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Clc07G00830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G00830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionbet1-like SNARE 1-1
Genome locationClcChr07:890759..893618
RNA-Seq ExpressionClc07G00830
SyntenyClc07G00830
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151976.1 bet1-like SNARE 1-1 [Cucumis sativus]5.6e-5496.64Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFV IFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

XP_008454511.1 PREDICTED: bet1-like SNARE 1-1 [Cucumis melo]1.3e-5395.8Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRAS SY+SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFV IFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

XP_022146012.1 bet1-like SNARE 1-1 [Momordica charantia]6.7e-5597.48Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFVAIFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

XP_022963635.1 bet1-like SNARE 1-1 [Cucurbita moschata]3.3e-5497.48Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFVAIFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

XP_038887294.1 bet1-like SNARE 1-1 [Benincasa hispida]3.0e-5598.32Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAAL+GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFVAIFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

TrEMBL top hitse value%identityAlignment
A0A0A0LBA5 t-SNARE coiled-coil homology domain-containing protein2.7e-5496.64Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFV IFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

A0A5A7VLV2 Bet1-like SNARE 1-16.1e-5495.8Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRAS SY+SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFV IFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

A0A6J1CYB1 bet1-like SNARE 1-13.2e-5597.48Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFVAIFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

A0A6J1HIJ8 bet1-like SNARE 1-11.6e-5497.48Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFVAIFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

A0A6J1HRZ5 bet1-like SNARE 1-11.6e-5497.48Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKM
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
         SLVALFVAIFFIVYYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

SwissProt top hitse value%identityAlignment
O35152 BET1-like protein4.5e-0634Show/hide
Query:  RASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MVSLVALFVAIFFIVYYL
        RA SS +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF TV       +  +  +  + +  FFI+ YL
Subjt:  RASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MVSLVALFVAIFFIVYYL

Q3MHP8 BET1-like protein5.9e-0635.92Show/hide
Query:  RASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMVSLVA--LFVAIFFIVYY
        RA S  +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF T+    + + K++  VA  L VA F + Y 
Subjt:  RASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMVSLVA--LFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q5RBX2 BET1-like protein2.0e-0634.95Show/hide
Query:  RASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMV--SLVALFVAIFFIVYY
        RA S  +  EI + +N+   + L  +V  LK L  DI+++ E  NR LD M +D  S  G+L+G++ RF T+    + + K++    V L VA F + Y+
Subjt:  RASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMV--SLVALFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q94CG2 Bet1-like SNARE 1-29.1e-3159.02Show/hide
Query:  RELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS
        RE R +R +LF   DG+EEG +RASSSY+    +E DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS+
Subjt:  RELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS

Query:  PKMVSLVALFVAIFFIVYYLTR
         K   L+A FV +F I+YYL R
Subjt:  PKMVSLVALFVAIFFIVYYLTR

Q9M2J9 Bet1-like SNARE 1-14.2e-4476.47Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE R  R +LFDGIEEGG+RA+SSY SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KSS +M
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
        ++LVA FV +F ++YYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A3.0e-4576.47Show/hide
Query:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM
        RE R  R +LFDGIEEGG+RA+SSY SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KSS +M
Subjt:  RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKM

Query:  VSLVALFVAIFFIVYYLTR
        ++LVA FV +F ++YYLTR
Subjt:  VSLVALFVAIFFIVYYLTR

AT4G14455.1 Target SNARE coiled-coil domain protein6.5e-3259.02Show/hide
Query:  RELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS
        RE R +R +LF   DG+EEG +RASSSY+    +E DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS+
Subjt:  RELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSS

Query:  PKMVSLVALFVAIFFIVYYLTR
         K   L+A FV +F I+YYL R
Subjt:  PKMVSLVALFVAIFFIVYYLTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTCAATATATATCTCTTACTCCCCCGTCAGGATTCGCCGATCATCTTCCTCCGTCAATTCTCAAACTTTCAGGCTTCAGCTGCTCCGACAACTGCTTCCGGAC
GATGACTCCATGGGTTTCATTCCTTGAACTGAATATAAACTGCAGGGAACTGCGCAACAATAGGGTTGCTCTCTTCGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCAT
CTTCCTACTCCTCCCATGAAATCGAGGAGCATGATAATGAAGCAGCATTGGAAGGCTTGCAAGACAGAGTTCTCCTGTTGAAGAGGTTGACAGGTGACATAAATGAGGAG
GTGGAGAGTCATAATCGCATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCAGGCACTATGGATCGATTCAAGACGGTGTTTGATCCCAAGTC
GAGCCCGAAGATGGTCTCACTAGTAGCACTTTTCGTGGCGATTTTCTTCATCGTGTACTATCTCACAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTCAATATATATCTCTTACTCCCCCGTCAGGATTCGCCGATCATCTTCCTCCGTCAATTCTCAAACTTTCAGGCTTCAGCTGCTCCGACAACTGCTTCCGGAC
GATGACTCCATGGGTTTCATTCCTTGAACTGAATATAAACTGCAGGGAACTGCGCAACAATAGGGTTGCTCTCTTCGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCAT
CTTCCTACTCCTCCCATGAAATCGAGGAGCATGATAATGAAGCAGCATTGGAAGGCTTGCAAGACAGAGTTCTCCTGTTGAAGAGGTTGACAGGTGACATAAATGAGGAG
GTGGAGAGTCATAATCGCATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCAGGCACTATGGATCGATTCAAGACGGTGTTTGATCCCAAGTC
GAGCCCGAAGATGGTCTCACTAGTAGCACTTTTCGTGGCGATTTTCTTCATCGTGTACTATCTCACAAGGTAATCCTCCTCCGTTGGGATATCGAAAGAACTCAAGCTTT
GGCCAGAAGACAATGATCACTATTGCTGCTTAGTTCTATGAGTATTATTACATTTAAGTTTGGCATAGATGTTCTGTTGATGCTTGTGTGAATATGTTTCGTTGTACCAA
ATTAAAGTTGAATGAGTTTGAAAACCAAATATCATCTGCTGCTCTCCATTAAGCTGACATTGATGGGGAGAGATATATAATCAGCAAACCAGTTTGTTACTTGATAGTTT
AATATCTCTG
Protein sequenceShow/hide protein sequence
MKIQYISLTPPSGFADHLPPSILKLSGFSCSDNCFRTMTPWVSFLELNINCRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEE
VESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMVSLVALFVAIFFIVYYLTR