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Clc07G01660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G01660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich protein 5-like
Genome locationClcChr07:1738952..1741004
RNA-Seq ExpressionClc07G01660
SyntenyClc07G01660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571569.1 putative pectate lyase 15, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1466.67Show/hide
Query:  MANYKLNLMLV--MAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV
        MAN KLNLML+  MA+AAF +HV ART P EAAKGLNDQKNFL     GG  GIGD GLPF        GGLGGGGGLGG+GGG+GG+GG+GIGGIG GV
Subjt:  MANYKLNLMLV--MAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV

Query:  GGGVIGGIGGG
             GG+GGG
Subjt:  GGGVIGGIGGG

XP_008447334.1 PREDICTED: acanthoscurrin-2-like [Cucumis melo]3.1e-3087.04Show/hide
Query:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG
        MANYKLNLMLVMA+AA  +HV ART PNEAAKGLNDQKNFLNYGGVGG  GIGDGGLPF  GGG GGGGLGGGGGLGGLGGG+GG+GG+GIGGIGGGVGG
Subjt:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG

Query:  GVIGGIGG
        GVIGGIGG
Subjt:  GVIGGIGG

XP_011652144.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]4.2e-2785.59Show/hide
Query:  MANYKLNLMLV--MAIAAFVVHVGARTTPN-EAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGG
        MANYKLNLMLV  MA+AAF  HV ART PN +AAKGLNDQKNFLNYGGVGG  GIGD GLPF  GGGIGGGGLGGGGGLGGLGGGIGG+GG+GIGGIGGG
Subjt:  MANYKLNLMLV--MAIAAFVVHVGARTTPN-EAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGG

Query:  VGGGVIGGIGG
        VGGGVIGGIGG
Subjt:  VGGGVIGGIGG

XP_023511522.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]1.1e-1467.57Show/hide
Query:  MANYKLNLMLV--MAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV
        MAN KLNLML+  MA+AAF +HV ART P EAAKGLNDQKNFL+    GG  GIGD GLPF        GGLGGGGGLGGLGGG+GG+GG+GIGGIG GV
Subjt:  MANYKLNLMLV--MAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV

Query:  GGGVIGGIGGG
             GG+GGG
Subjt:  GGGVIGGIGGG

XP_038887967.1 acanthoscurrin-1-like [Benincasa hispida]1.3e-3390.83Show/hide
Query:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG
        MANYKLNLMLVMA+AAF VHV ART PNEA KGLNDQKNFLNYGG+GGIGGIGD GLPFGGGGGIGGGGLGGGGGLGGLGGGIGG GG+GIGGIGGG+GG
Subjt:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG

Query:  GVIGGIGGG
        GVIGGIGGG
Subjt:  GVIGGIGGG

TrEMBL top hitse value%identityAlignment
A0A0A0LEM4 Uncharacterized protein2.0e-2785.59Show/hide
Query:  MANYKLNLMLV--MAIAAFVVHVGARTTPN-EAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGG
        MANYKLNLMLV  MA+AAF  HV ART PN +AAKGLNDQKNFLNYGGVGG  GIGD GLPF  GGGIGGGGLGGGGGLGGLGGGIGG+GG+GIGGIGGG
Subjt:  MANYKLNLMLV--MAIAAFVVHVGARTTPN-EAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGG

Query:  VGGGVIGGIGG
        VGGGVIGGIGG
Subjt:  VGGGVIGGIGG

A0A1S3BI24 acanthoscurrin-2-like1.5e-3087.04Show/hide
Query:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG
        MANYKLNLMLVMA+AA  +HV ART PNEAAKGLNDQKNFLNYGGVGG  GIGDGGLPF  GGG GGGGLGGGGGLGGLGGG+GG+GG+GIGGIGGGVGG
Subjt:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG

Query:  GVIGGIGG
        GVIGGIGG
Subjt:  GVIGGIGG

A0A5A7UCJ9 Acanthoscurrin-2-like1.5e-3087.04Show/hide
Query:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG
        MANYKLNLMLVMA+AA  +HV ART PNEAAKGLNDQKNFLNYGGVGG  GIGDGGLPF  GGG GGGGLGGGGGLGGLGGG+GG+GG+GIGGIGGGVGG
Subjt:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGG

Query:  GVIGGIGG
        GVIGGIGG
Subjt:  GVIGGIGG

A0A6J1DV95 acanthoscurrin-1-like1.1e-1266.67Show/hide
Query:  LMLVMAIAAFVVHVGARTTPNE----AAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGG-----GGLGGG-GGLGGLGGGIGGYGGIGIGGIGGG
        LMLV+A+AAF V   AR  P +    A +GL DQKN LNYGG+GG  GIGD GLP GG GG+ G     GGLGGG GGLGGLGGGIGGYGG GIGGIG G
Subjt:  LMLVMAIAAFVVHVGARTTPNE----AAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGG-----GGLGGG-GGLGGLGGGIGGYGGIGIGGIGGG

Query:  VGGGVIGGIGG
        +GGG +GGIGG
Subjt:  VGGGVIGGIGG

A0A6J1HG59 glycine-rich protein 5-like1.1e-1466.67Show/hide
Query:  MANYKLNLMLV--MAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV
        MAN KLNLML+  MA+AAF +HV ART P EAAKGLNDQKNFL     GG  GIGD GLPF        GGLGGGGGLGG+GGG+GG+GG+GIGGIG GV
Subjt:  MANYKLNLMLV--MAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV

Query:  GGGVIGGIGGG
             GG+GGG
Subjt:  GGGVIGGIGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29030.1 Putative membrane lipoprotein1.1e-0450.88Show/hide
Query:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGG-GGGIGG-GGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV
        MA +   + LV A+A+  +  GAR  P     GL+DQKN+L YG  GG  G+GD GLPFGG GGG+ G GG  G GG GG GGG+G       GG+GGG 
Subjt:  MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGG-GGGIGG-GGLGGGGGLGGLGGGIGGYGGIGIGGIGGGV

Query:  GGGVIGGIGGGEPI
        G G+ GG+GGG  I
Subjt:  GGGVIGGIGGGEPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATTATAAGCTTAATTTGATGTTGGTTATGGCTATTGCTGCATTTGTAGTTCATGTTGGTGCAAGAACTACCCCAAATGAGGCTGCAAAAGGCCTCAATGACCA
AAAGAACTTCCTCAACTATGGTGGGGTTGGTGGCATTGGTGGAATTGGTGATGGTGGACTCCCCTTCGGAGGCGGTGGCGGTATCGGCGGAGGAGGACTCGGAGGAGGCG
GTGGCTTAGGCGGGCTTGGCGGTGGCATTGGTGGATACGGTGGGATTGGCATTGGTGGCATTGGTGGTGGAGTTGGCGGTGGAGTGATCGGCGGGATTGGTGGTGGTGAA
CCCATTGCTGTCGTCGTCCATGCCCATTTGTCGTCGTTCGACCATCCGTCGTGTGTCCACCATCATCCAAGTCGTCGCGCTGCCATTCGCTGTCAAGTCAAGTCGCTCAT
CGTCCGCTGTCCAGTCGAGTTGAGCACTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATTATAAGCTTAATTTGATGTTGGTTATGGCTATTGCTGCATTTGTAGTTCATGTTGGTGCAAGAACTACCCCAAATGAGGCTGCAAAAGGCCTCAATGACCA
AAAGAACTTCCTCAACTATGGTGGGGTTGGTGGCATTGGTGGAATTGGTGATGGTGGACTCCCCTTCGGAGGCGGTGGCGGTATCGGCGGAGGAGGACTCGGAGGAGGCG
GTGGCTTAGGCGGGCTTGGCGGTGGCATTGGTGGATACGGTGGGATTGGCATTGGTGGCATTGGTGGTGGAGTTGGCGGTGGAGTGATCGGCGGGATTGGTGGTGGTGAA
CCCATTGCTGTCGTCGTCCATGCCCATTTGTCGTCGTTCGACCATCCGTCGTGTGTCCACCATCATCCAAGTCGTCGCGCTGCCATTCGCTGTCAAGTCAAGTCGCTCAT
CGTCCGCTGTCCAGTCGAGTTGAGCACTGTCTAA
Protein sequenceShow/hide protein sequence
MANYKLNLMLVMAIAAFVVHVGARTTPNEAAKGLNDQKNFLNYGGVGGIGGIGDGGLPFGGGGGIGGGGLGGGGGLGGLGGGIGGYGGIGIGGIGGGVGGGVIGGIGGGE
PIAVVVHAHLSSFDHPSCVHHHPSRRAAIRCQVKSLIVRCPVELSTV