTALISL+PCLTY   +TG+  S  +T PSSSCCSRLATVVQS+PQCLCSALNGGAA SLGVTIN+TRAL L
Subjt:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        PAAC +QTPPP+RC+
Subjt:  PAACRLQTPPPTRCD

SwissProt top hitse value%identityAlignment
F4HZB9 Non-specific lipid transfer protein GPI-anchored 191.2e-1341.67Show/hide
Query:  IFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQ
        I  +++   +  G+    +GC   L SL+PCL Y++   G SSS     PS SCC + +TVVQS P+CLCS +N   ++  G   N+T AL LP AC +Q
Subjt:  IFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQ

Query:  TPPPTRCD
        TP P+ C+
Subjt:  TPPPTRCD

Q2PE59 Non-specific lipid transfer protein GPI-anchored 261.1e-1440.95Show/hide
Query:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP
        ++ + L      +   S CT  LIS+APCL++I+ +        T+ PS  CC++LA VV+   +CLC  L+GG  + LG+ +N+T+ALALP AC ++TP
Subjt:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP

Query:  PPTRC
        P +RC
Subjt:  PPTRC

Q7EB72 Non-specific lipid transfer protein GPI-anchored 153.4e-1646.36Show/hide
Query:  SIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACR
        +I F+ +V    S      SS C + L +L+PCL+YI   TG S     TTPS  CCSRL +V++S PQC+CSA+N     ++G+ IN+T+AL LP AC 
Subjt:  SIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACR

Query:  LQTPPPTRCD
        +QTPP T+C+
Subjt:  LQTPPPTRCD

Q9FY78 Non-specific lipid transfer protein GPI-anchored 291.9e-1138.89Show/hide
Query:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP
        L+++ LS+S   +  +S C T +I+L PCL +IS   GT+      TP++SCCS L  ++ ++P CLC  L     A LG+ +N T++  LP AC+L  P
Subjt:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP

Query:  PPTRCDGM
        P + CD +
Subjt:  PPTRCDGM

Q9LJ86 Non-specific lipid transfer protein GPI-anchored 51.5e-1946.96Show/hide
Query:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL
        M +   ++FL +    MS   +   S CT ALIS++PCL YI   TG S     T+P+  CC++L+ VVQS P CLC  LNGG  + LG+ +NQT+AL L
Subjt:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        P AC +QTPP +RC+
Subjt:  PAACRLQTPPPTRCD

Arabidopsis top hitse value%identityAlignment
AT1G03103.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.6e-1541.67Show/hide
Query:  IFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQ
        I  +++   +  G+    +GC   L SL+PCL Y++   G SSS     PS SCC + +TVVQS P+CLCS +N   ++  G   N+T AL LP AC +Q
Subjt:  IFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQ

Query:  TPPPTRCD
        TP P+ C+
Subjt:  TPPPTRCD

AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.4e-1746.36Show/hide
Query:  SIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACR
        +I F+ +V    S      SS C + L +L+PCL+YI   TG S     TTPS  CCSRL +V++S PQC+CSA+N     ++G+ IN+T+AL LP AC 
Subjt:  SIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACR

Query:  LQTPPPTRCD
        +QTPP T+C+
Subjt:  LQTPPPTRCD

AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.1e-2046.96Show/hide
Query:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL
        M +   ++FL +    MS   +   S CT ALIS++PCL YI   TG S     T+P+  CC++L+ VVQS P CLC  LNGG  + LG+ +NQT+AL L
Subjt:  MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALAL

Query:  PAACRLQTPPPTRCD
        P AC +QTPP +RC+
Subjt:  PAACRLQTPPPTRCD

AT4G14815.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.8e-1640.95Show/hide
Query:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP
        ++ + L      +   S CT  LIS+APCL++I+ +        T+ PS  CC++LA VV+   +CLC  L+GG  + LG+ +N+T+ALALP AC ++TP
Subjt:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP

Query:  PPTRC
        P +RC
Subjt:  PPTRC

AT5G09370.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-1238.89Show/hide
Query:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP
        L+++ LS+S   +  +S C T +I+L PCL +IS   GT+      TP++SCCS L  ++ ++P CLC  L     A LG+ +N T++  LP AC+L  P
Subjt:  LVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTP

Query:  PPTRCDGM
        P + CD +
Subjt:  PPTRCDGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTAATGAGTCAATTATTTTCCTAGTTATTGTGGGTTTGAGCATGAGCCATGGGAGCTTGGGTCAGTCAAGTGGATGCACCACGGCCTTGATAAGCTTAGCTCC
ATGCTTAACCTACATCAGTACTTCCACCGGAACCAGCTCTTCGCCGCCCACTACTACTCCATCCTCCTCTTGCTGCTCACGCCTTGCCACCGTTGTTCAATCCCGGCCAC
AATGCCTTTGCTCCGCCCTCAATGGTGGCGCCGCCGCTTCTCTTGGTGTCACCATCAACCAGACTCGAGCTCTCGCGCTTCCTGCTGCTTGTCGTCTTCAAACCCCACCA
CCCACCCGTTGTGATGGTATGATATTTGACGAAGGATATCATGGATGTGAAATGAAAATACAGATAATGGCAATGGAGAAGGTGCTCCAACAATATCCCCGCTATTTAAT
GTTTACTACATCGATCTATATCATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTAATGAGTCAATTATTTTCCTAGTTATTGTGGGTTTGAGCATGAGCCATGGGAGCTTGGGTCAGTCAAGTGGATGCACCACGGCCTTGATAAGCTTAGCTCC
ATGCTTAACCTACATCAGTACTTCCACCGGAACCAGCTCTTCGCCGCCCACTACTACTCCATCCTCCTCTTGCTGCTCACGCCTTGCCACCGTTGTTCAATCCCGGCCAC
AATGCCTTTGCTCCGCCCTCAATGGTGGCGCCGCCGCTTCTCTTGGTGTCACCATCAACCAGACTCGAGCTCTCGCGCTTCCTGCTGCTTGTCGTCTTCAAACCCCACCA
CCCACCCGTTGTGATGGTATGATATTTGACGAAGGATATCATGGATGTGAAATGAAAATACAGATAATGGCAATGGAGAAGGTGCTCCAACAATATCCCCGCTATTTAAT
GTTTACTACATCGATCTATATCATTCTTTAA
Protein sequenceShow/hide protein sequence
MGINESIIFLVIVGLSMSHGSLGQSSGCTTALISLAPCLTYISTSTGTSSSPPTTTPSSSCCSRLATVVQSRPQCLCSALNGGAAASLGVTINQTRALALPAACRLQTPP
PTRCDGMIFDEGYHGCEMKIQIMAMEKVLQQYPRYLMFTTSIYIIL