CuGenDBv2

Gene ID	Clc07G01930
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	cytochrome c oxidase subunit 3
Genome location	ClcChr07:1986331..1988166
RNA-Seq Expression	Clc07G01930
Synteny	Clc07G01930
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AHF22721.1 cytochrome c oxidase subunit 3, partial [Fragaria mandshurica]

6.7e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

AMW92636.1 cytochrome c oxidase subunit 3, partial [Langsdorffia malagasica]

5.2e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

AMW92638.1 cytochrome c oxidase subunit 3, partial [Thonningia sanguinea]

5.2e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

KAG6604293.1 Cytochrome c oxidase subunit 3, partial [Cucurbita argyrosperma subsp. sororia]

5.2e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

KEH16856.1 cytochrome C oxidase subunit 3 [Medicago truncatula]

6.7e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

TrEMBL top hits

e value

%identity

Alignment

A0A142I0Z0 Cytochrome c oxidase subunit 3

3.3e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

A0A1U8ZPV6 Cytochrome c oxidase subunit 3 (Fragment)

2.5e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

A0A1U8ZPW0 Cytochrome c oxidase subunit 3 (Fragment)

2.5e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

A0A1U8ZQH1 Cytochrome c oxidase subunit 3 (Fragment)

2.5e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

E9KZN7 Cytochrome c oxidase subunit 3

3.3e-14

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

SwissProt top hits

e value

%identity

Alignment

P08745 Cytochrome c oxidase subunit 3

2.2e-15

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS A+VFTGFQGMEYYQAP TISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

P14853 Cytochrome c oxidase subunit 3

8.8e-17

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

P15953 Cytochrome c oxidase subunit 3

4.4e-16

Show/hide

Query:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATV  ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF

P92514 Cytochrome c oxidase subunit 3

4.4e-16

Show/hide

Query:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATV  ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF

Q03227 Cytochrome c oxidase subunit 3

8.8e-17

Show/hide

Query:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATVS ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATVS-ALVFTGFQGMEYYQAPFTISDSIYGSSF

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

3.1e-17

Show/hide

Query:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATV  ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF

ATMG00730.1 cytochrome c oxidase subunit 3

3.1e-17

Show/hide

Query:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF
        +HAI+AGKE+RAVYALVATV  ALVFTGFQGMEYYQAPFTISDSIYGS+F
Subjt:  YHAIIAGKEERAVYALVATV-SALVFTGFQGMEYYQAPFTISDSIYGSSF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCAAATGGAATTGAAACTGAATGCAGGAATGGCTTCTGTAAGAACTTGGATCTTAGCAGGAAGAAGAAGAACAAATTCAGGAATGGCTTCTGCAAGAACTTTGAAGC
TTGGCAGGAAGAAGAAGAAGAAATTCAGGAAGGGCTTCTGCAAGAACTTTGGGGCTTGGAAGGAGGAAGAAGAAGAAGATATTCAGTCAATTTTTTTCGTGGTCATTGTC
ATGTAAGTAAGTCGTGGACCGGGTCCACGAGTGTTGACCAAACTCGTGGACCGGGTCCACGATTTCGGCCGAACTCGTGGACCCGGTCCACGTTTTCGCCCGACCAAACT
CGTGGACCGGGTCCACGATTTATGCCAAATAACTGTCATAATCACACCAATTATCATGCTATAATCGCGGGGAAGGAGGAACGAGCAGTTTACGCTTTAGTAGCTACCGT
TTCAGCTCTAGTATTCACAGGTTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCAGATAGTATTTATGGTTCGAGTTTTGATCAAAAAGACTTCTTACCCC
CGTTCTTTTCTCATGATACGTCCAAAAACGTCCGGTTTTTTTCCCATGATAAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSNGIETECRNGFCKNLDLSRKKKNKFRNGFCKNFEAWQEEEEEIQEGLLQELWGLEGGRRRRYSVNFFRGHCHVSKSWTGSTSVDQTRGPGPRFRPNSWTRSTFSPDQT
RGPGPRFMPNNCHNHTNYHAIIAGKEERAVYALVATVSALVFTGFQGMEYYQAPFTISDSIYGSSFDQKDFLPPFFSHDTSKNVRFFSHDK

Clc07G01930 (gene) of Watermelon (cordophanus) v2 genome