; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G01568 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G01568
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionlipid phosphate phosphatase epsilon 1, chloroplastic-like
Genome locationClcChr07:1647320..1647830
RNA-Seq ExpressionClc07G01568
SyntenyClc07G01568
Gene Ontology termsGO:0006487 - protein N-linked glycosylation (biological process)
GO:0008610 - lipid biosynthetic process (biological process)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0047874 - dolichyldiphosphatase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603960.1 Lipid phosphate phosphatase epsilon 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.5e-2270Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
        S+ SWL+VSQKLHT SQ           AILWYL WKAVVSEAFSANLWVQ+VV +GASGFC+GFVIYVL+NWF+D+KS+
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
XP_004143525.1 lipid phosphate phosphatase epsilon 1, chloroplastic [Cucumis sativus]1.5e-2173.08Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        S+ SWL+VSQKLHT SQ            ILWYLLWKAVVSEAFSANLWVQVVVV+GASGFCIGFVIYV +NWF+D+K
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
XP_022949988.1 lipid phosphate phosphatase epsilon 1, chloroplastic-like [Cucurbita moschata]6.5e-2270Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
        S+ SWL+VSQKLHT SQ           AILWYL WKAVVSEAFSANLWVQ+VV +GASGFC+GFVIYVL+NWF+D+KS+
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
XP_022978521.1 lipid phosphate phosphatase epsilon 1, chloroplastic-like [Cucurbita maxima]6.5e-2270Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
        S+ SWL+VSQKLHT SQ           AILWYL WKAVVSEAFSANLWVQ+VV +GASGFC+GFVIYVL+NWF+D+KS+
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
XP_023544318.1 lipid phosphate phosphatase epsilon 1, chloroplastic-like [Cucurbita pepo subsp. pepo]6.5e-2270Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
        S+ SWL+VSQKLHT SQ           AILWYL WKAVVSEAFSANLWVQ+VV +GASGFC+GFVIYVL+NWF+D+KS+
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
TrEMBL top hitse value%identityAlignment
A0A0A0KGI6 acidPPc domain-containing protein7.0e-2273.08Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        S+ SWL+VSQKLHT SQ            ILWYLLWKAVVSEAFSANLWVQVVVV+GASGFCIGFVIYV +NWF+D+K
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
A0A1S3B2G5 lipid phosphate phosphatase epsilon 1, chloroplastic-like1.6e-2173.08Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        S+ SWL+VSQKLHT SQ           +ILWYLLWKAVV+EAFS NLWVQVVVVLGASGFCIGFVIYV +NWFRD+K
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
A0A5D3CQA3 Lipid phosphate phosphatase epsilon 11.6e-2173.08Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        S+ SWL+VSQKLHT SQ           +ILWYLLWKAVV+EAFS NLWVQVVVVLGASGFCIGFVIYV +NWFRD+K
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
A0A6J1GDM9 lipid phosphate phosphatase epsilon 1, chloroplastic-like3.2e-2270Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
        S+ SWL+VSQKLHT SQ           AILWYL WKAVVSEAFSANLWVQ+VV +GASGFC+GFVIYVL+NWF+D+KS+
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
A0A6J1IMW7 lipid phosphate phosphatase epsilon 1, chloroplastic-like3.2e-2270Show/hide
Query:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
        S+ SWL+VSQKLHT SQ           AILWYL WKAVVSEAFSANLWVQ+VV +GASGFC+GFVIYVL+NWF+D+KS+
Subjt:  SHQSWLQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDKSL
SwissProt top hitse value%identityAlignment
F4J220 Lipid phosphate phosphatase epsilon 1, chloroplastic1.3e-0945.21Show/hide
Query:  LQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        L+VSQKLHT SQ            ILWY +W +++ EAF A+L VQ+ V L A+ F + F  YV+ NWF+D++
Subjt:  LQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
Q6NQL6 Lipid phosphate phosphatase epsilon 2, chloroplastic1.8e-1143.59Show/hide
Query:  SHQSWLQVSQKLHTFSQAAI----------LWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        S+ +WL+VSQKLHT SQ  +          LWY+ W ++V EAF++   VQ+ + L A+   +GF +YVL NWF+DD+
Subjt:  SHQSWLQVSQKLHTFSQAAI----------LWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
Arabidopsis top hitse value%identityAlignment
AT3G50920.1 Phosphatidic acid phosphatase (PAP2) family protein9.4e-1145.21Show/hide
Query:  LQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        L+VSQKLHT SQ            ILWY +W +++ EAF A+L VQ+ V L A+ F + F  YV+ NWF+D++
Subjt:  LQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
AT3G50920.2 Phosphatidic acid phosphatase (PAP2) family protein9.4e-1145.21Show/hide
Query:  LQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        L+VSQKLHT SQ            ILWY +W +++ EAF A+L VQ+ V L A+ F + F  YV+ NWF+D++
Subjt:  LQVSQKLHTFSQA----------AILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
AT5G66450.1 Phosphatidic acid phosphatase (PAP2) family protein1.3e-1243.59Show/hide
Query:  SHQSWLQVSQKLHTFSQAAI----------LWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        S+ +WL+VSQKLHT SQ  +          LWY+ W ++V EAF++   VQ+ + L A+   +GF +YVL NWF+DD+
Subjt:  SHQSWLQVSQKLHTFSQAAI----------LWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
AT5G66450.2 Phosphatidic acid phosphatase (PAP2) family protein1.3e-1243.59Show/hide
Query:  SHQSWLQVSQKLHTFSQAAI----------LWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK
        S+ +WL+VSQKLHT SQ  +          LWY+ W ++V EAF++   VQ+ + L A+   +GF +YVL NWF+DD+
Subjt:  SHQSWLQVSQKLHTFSQAAI----------LWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRDDK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCTCCAGGTTTTAATATCACGCAACGGAAACTCAATCTTCCTATCTATTCAGCCTGGTCGAAGCAAAACTGGATCGAGACTTTCGATTCTGTTTGTAGCAAATCT
CACCTTCCCCTCCAGACATCAATCTCATCAGTCGTGGCTACAAGTCTCACAGAAGCTCCATACTTTCAGCCAAGCTGCCATTTTATGGTATTTGCTCTGGAAGGCCGTGG
TTAGTGAAGCTTTTTCAGCAAATTTGTGGGTTCAAGTTGTTGTGGTTTTGGGAGCTTCTGGATTCTGTATAGGCTTCGTTATATATGTCTTAAGCAATTGGTTTAGGGAT
GATAAGTCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTCTCCAGGTTTTAATATCACGCAACGGAAACTCAATCTTCCTATCTATTCAGCCTGGTCGAAGCAAAACTGGATCGAGACTTTCGATTCTGTTTGTAGCAAATCT
CACCTTCCCCTCCAGACATCAATCTCATCAGTCGTGGCTACAAGTCTCACAGAAGCTCCATACTTTCAGCCAAGCTGCCATTTTATGGTATTTGCTCTGGAAGGCCGTGG
TTAGTGAAGCTTTTTCAGCAAATTTGTGGGTTCAAGTTGTTGTGGTTTTGGGAGCTTCTGGATTCTGTATAGGCTTCGTTATATATGTCTTAAGCAATTGGTTTAGGGAT
GATAAGTCATTGTAG
Protein sequenceShow/hide protein sequence
MRLQVLISRNGNSIFLSIQPGRSKTGSRLSILFVANLTFPSRHQSHQSWLQVSQKLHTFSQAAILWYLLWKAVVSEAFSANLWVQVVVVLGASGFCIGFVIYVLSNWFRD
DKSL