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Clc07G01650 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G01650
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionStress response protein nst1
Genome locationClcChr07:1736019..1739101
RNA-Seq ExpressionClc07G01650
SyntenyClc07G01650
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650841.1 hypothetical protein Csa_017605, partial [Cucumis sativus]1.1e-1185.45Show/hide
Query:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLS
        M ET V GMGSVL+MLVVVGLVL LPLVIGSLQPPSG LLLLFP TLAAVFF LS
Subjt:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLS

KAG7011309.1 hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-1382.14Show/hide
Query:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR
        MGE SV GMGSVL+MLVVVG +LFLPLVIGS+QPPSGL+LL+FP TLAAVFF LSR
Subjt:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR

XP_008447644.1 PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo]4.4e-1387.5Show/hide
Query:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR
        M ETSV GMGSVL+MLVVVGLVLFLPL+IGSLQPPSG LLLLFP TLAAVFF LSR
Subjt:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR

XP_011652820.1 uncharacterized protein LOC105435116 [Cucumis sativus]2.9e-1285.71Show/hide
Query:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR
        M ET V GMGSVL+MLVVVGLVL LPLVIGSLQPPSG LLLLFP TLAAVFF LSR
Subjt:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR

XP_038888108.1 uncharacterized protein LOC120078008 [Benincasa hispida]2.3e-1491.07Show/hide
Query:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR
        M +TSV GMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLL+FP TLAAVFFFLSR
Subjt:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR

TrEMBL top hitse value%identityAlignment
A0A1S3BHY2 uncharacterized protein LOC1034900512.1e-1387.5Show/hide
Query:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR
        M ETSV GMGSVL+MLVVVGLVLFLPL+IGSLQPPSG LLLLFP TLAAVFF LSR
Subjt:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR

A0A5A7T8Q7 Stress response protein nst12.1e-1387.5Show/hide
Query:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR
        M ETSV GMGSVL+MLVVVGLVLFLPL+IGSLQPPSG LLLLFP TLAAVFF LSR
Subjt:  MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAACTAGTGTGGTTGGAATGGGGAGTGTTTTGATGATGCTTGTGGTGGTTGGACTTGTTTTGTTTCTGCCGCTGGTGATCGGTTCCCTTCAGCCGCCGTCCGG
CCTCCTGCTGCTCCTTTTTCCGGCCACTCTCGCCGCTGTGTTCTTCTTCCTCTCACGATGGTGCAAGAGTGGCAGGCGGAATTGGACGACAAACACCGACTTAGACAGTG
CTCAACTCGACTGGACAGCGGACGATGAGCGACTTGACTTGACAGCGAATGGCAGCGCGACGACTTGGATGATGGTGGACACACGACGGATGGTCGAACGACGACAAATG
GGCATGGACGACGACAGCAATGGGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAACTAGTGTGGTTGGAATGGGGAGTGTTTTGATGATGCTTGTGGTGGTTGGACTTGTTTTGTTTCTGCCGCTGGTGATCGGTTCCCTTCAGCCGCCGTCCGG
CCTCCTGCTGCTCCTTTTTCCGGCCACTCTCGCCGCTGTGTTCTTCTTCCTCTCACGATGGTGCAAGAGTGGCAGGCGGAATTGGACGACAAACACCGACTTAGACAGTG
CTCAACTCGACTGGACAGCGGACGATGAGCGACTTGACTTGACAGCGAATGGCAGCGCGACGACTTGGATGATGGTGGACACACGACGGATGGTCGAACGACGACAAATG
GGCATGGACGACGACAGCAATGGGTTCTAG
Protein sequenceShow/hide protein sequence
MGETSVVGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLLFPATLAAVFFFLSRWCKSGRRNWTTNTDLDSAQLDWTADDERLDLTANGSATTWMMVDTRRMVERRQM
GMDDDSNGF