; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G01630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G01630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr07:1720996..1722649
RNA-Seq ExpressionClc07G01630
SyntenyClc07G01630
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650840.1 hypothetical protein Csa_017632 [Cucumis sativus]3.8e-2956.56Show/hide
Query:  MVMNNLKYSMALF-WVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALE
        M++ NLK+   L   VI +LL ++QTS  AP +HW VQ+ N+MQ  Q+L LHCKSKD+D G+Q L   Q+FSWKFRENLWQ TLYWCYM   + NH++LE
Subjt:  MVMNNLKYSMALF-WVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALE

Query:  VFWPESESKSWLSHRCEGEGCF
        VFWPE+ SK +LS+RC    C+
Subjt:  VFWPESESKSWLSHRCEGEGCF

KAE8651384.1 hypothetical protein Csa_001671 [Cucumis sativus]3.8e-2150Show/hide
Query:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV
        M  LKY +A+  VI+AL+     Q     P   W V I N+M +K +LF+ CKSKD+DLG QNLG +Q FSW F+ENLWQTTLYWCYMH   ++H +  V
Subjt:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV

Query:  FWPESESKSWLSHRCEGEGC
        +WP  E   WL+ RC+   C
Subjt:  FWPESESKSWLSHRCEGEGC

KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]9.1e-2352.5Show/hide
Query:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV
        M  LKY +A+  VI+AL+     Q     P   W + I N+M +K TLFL CKSKD+DLG QNLG +Q FSW F+ENLWQTTLYWCYMH  E +H +  V
Subjt:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV

Query:  FWPESESKSWLSHRCEGEGC
        FWP  E   WL+ RC+   C
Subjt:  FWPESESKSWLSHRCEGEGC

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]9.1e-2352.5Show/hide
Query:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV
        M  LKY +A+  VI+AL+     Q     P   W + I N+M +K TLFL CKSKD+DLG QNLG +Q FSW F+ENLWQTTLYWCYMH  E +H +  V
Subjt:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV

Query:  FWPESESKSWLSHRCEGEGC
        FWP  E   WL+ RC+   C
Subjt:  FWPESESKSWLSHRCEGEGC

XP_004136435.1 S-protein homolog 1-like [Cucumis sativus]3.8e-2150Show/hide
Query:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV
        M  LKY +A+  VI+AL+     Q     P   W V I N+M +K +LF+ CKSKD+DLG QNLG +Q FSW F+ENLWQTTLYWCYMH   ++H +  V
Subjt:  MNNLKYSMALFWVIMALLAMV--QTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV

Query:  FWPESESKSWLSHRCEGEGC
        +WP  E   WL+ RC+   C
Subjt:  FWPESESKSWLSHRCEGEGC

TrEMBL top hitse value%identityAlignment
A0A251N118 S-protein homolog2.5e-1844.64Show/hide
Query:  LFWVIMALLAMVQTSFAAP---FQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESK
        +F+V +A+LA+      +P   +  W V + N++ + +TLF HCKSKD+DLG++NL     F+W F+EN + TTLYWCYM   +Q H AL+VFW E +  
Subjt:  LFWVIMALLAMVQTSFAAP---FQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESK

Query:  SWLSHRCEGEGC
        SWL +RC  + C
Subjt:  SWLSHRCEGEGC

A0A5E4EJG4 S-protein homolog2.5e-1844.25Show/hide
Query:  LFWVIMALLAMVQTSFAAP----FQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESES
        +F+V +A+LA+      +P    +  W V + N++ + +TLF HCKSKD+DLG++NL     F+W F+EN + TTLYWCYM   +Q H AL+VFW E + 
Subjt:  LFWVIMALLAMVQTSFAAP----FQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESES

Query:  KSWLSHRCEGEGC
         SWL +RC  + C
Subjt:  KSWLSHRCEGEGC

A0A6J1CPR8 S-protein homolog3.3e-1839.45Show/hide
Query:  LFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWL
        L ++ ++ LA+V+   A P   W + + N++ + Q LF+HCKSK++DLG+ NL     F+W+FR N+W TTLYWCY+ K     ++ + FW E +S  WL
Subjt:  LFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWL

