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Clc07G00890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G00890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:959828..960202
RNA-Seq ExpressionClc07G00890
SyntenyClc07G00890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5936724.1 hypothetical protein HYC85_024230 [Camellia sinensis]3.5e-2954.84Show/hide
Query:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD-YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTL
        R ++EFRTPQHPSLG NNWGGASPLLAR+IP E +E RY +LNS RTRDEIFP   DD  Y P +  P+L C     K  +       +  P K K  TL
Subjt:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD-YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTL

Query:  LGSNSRKKWFKKWDYQNRWPQGWC
           + R++WF KWD  NRWPQGWC
Subjt:  LGSNSRKKWFKKWDYQNRWPQGWC

KAF9862413.1 hypothetical protein H0E87_013307 [Populus deltoides]6.4e-3154.47Show/hide
Query:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDDYLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTLL
        R  + FRTPQHPSLG  NWGGASPLLARNIP E++E +YL++NS RT DEIFP  +D +YLP +YTP+ +   + S+  KG  +L K   P +    TL 
Subjt:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDDYLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTLL

Query:  GSNSRKKWFKKWDYQNRWPQGWC
         ++ RK+WF +WD +NRWPQGWC
Subjt:  GSNSRKKWFKKWDYQNRWPQGWC

KAG6571514.1 hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sororia]7.0e-5484.25Show/hide
Query:  MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD---YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKR
        MR I+EFRTPQHPSL KNNWGGASPLLARNIPH+T+ELRYLKLNS RTRDEIFPLLEDD    YLPVSY PRLQ LE KS+ VKGSS LSKLSLPW+GKR
Subjt:  MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD---YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKR

Query:  KTLLGSNSRKKWFKKWDYQNRWPQGWC
        KTL G NSRKKWFK WDYQNRWPQGWC
Subjt:  KTLLGSNSRKKWFKKWDYQNRWPQGWC

KGN57931.1 hypothetical protein Csa_009875 [Cucumis sativus]1.2e-5382.81Show/hide
Query:  MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLED--DD--YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGK
        MRHIVEFRTPQHPS GKNNWGGASPLLARNIPHET+ELRYLKLN+TRTRDEIFPL ED  DD  YLP+SYT +LQ    K+K V+ +S LSKLSLPWKGK
Subjt:  MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLED--DD--YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGK

Query:  RKTLLGSNSRKKWFKKWDYQNRWPQGWC
        R+TLLGSNSRKKWFKKWDYQNRWPQGWC
Subjt:  RKTLLGSNSRKKWFKKWDYQNRWPQGWC

TYK20514.1 hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa]2.7e-5384.25Show/hide
Query:  EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD--------YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKR
        EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLN++RTRDEIFPL ED+D        YLPVSYTPRLQ LE K+K VK +S LSKLSLPWKGKR
Subjt:  EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD--------YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKR

Query:  KTLLGSNSRKKWFKKWDYQNRWPQGWC
        +TLLGSNSRKKWFKKWDYQNRWPQGWC
Subjt:  KTLLGSNSRKKWFKKWDYQNRWPQGWC

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ1 Uncharacterized protein5.8e-5482.81Show/hide
Query:  MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLED--DD--YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGK
        MRHIVEFRTPQHPS GKNNWGGASPLLARNIPHET+ELRYLKLN+TRTRDEIFPL ED  DD  YLP+SYT +LQ    K+K V+ +S LSKLSLPWKGK
Subjt:  MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLED--DD--YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGK

Query:  RKTLLGSNSRKKWFKKWDYQNRWPQGWC
        R+TLLGSNSRKKWFKKWDYQNRWPQGWC
Subjt:  RKTLLGSNSRKKWFKKWDYQNRWPQGWC

A0A5D2UEN6 Uncharacterized protein2.9e-2954.47Show/hide
Query:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDDYLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTLL
        R ++EFRTPQHPSLG NNWGGASPLLAR+IP E++E RYL+LNS R RDEIFP  + D +   + T   +  ++ +   +G   LSKL  PWK +  TL 
Subjt:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDDYLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTLL

