; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G01600 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G01600
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr07:1671897..1673389
RNA-Seq ExpressionClc07G01600
SyntenyClc07G01600
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]9.9e-2750.47Show/hide
Query:  VTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFNGSQKQY
        V+I N Q + TLL HCKSK+DDLG +V+++   Y W F+ N + TTLFWCDF +   HA+FEVFWPE   WL   C   NC W A N GF+L N  ++++
Subjt:  VTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFNGSQKQY

Query:  DFVHAWE
        +F+H WE
Subjt:  DFVHAWE

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]4.2e-2543.48Show/hide
Query:  PLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN
        PL+  K+ I+N  T DTL   CKSK+DDLG Q + + + + W F+ N + TTL+WC   N + HA+F VFWPE   WL+  C   NCIW A + G YL  
Subjt:  PLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN

Query:  GSQKQYDFVHAWESG
             ++ +H WE G
Subjt:  GSQKQYDFVHAWESG

XP_008458671.1 PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]3.9e-3155.08Show/hide
Query:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNK
        SK+  PLT  +VTI+N+Q N +L  HCKSK+DDLG  VI N G+ Y W F+ N+  TT FWC+F++   HA+FEVFWPE   WLSD C++SNC+WVA+N 
Subjt:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNK

Query:  GFYLFNGSQKQYDFVHAW
        GF L NG  K  +F H W
Subjt:  GFYLFNGSQKQYDFVHAW

XP_011656368.1 S-protein homolog 1 [Cucumis sativus]1.2e-2752.1Show/hide
Query:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHC-TDSNCIWVANN
        SK+  PLT   VTI+N+Q N +L  HCKSK+DDLG  VI N G+ Y W F+ N+  TT +WCDF++   HA+FEVFWPE   W SD C ++SNC+WVA +
Subjt:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHC-TDSNCIWVANN

Query:  KGFYLFNGSQKQYDFVHAW
         GF L N   K  +F H W
Subjt:  KGFYLFNGSQKQYDFVHAW

XP_038907112.1 S-protein homolog 74-like [Benincasa hispida]1.7e-3156.78Show/hide
Query:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNK
        SK+  PLT  +VTI+N+Q N  L  HCKSK+DDLG  VI N G+ Y W F+ NF  TT FWC+F++   HA+FEVFWPE+  WLSD C DSNC+WVA+NK
Subjt:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNK

Query:  GFYLFNGSQKQYDFVHAW
        GF L N   K  +F H W
Subjt:  GFYLFNGSQKQYDFVHAW

TrEMBL top hitse value%identityAlignment
A0A0A0KA40 S-protein homolog5.7e-2852.1Show/hide
Query:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHC-TDSNCIWVANN
        SK+  PLT   VTI+N+Q N +L  HCKSK+DDLG  VI N G+ Y W F+ N+  TT +WCDF++   HA+FEVFWPE   W SD C ++SNC+WVA +
Subjt:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHC-TDSNCIWVANN

Query:  KGFYLFNGSQKQYDFVHAW
         GF L N   K  +F H W
Subjt:  KGFYLFNGSQKQYDFVHAW

A0A1S3C8Z6 S-protein homolog1.9e-3155.08Show/hide
Query:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNK
        SK+  PLT  +VTI+N+Q N +L  HCKSK+DDLG  VI N G+ Y W F+ N+  TT FWC+F++   HA+FEVFWPE   WLSD C++SNC+WVA+N 
Subjt:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVI-NIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNK

Query:  GFYLFNGSQKQYDFVHAW
        GF L NG  K  +F H W
Subjt:  GFYLFNGSQKQYDFVHAW

A0A6J1C659 S-protein homolog3.2e-2347.83Show/hide
Query:  PLTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVA-NNKGFYL
        P +  +VTI N+ + +  L  HCKSK+DDLGE VI     YEWKF+ NF+ TTLFWC+F++   HA+ EVFWPE   WL+  C  SNCIWVA  ++G YL
Subjt:  PLTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVA-NNKGFYL

Query:  FNGSQKQYDFVHAWE
         +  Q+ ++  + W+
Subjt:  FNGSQKQYDFVHAWE

A0A6J1ESA0 S-protein homolog9.4e-2341.23Show/hide
Query:  PLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEA-WLSDHCTDSNCIWVANNKGFYLF
        P    +V I+N Q+   L  HCKS +DDLG  +I +   Y+WKF+VN + +T FWC F +   H +F+VFWPE ++ WL + C   +CIWVA ++G YL 
Subjt:  PLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEA-WLSDHCTDSNCIWVANNKGFYLF

Query:  NGSQKQYDFVHAWE
        N  +  ++ +H W+
Subjt:  NGSQKQYDFVHAWE

A0A6J1GSD6 S-protein homolog1.2e-2244.07Show/hide
Query:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKG
        S  I   +  +V I+N   + TL+ HCKSK+DDLGE VI  G  Y WKF  N   TTL+WC+F + +  A+ +VFWPE   WLSD C  + CIWVA + G
Subjt:  SKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKG

Query:  FYLFNGSQKQYDFVHAWE
          +  G+   Y+ V+ W+
Subjt:  FYLFNGSQKQYDFVHAWE

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 26.5e-1331.86Show/hide
Query:  PLTPMKVTIMNHQTND-TLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLF
        P +   V I N   N  TLL HCKSK+DDLG + +  G+ + + F   FF  TL++C F    +  +F+++    ++   + C    C+W     G   F
Subjt:  PLTPMKVTIMNHQTND-TLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLF

Query:  NGSQKQYDFVHAW
        N   KQ+D  + W
Subjt:  NGSQKQYDFVHAW

F4JLS0 S-protein homolog 15.3e-1535.65Show/hide
Query:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN
        ++  +VT++N   T +TL  HCKSK DDLGE  +     + W F  N   +T FWC       H    VFW   +  L   C   NCIW A   G YL+N
Subjt:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN

Query:  GSQKQYDFVHAWESG
         +  +      WE G
Subjt:  GSQKQYDFVHAWESG

P0DN92 S-protein homolog 241.4e-1040.43Show/hide
Query:  KVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQ-KHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFY
        +VTI N   ND LL  HCKS++DDLG  ++  G+++ WKF VNF  +TL++C F   Q K   FE++    + +    C  +NC W A   G Y
Subjt:  KVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQ-KHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFY

Q2HQ46 S-protein homolog 741.5e-1434.78Show/hide
Query:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN
        ++  +VT+ N   T +TL  HCKSK +DLG+  +     + W F  N   +TLFWC       H   +VFW   +  L   C   NC+W A N G YL+N
Subjt:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN

Query:  GSQKQYDFVHAWESG
         +  +      W+SG
Subjt:  GSQKQYDFVHAWESG

Q9FI83 S-protein homolog 286.7e-1038.71Show/hide
Query:  KVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFY
        +VTI N+  ND LLA HCKS++DDLG  ++  G+++ WKF VNF  +TL +C F   Q +    + +  +     D    +NC W A   GF+
Subjt:  KVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFY

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family4.6e-1431.86Show/hide
Query:  PLTPMKVTIMNHQTND-TLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLF
        P +   V I N   N  TLL HCKSK+DDLG + +  G+ + + F   FF  TL++C F    +  +F+++    ++   + C    C+W     G   F
Subjt:  PLTPMKVTIMNHQTND-TLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLF

Query:  NGSQKQYDFVHAW
        N   KQ+D  + W
Subjt:  NGSQKQYDFVHAW

AT4G16295.1 S-protein homologue 13.8e-1635.65Show/hide
Query:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN
        ++  +VT++N   T +TL  HCKSK DDLGE  +     + W F  N   +T FWC       H    VFW   +  L   C   NCIW A   G YL+N
Subjt:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN

Query:  GSQKQYDFVHAWESG
         +  +      WE G
Subjt:  GSQKQYDFVHAWESG

AT4G29035.1 Plant self-incompatibility protein S1 family1.1e-1534.78Show/hide
Query:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN
        ++  +VT+ N   T +TL  HCKSK +DLG+  +     + W F  N   +TLFWC       H   +VFW   +  L   C   NC+W A N G YL+N
Subjt:  LTPMKVTIMNH-QTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFN

Query:  GSQKQYDFVHAWESG
         +  +      W+SG
Subjt:  GSQKQYDFVHAWESG

AT5G06020.1 Plant self-incompatibility protein S1 family8.1e-1135.09Show/hide
Query:  PLTPMKVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKH-ATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYL
        PLT  ++T+ N+  ND LL  HCKSK+DDLG  +   G++Y WKF VNF  +TL++C F   Q +   F++   E + +    C   NC W A     Y 
Subjt:  PLTPMKVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKH-ATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYL

Query:  FNGSQKQYDFVHAW
        ++   +   +   W
Subjt:  FNGSQKQYDFVHAW

AT5G06030.1 Plant self-incompatibility protein S1 family4.8e-1138.71Show/hide
Query:  KVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFY
        +VTI N+  ND LLA HCKS++DDLG  ++  G+++ WKF VNF  +TL +C F   Q +    + +  +     D    +NC W A   GF+
Subjt:  KVTIMNHQTNDTLLA-HCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCAAATTCATACGTCCTTTGACACCAATGAAAGTGACAATTATGAATCATCAAACAAATGATACTCTCTTGGCTCATTGCAAGTCCAAAAATGATGATTTAGG
TGAGCAAGTGATCAACATTGGAAAGATATACGAATGGAAATTCAGGGTGAATTTTTTTGCAACAACGTTGTTTTGGTGTGACTTTCGCAACACACAAAAACATGCAACAT
TTGAAGTTTTTTGGCCCGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAACAATAAGGGCTTTTACTTGTTTAATGGCTCTCAA
AAGCAGTATGACTTCGTTCATGCATGGGAATCTGGTACATCAAAGAAGTCGGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCAAATTCATACGTCCTTTGACACCAATGAAAGTGACAATTATGAATCATCAAACAAATGATACTCTCTTGGCTCATTGCAAGTCCAAAAATGATGATTTAGG
TGAGCAAGTGATCAACATTGGAAAGATATACGAATGGAAATTCAGGGTGAATTTTTTTGCAACAACGTTGTTTTGGTGTGACTTTCGCAACACACAAAAACATGCAACAT
TTGAAGTTTTTTGGCCCGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATATGGGTAGCTAACAATAAGGGCTTTTACTTGTTTAATGGCTCTCAA
AAGCAGTATGACTTCGTTCATGCATGGGAATCTGGTACATCAAAGAAGTCGGGAAAATGA
Protein sequenceShow/hide protein sequence
MASKFIRPLTPMKVTIMNHQTNDTLLAHCKSKNDDLGEQVINIGKIYEWKFRVNFFATTLFWCDFRNTQKHATFEVFWPEAEAWLSDHCTDSNCIWVANNKGFYLFNGSQ
KQYDFVHAWESGTSKKSGK