Query:  SHRCEGEGC
         ++C    C
Subjt:  SHRCEGEGC

A0A6J1CQW3 S-protein homolog1.9e-1843.24Show/hide
Query:  IMALLAMVQTSFAAPFQH------WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKS
        ++ L+AMV    +    H      W V I N + S QTLF+HCKSKD+DLG  NL     F W FR+NLW TTL+WCYM K +  + + EV+W +   + 
Subjt:  IMALLAMVQTSFAAPFQH------WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKS

Query:  WLSHRCEGEGC
        WL + C  E C
Subjt:  WLSHRCEGEGC

A0A6J1CRU0 S-protein homolog1.1e-1839.17Show/hide
Query:  MVMNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV
        M + + K    +F ++++L+ +      +  + W + + N + + QTLF+HCKSKDNDLG+ NL     F+W FR NLW TTL+WCY+HK +    + +V
Subjt:  MVMNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEV

Query:  FWPESESKSWLSHRCEGEGC
        FW E +S  WL +RC    C
Subjt:  FWPESESKSWLSHRCEGEGC

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 29.5e-0731.25Show/hide
Query:  TSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC
        T+   P    TV+I+ND+ ++ TL  HCKSKD+DLG + L   +++S+ F    +  TLY+C      ++H + +++    +S     ++CE + C
Subjt:  TSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC

F4JLS0 S-protein homolog 11.9e-1543.68Show/hide
Query:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC
        W V + N + + +TLF+HCKSK++DLG+ NL F   FSW F EN+  +T +WCYM+ K+  H+ + VFW +      L HRC  + C
Subjt:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC

P0DN93 S-protein homolog 291.4e-0537.35Show/hide
Query:  LKYSMALFWVIMALLAMVQTSFAA--PFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWC
        +K S  +F V+  +L  V +S     PF    V ++N++  + TL + C+SKD+DLG+  L   Q F WKFR + ++TTL+ C
Subjt:  LKYSMALFWVIMALLAMVQTSFAA--PFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWC

Q2HQ46 S-protein homolog 741.0e-1645.98Show/hide
Query:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC
        W V ++N + + +TLF+HCKSK+NDLG  NL F   FSW F EN+  +TL+WCYM  K+  H+ ++VFW +      L HRC+ + C
Subjt:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC

Q9LW22 S-protein homolog 212.8e-0632.95Show/hide
Query:  TVQISNDM--QSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHK----KEQNHI----ALEVFWPESESKSWLS
        T+ + N++  ++K  L +HCKSK+ND+G + L   +  S+ F+ N W TT +WC ++K    K    I    A+ +F  +  S +WL+
Subjt:  TVQISNDM--QSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHK----KEQNHI----ALEVFWPESESKSWLS

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family2.0e-0732.95Show/hide
Query:  TVQISNDM--QSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHK----KEQNHI----ALEVFWPESESKSWLS
        T+ + N++  ++K  L +HCKSK+ND+G + L   +  S+ F+ N W TT +WC ++K    K    I    A+ +F  +  S +WL+
Subjt:  TVQISNDM--QSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHK----KEQNHI----ALEVFWPESESKSWLS

AT4G16195.1 Plant self-incompatibility protein S1 family6.7e-0831.25Show/hide
Query:  TSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC
        T+   P    TV+I+ND+ ++ TL  HCKSKD+DLG + L   +++S+ F    +  TLY+C      ++H + +++    +S     ++CE + C
Subjt:  TSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC

AT4G16295.1 S-protein homologue 11.3e-1643.68Show/hide
Query:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC
        W V + N + + +TLF+HCKSK++DLG+ NL F   FSW F EN+  +T +WCYM+ K+  H+ + VFW +      L HRC  + C
Subjt:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC

AT4G29035.1 Plant self-incompatibility protein S1 family7.2e-1845.98Show/hide
Query:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC
        W V ++N + + +TLF+HCKSK+NDLG  NL F   FSW F EN+  +TL+WCYM  K+  H+ ++VFW +      L HRC+ + C
Subjt:  WTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGC

AT5G04350.1 Plant self-incompatibility protein S1 family7.4e-0731.48Show/hide
Query:  MNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYM-----HKKEQNHIA
        MNNL     +F +++ L   V  +F        V +SN ++  + L +HC+SKD+DLG+  L   Q + + F +N+WQTT + C M      K   + +A
Subjt:  MNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYM-----HKKEQNHIA

Query:  LEVFWPES
         E  W ++
Subjt:  LEVFWPES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGAATAACCTCAAATATTCCATGGCTTTATTTTGGGTTATCATGGCATTATTAGCCATGGTTCAAACAAGCTTTGCGGCTCCATTTCAGCATTGGACTGTGCA
AATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAAT
TCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGG
CTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGTCAAAAAGAAAAAGAAAAGAAAATAATTCTCTCTCTCTGCCGCATCTCTCGCTCTCCCCCTTCCTTCCTTTCGCC
GTCGCCGCCGCCGCCTCTCCCAACCTCCCGCTGCTCCGTCATCTCTCTCTCTCTCTCGCTCTCCATCAGTTTCCGGGAGTTCCCGGATGTTTCACTCGTCGGGTGTCGCG
GGTTTCGCCTTGAGTGTCGTTGTCGGCATTCAACTCTCGCTAGCTGTCTCGCTCTCCCGCTCTCACTTTCTTCCCTCGCTTCACGGTCTCCCGCGCCTAAAGAGCACTGT
CGCTCTCGTGGTATCGCTCTCCCGCTAGCTCTCGCGCTCTCGCTCTCTCGCTCGACCCACGCTTTCCTTGCGCCCAGTGTCGCCGCAGCCTCGGGCTCTCGCTCTCTCGC
CGGTTTCGCTGTCTCGGCTCTCGCGCTCTCGCTCAAGTCTCGCTTCTCGCTCGGGAGTCATTCTCTCTCGGATTTTTGGCTCTCGGCAACGGTTCCTTTCTTGTCCGGCC
AGAACAGTACCTTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATGAATAACCTCAAATATTCCATGGCTTTATTTTGGGTTATCATGGCATTATTAGCCATGGTTCAAACAAGCTTTGCGGCTCCATTTCAGCATTGGACTGTGCA
AATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAAT
TCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGG
CTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGTCAAAAAGAAAAAGAAAAGAAAATAATTCTCTCTCTCTGCCGCATCTCTCGCTCTCCCCCTTCCTTCCTTTCGCC
GTCGCCGCCGCCGCCTCTCCCAACCTCCCGCTGCTCCGTCATCTCTCTCTCTCTCTCGCTCTCCATCAGTTTCCGGGAGTTCCCGGATGTTTCACTCGTCGGGTGTCGCG
GGTTTCGCCTTGAGTGTCGTTGTCGGCATTCAACTCTCGCTAGCTGTCTCGCTCTCCCGCTCTCACTTTCTTCCCTCGCTTCACGGTCTCCCGCGCCTAAAGAGCACTGT
CGCTCTCGTGGTATCGCTCTCCCGCTAGCTCTCGCGCTCTCGCTCTCTCGCTCGACCCACGCTTTCCTTGCGCCCAGTGTCGCCGCAGCCTCGGGCTCTCGCTCTCTCGC
CGGTTTCGCTGTCTCGGCTCTCGCGCTCTCGCTCAAGTCTCGCTTCTCGCTCGGGAGTCATTCTCTCTCGGATTTTTGGCTCTCGGCAACGGTTCCTTTCTTGTCCGGCC
AGAACAGTACCTTTAAGTGA
Protein sequenceShow/hide protein sequence
MVMNNLKYSMALFWVIMALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSW
LSHRCEGEGCFCQKEKEKKIILSLCRISRSPPSFLSPSPPPPLPTSRCSVISLSLSLSISFREFPDVSLVGCRGFRLECRCRHSTLASCLALPLSLSSLASRSPAPKEHC
RSRGIALPLALALSLSRSTHAFLAPSVAAASGSRSLAGFAVSALALSLKSRFSLGSHSLSDFWLSATVPFLSGQNSTFK