Query:  GSNSRKKWFKKWDYQNRWPQGWC
         ++SR++WF +WD +NRWPQGWC
Subjt:  GSNSRKKWFKKWDYQNRWPQGWC

A0A5D3DAH9 Uncharacterized protein1.3e-5384.25Show/hide
Query:  EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD--------YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKR
        EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLN++RTRDEIFPL ED+D        YLPVSYTPRLQ LE K+K VK +S LSKLSLPWKGKR
Subjt:  EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD--------YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKR

Query:  KTLLGSNSRKKWFKKWDYQNRWPQGWC
        +TLLGSNSRKKWFKKWDYQNRWPQGWC
Subjt:  KTLLGSNSRKKWFKKWDYQNRWPQGWC

A0A7J7GBF1 Uncharacterized protein1.7e-2954.84Show/hide
Query:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD-YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTL
        R ++EFRTPQHPSLG NNWGGASPLLAR+IP E +E RY +LNS RTRDEIFP   DD  Y P +  P+L C     K  +       +  P K K  TL
Subjt:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDD-YLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTL

Query:  LGSNSRKKWFKKWDYQNRWPQGWC
           + R++WF KWD  NRWPQGWC
Subjt:  LGSNSRKKWFKKWDYQNRWPQGWC

A0A7J9IKX3 Uncharacterized protein3.8e-2954.47Show/hide
Query:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDDYLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTLL
        R ++EFRTPQHPSLG NNWGGASPLLAR+IP E++E RYL+LNS R RDEIFP    D +   + T   +  ++ +   +G   LSKL  PWK +  TL 
Subjt:  RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDDYLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTLL

Query:  GSNSRKKWFKKWDYQNRWPQGWC
         ++SR++WF +WD +NRWPQGWC
Subjt:  GSNSRKKWFKKWDYQNRWPQGWC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCACATAGTAGAATTTAGAACACCCCAACACCCTTCTCTTGGCAAAAACAATTGGGGTGGAGCTTCTCCTTTGCTAGCTAGAAACATCCCCCATGAAACTATTGA
ACTAAGGTATCTCAAACTCAACTCAACTCGTACTCGAGACGAAATCTTTCCTCTTCTAGAAGACGACGACTATTTGCCCGTCTCATATACGCCTCGACTACAATGTCTCG
AAAGTAAGTCGAAGGAAGTGAAAGGGAGTTCGGTTTTGTCGAAGTTGTCTTTACCATGGAAAGGGAAGAGGAAGACACTGTTAGGCTCAAATTCAAGGAAGAAATGGTTC
AAGAAATGGGATTATCAAAATAGATGGCCTCAAGGCTGGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCACATAGTAGAATTTAGAACACCCCAACACCCTTCTCTTGGCAAAAACAATTGGGGTGGAGCTTCTCCTTTGCTAGCTAGAAACATCCCCCATGAAACTATTGA
ACTAAGGTATCTCAAACTCAACTCAACTCGTACTCGAGACGAAATCTTTCCTCTTCTAGAAGACGACGACTATTTGCCCGTCTCATATACGCCTCGACTACAATGTCTCG
AAAGTAAGTCGAAGGAAGTGAAAGGGAGTTCGGTTTTGTCGAAGTTGTCTTTACCATGGAAAGGGAAGAGGAAGACACTGTTAGGCTCAAATTCAAGGAAGAAATGGTTC
AAGAAATGGGATTATCAAAATAGATGGCCTCAAGGCTGGTGCTAA
Protein sequenceShow/hide protein sequence
MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNSTRTRDEIFPLLEDDDYLPVSYTPRLQCLESKSKEVKGSSVLSKLSLPWKGKRKTLLGSNSRKKWF
KKWDYQNRWPQGWC