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Clc07G01595 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G01595
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr07:1667332..1669116
RNA-Seq ExpressionClc07G01595
SyntenyClc07G01595
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651384.1 hypothetical protein Csa_001671 [Cucumis sativus]1.5e-2051.38Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY
        LN+ T D+ LF  CKSKDDD        LG Q +  ++ + WSFKEN   T+LYWC   N + HASF VYWPE RS WL   C   NCIW+ARDDG YL 
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY

Query:  NGMQNQFEL
            N +EL
Subjt:  NGMQNQFEL

KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]1.3e-1950Show/hide
Query:  DNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQ
        D  L THCKSKDDD        LG +V+  +  Y WSFKEN   T+L+WC+F +   HASFEV+WPE +  WLE  C   NC WAA +DGF+L N  + +
Subjt:  DNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQ

Query:  FE
        FE
Subjt:  FE

KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]5.7e-2050.46Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY
        LN+ T D  LF  CKSKDDD        LG Q +  ++ + WSFKEN   T+LYWC   N + HASF V+WPE +S WL   C   NCIW+ARDDG YL 
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY

Query:  NGMQNQFEL
            N FEL
Subjt:  NGMQNQFEL

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]5.7e-2050.46Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY
        LN+ T D  LF  CKSKDDD        LG Q +  ++ + WSFKEN   T+LYWC   N + HASF V+WPE +S WL   C   NCIW+ARDDG YL 
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY

Query:  NGMQNQFEL
            N FEL
Subjt:  NGMQNQFEL

XP_004136435.1 S-protein homolog 1-like [Cucumis sativus]1.5e-2051.38Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY
        LN+ T D+ LF  CKSKDDD        LG Q +  ++ + WSFKEN   T+LYWC   N + HASF VYWPE RS WL   C   NCIW+ARDDG YL 
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY

Query:  NGMQNQFEL
            N +EL
Subjt:  NGMQNQFEL

TrEMBL top hitse value%identityAlignment
A0A1S3C8Z6 S-protein homolog1.4e-1948.65Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNE-KSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYL
        +N Q N + L  HCKSKDDD        LG  V+ NE + Y W FKEN+  T+ +WCNF +   HASFEV+WPE   +WL D C+NSNC+W A +DGF L
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNE-KSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYL

Query:  YNGMQNQFELK
         NG     E +
Subjt:  YNGMQNQFELK

A0A6J1C659 S-protein homolog3.0e-1952.43Show/hide
Query:  LFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAAR-DDGFYLYNGMQNQFE
        L  HCKSKDDD        LGE V+     Y W FKENF  T+L+WCNF +   HAS EV+WPE +S WL   C  SNCIW AR D G YL +  Q  FE
Subjt:  LFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAAR-DDGFYLYNGMQNQFE

Query:  LKF
        LK+
Subjt:  LKF

A0A6J5VTZ1 S-protein homolog3.0e-1944.64Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYW--PERRSSWLEDHCTNSNCIWAARDDGFY
        +NQ      L  HCKSKDDD        LG + V     + WSFKENFGGT+L+WCN  N  +HA+F+V+W   E +SSWL   C    C W A+DDG Y
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYW--PERRSSWLEDHCTNSNCIWAARDDGFY

Query:  LYNGMQNQFELK
        + N  +++ EL+
Subjt:  LYNGMQNQFELK

A0A6P4ABD6 S-protein homolog8.0e-2044.95Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY
        +N  ++   LF HC+SKDDD        LGE  +T    + W+F+ NF GT+ +WC      +HA+F+V+WPE+R  WLE  C    CIW A+DDGFYL 
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY

Query:  NGMQNQFEL
        N   NQ EL
Subjt:  NGMQNQFEL

A0A6P4B1H1 S-protein homolog3.0e-1950Show/hide
Query:  LFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQFEL
        LF HCKSKDDD        LGE  +   + + WSFK NF GT+LYWC+     +HA+F VYW      WLED C   +CIW A+DDGFYL N  +N+ EL
Subjt:  LFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQFEL

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.2e-0933.33Show/hide
Query:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN
        N   N   L  HCKSKDDD        LG + +   +S+ +SF   F G +LY+C+F    +  SF++Y  + R S  ++ C +  C+W  R +G   +N
Subjt:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN

Query:  GMQNQFEL
            QF+L
Subjt:  GMQNQFEL

F4JLS0 S-protein homolog 11.9e-1033.02Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY
        +N  T    LF HCKSK+DD        LGE  +     + W+F EN   ++ +WC       H +  V+W +     L   C   NCIW A+ DG YL+
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY

Query:  NGMQNQ
        N    +
Subjt:  NGMQNQ

Q2HQ46 S-protein homolog 741.6e-0933Show/hide
Query:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN
        N  T    LF HCKSK++D        LG+  +     + W+F EN   ++L+WC       H + +V+W +     L   C   NC+W A++DG YL+N
Subjt:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN

Q9FMQ4 S-protein homolog 32.0e-0426.8Show/hide
Query:  HCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQFEL
        HCKS DDD        LG +++    S+ + F+ +  GT+L++C+F    +   F++Y  +R    +  H +  NCIW     G  +++   + F +
Subjt:  HCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQFEL

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family8.8e-1133.33Show/hide
Query:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN
        N   N   L  HCKSKDDD        LG + +   +S+ +SF   F G +LY+C+F    +  SF++Y  + R S  ++ C +  C+W  R +G   +N
Subjt:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN

Query:  GMQNQFEL
            QF+L
Subjt:  GMQNQFEL

AT4G16295.1 S-protein homologue 11.4e-1133.02Show/hide
Query:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY
        +N  T    LF HCKSK+DD        LGE  +     + W+F EN   ++ +WC       H +  V+W +     L   C   NCIW A+ DG YL+
Subjt:  LNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLY

Query:  NGMQNQ
        N    +
Subjt:  NGMQNQ

AT4G29035.1 Plant self-incompatibility protein S1 family1.1e-1033Show/hide
Query:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN
        N  T    LF HCKSK++D        LG+  +     + W+F EN   ++L+WC       H + +V+W +     L   C   NC+W A++DG YL+N
Subjt:  NQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYN

AT5G12060.1 Plant self-incompatibility protein S1 family1.5e-0526.8Show/hide
Query:  HCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQFEL
        HCKS DDD        LG +++    S+ + F+ +  GT+L++C+F    +   F++Y  +R    +  H +  NCIW     G  +++   + F +
Subjt:  HCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWAARDDGFYLYNGMQNQFEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGCAGCGTCGACCAAAGCTATAACGCCATTGACGCCAATGACAGTGACGATTTGAACCAACAAACAAATGATAATCCTCTCTTCACTCATTGCAAGTCCAAAGA
CGATGATTTAGTTCAGGATCCACCACTGATTTTAGGTGAGCAAGTGGTCACCAACGAAAAGAGCTATTGGTGGAGCTTTAAGGAGAATTTTGGTGGAACATCGTTGTATT
GGTGCAACTTTGGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGATCATCATGGCTTGAAGATCATTGCACCAATTCAAACTGTATTTGGGCA
GCTAGAGACGATGGCTTTTACTTGTATAATGGCATGCAAAACCAATTTGAACTCAAATTCATGCGTGGACATAAAGATGTCGGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGCAGCGTCGACCAAAGCTATAACGCCATTGACGCCAATGACAGTGACGATTTGAACCAACAAACAAATGATAATCCTCTCTTCACTCATTGCAAGTCCAAAGA
CGATGATTTAGTTCAGGATCCACCACTGATTTTAGGTGAGCAAGTGGTCACCAACGAAAAGAGCTATTGGTGGAGCTTTAAGGAGAATTTTGGTGGAACATCGTTGTATT
GGTGCAACTTTGGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGATCATCATGGCTTGAAGATCATTGCACCAATTCAAACTGTATTTGGGCA
GCTAGAGACGATGGCTTTTACTTGTATAATGGCATGCAAAACCAATTTGAACTCAAATTCATGCGTGGACATAAAGATGTCGGAAAATAA
Protein sequenceShow/hide protein sequence
MFCSVDQSYNAIDANDSDDLNQQTNDNPLFTHCKSKDDDLVQDPPLILGEQVVTNEKSYWWSFKENFGGTSLYWCNFGNTQKHASFEVYWPERRSSWLEDHCTNSNCIWA
ARDDGFYLYNGMQNQFELKFMRGHKDVGK