; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G02040 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G02040
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPoly(A)-specific ribonuclease
Genome locationClcChr07:2043968..2045023
RNA-Seq ExpressionClc07G02040
SyntenyClc07G02040
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.5e-11173.53Show/hide
Query:  APISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISDM
        A I    WKREVWS N  EEIEL+K YL +FPIVAIDTEFPGFLR+TPKGV++EEFY CLQFNVNRLSILQLGLTL D+ G IGMTWEFNF+DFDQIS+M
Subjt:  APISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISDM

Query:  EGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLLD
        EGV SLDSFLKNKGF+F KLRS GIAPQEF R FKP++RSG IQ+WITFHG YDIAYLMK   I  MP SM+ FA+ A  L GTVTDLKHMARY + L +
Subjt:  EGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLLD

Query:  GNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
        GNLGLKKLAKLL +NR+GTAHF GSDSLLTASVYAKMK + K+   + EGFLYGLP+PI+  R P+ I DPS
Subjt:  GNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]2.5e-11173.72Show/hide
Query:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS
        GE  I    WKR+VWS N  EEIEL+KQ L +FPIVAIDTEFPGFLR+TPKGV++EEFY+CLQFNVNRLSILQLGLTL ++ G IGMTWEFNFRDFD+IS
Subjt:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL
        +MEGV SLDSFLKNKGF+F  LRS+GIAP+EFG  F PILRSG I RWITFHG YDIAYLMK   IR MP SM+ FAITA  + GTVTDLKHMA Y   L
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL

Query:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
        LDGNLGLKKLAKLL VNR GTAHF GSDSLLTASVYAKMK + K+  ++ EGFLYGLP+PI+  R+P+ I DPS
Subjt:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

XP_022963785.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.2e-11072.26Show/hide
Query:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS
        GE       W+R+VWS N  EEIEL++Q L +FPIVA+DTEFPGFLR+TPKGV++EEFY+CLQFNVNRLSILQLGLTL ++ G IGMTWEFNF+DFD+IS
Subjt:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL
        +MEGV SLDSFLKNKGF+F  LRS+GIAP+EFGR F PILRSG I RWITFHG YDIAYLMKL  I  MP SM+ FAITA  L GTVTDLKHMAR  N L
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL

Query:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
         +GNLGLKKLAKLL VNR GTAHF GSDSLLTASVYAKMK + K+ + + EGFLYGLP+PI+  R+P+ I DPS
Subjt:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

XP_023511526.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]8.5e-11273.63Show/hide
Query:  EAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISD
        E  I    WKR+VWS N  EEIEL+KQ L +FPIVAIDTEFPGFLR+TPKGV++EEFY+CLQFNVNRLSILQLGLTL ++ G IGMTWEFNF+DFD+IS+
Subjt:  EAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISD

Query:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLL
        MEGV SLDSFLKNKGF+F  LRS+GIAPQEFG+ F PILRSG IQRWITFHG YDIAYLMK   IR MP SM+ FAI+A  + GTVTDLKHMARY N LL
Subjt:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLL

Query:  DGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
        +GNLGLK+LAKLL VNR GTAHF GSDSLLTA+VYAKMK + K+     EGFLYGLP+PI+  R+PI I DPS
Subjt:  DGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

XP_023511528.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.2e-11171.9Show/hide
Query:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS
        GE  +    WKR+VWS N  EEIEL+KQ L +FPIVAIDTEFPGFLR+TPKGV++EEFY+CLQFNVNRLSILQLGLTL ++ G IGMTWEFNF+DFD+IS
Subjt:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL
        +MEGV SLDSFLKNKGF+F  LRS+GIAPQEFG+ F  ILRSG IQRWITFHG YDIAYLMK   +R MP SM+ FAI+A  + GTVTDLKHMARY N L
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL

Query:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
        L+GNLGLK+LAKLL VNR GTAHF GSDSLLTA++YAKMK + K+   + EGFLYGLP+PI+  R+P+ I DPS
Subjt:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

TrEMBL top hitse value%identityAlignment
A0A6J1DLA5 Poly(A)-specific ribonuclease1.9e-10962.69Show/hide
Query:  GEAPISP--THWKREVWSENFREEIELLKQYLPKFPIVAIDTEF-----------------------------PGFLRYTPKGVTEEEFYDCLQFNVNRL
        G++P +P   H  REVWS N  +E+E+L +YLP+FPIVAIDTEF                             PGFLRYTPKGV+EEEFYDCL+FNVNRL
Subjt:  GEAPISP--THWKREVWSENFREEIELLKQYLPKFPIVAIDTEF-----------------------------PGFLRYTPKGVTEEEFYDCLQFNVNRL

Query:  SILQLGLTLCDEKGNIGMTWEFNFRDFDQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFM
        +ILQLGLTL ++ GN+ MTWEFNFRDFD ISDMEGVSSLDSFLKNKGFDF KL+  GIA ++F  LF PI RSG I+RWITFHG YDIAYL+KL++I+++
Subjt:  SILQLGLTLCDEKGNIGMTWEFNFRDFDQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFM

Query:  PASMAAFAITAQRLFGTVTDLKHMARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPIT
        P SMA FA TAQ L GTV+DLKHM RYC+GLLDG+LGLKKLAKLLDV RIG AHF GSDSLLTA+VY KMK MFK+P    EGFLYGLPH I+A +  + 
Subjt:  PASMAAFAITAQRLFGTVTDLKHMARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPIT

Query:  IGDPS----PPSRCLVSSFSQSPLVFV
        I DPS    PP R     F   P  F+
Subjt:  IGDPS----PPSRCLVSSFSQSPLVFV

A0A6J1ESM7 Poly(A)-specific ribonuclease7.1e-11273.53Show/hide
Query:  APISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISDM
        A I    WKREVWS N  EEIEL+K YL +FPIVAIDTEFPGFLR+TPKGV++EEFY CLQFNVNRLSILQLGLTL D+ G IGMTWEFNF+DFDQIS+M
Subjt:  APISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISDM

Query:  EGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLLD
        EGV SLDSFLKNKGF+F KLRS GIAPQEF R FKP++RSG IQ+WITFHG YDIAYLMK   I  MP SM+ FA+ A  L GTVTDLKHMARY + L +
Subjt:  EGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLLD

Query:  GNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
        GNLGLKKLAKLL +NR+GTAHF GSDSLLTASVYAKMK + K+   + EGFLYGLP+PI+  R P+ I DPS
Subjt:  GNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

A0A6J1HIZ7 Poly(A)-specific ribonuclease6.0e-11172.26Show/hide
Query:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS
        GE       W+R+VWS N  EEIEL++Q L +FPIVA+DTEFPGFLR+TPKGV++EEFY+CLQFNVNRLSILQLGLTL ++ G IGMTWEFNF+DFD+IS
Subjt:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL
        +MEGV SLDSFLKNKGF+F  LRS+GIAP+EFGR F PILRSG I RWITFHG YDIAYLMKL  I  MP SM+ FAITA  L GTVTDLKHMAR  N L
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL

Query:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
         +GNLGLKKLAKLL VNR GTAHF GSDSLLTASVYAKMK + K+ + + EGFLYGLP+PI+  R+P+ I DPS
Subjt:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

A0A6J1HL76 Poly(A)-specific ribonuclease1.2e-11173.72Show/hide
Query:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS
        GE  I    WKR+VWS N  EEIEL+KQ L +FPIVAIDTEFPGFLR+TPKGV++EEFY+CLQFNVNRLSILQLGLTL ++ G IGMTWEFNFRDFD+IS
Subjt:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL
        +MEGV SLDSFLKNKGF+F  LRS+GIAP+EFG  F PILRSG I RWITFHG YDIAYLMK   IR MP SM+ FAITA  + GTVTDLKHMA Y   L
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL

Query:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS
        LDGNLGLKKLAKLL VNR GTAHF GSDSLLTASVYAKMK + K+  ++ EGFLYGLP+PI+  R+P+ I DPS
Subjt:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPS

A0A6J1HSR3 Poly(A)-specific ribonuclease4.3e-10972.89Show/hide
Query:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS
        GEA I    WKR+VWS N  EEIEL+K  L +FPIVA+DTEFPGFLR TPKGV++EEFY CLQFNVNRLSILQLGLTL DE G IGMTWEFNF+DFD+IS
Subjt:  GEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL
        +MEGV SLDSFLKNKGF+F  LRS GI+P+EF R F PILRSG IQRWITFHG YDIAYLMK   I  MP SM+ FAI A  L GTVTDLKHMARY + L
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGL

Query:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDP
        L+GNLGLKKLAK+L VNRIGTAHF GSDSLLTASVYAKM+ + K+   + EGFLYGLP+PI+  R P+ I DP
Subjt:  LDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDP

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 93.3e-4237.69Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGF-----LRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI---------GMTWEFNFRDFD
        REVW+EN   E EL+ + +  +P +++DTEFPG      LR+T      ++ Y  L+ NV+ LS++Q+GLTL D  GN+         G  WEFNFRDFD
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGF-----LRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI---------GMTWEFNFRDFD

Query:  QISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFG-TVTDLKH
           D     S++  L+ +G DFE+    G+  + F  L   ++ SG +      W+TFH +YD  YLMK++  R +P ++  F    + LFG  V D+KH
Subjt:  QISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFG-TVTDLKH

Query:  MARYCNGLLDGNLGLKKLAKLLDVNR-IGTAHFGGSDSLLTASVYAKMKTMFKLPE--HLSEGFLYGL
        M ++C   L G  GL ++A+ L+VNR +G  H  GSDSLLT   + +M+ ++ + +      G LYGL
Subjt:  MARYCNGLLDGNLGLKKLAKLLDVNR-IGTAHFGGSDSLLTASVYAKMKTMFKLPE--HLSEGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 24.2e-4539.03Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYT--------PKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI-------GMTWEFNFRDF
        REVW+ N  +E+ L++Q +  FP VA+DTEFPG +  T        P  +  E  YD L+ NVN L ++QLGLTL DEKGN+          W+FNFR+F
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYT--------PKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI-------GMTWEFNFRDF

Query:  DQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQ----RWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKH
        + ISDM  + S++  L+    D EK    G+  + F  L   ++ SG +      W+TFH  YD  YL+KL+  + +P  ++ F    ++ F  V D+K+
Subjt:  DQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQ----RWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKH

Query:  MARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLS-EGFLYGLPHP
        +  +C  L     GL+K+A+LL V R+G +H  GSDSLLT   + KMK  F     L   GFL+GL +P
Subjt:  MARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLS-EGFLYGLPHP

Q9SAI2 Probable CCR4-associated factor 1 homolog 65.5e-4540.84Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD
        REVW++N +EE++L++  +  FP VA+DTEFPG +   P G      +  Y+ L+ NVN L ++QLGLT  +E+GN+          W+FNFR+FD  SD
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD

Query:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY
        +  + S++  LK  G D  K    GI  + F  L    L S GI       W+TFH  YD  YL+KL+  + +P S   F       F TV D+KH+ ++
Subjt:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY

Query:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL
        CN L   + GL KLA+LL+V R+G  H  GSDSLLT+  + K+K  F + P H   G LYGL
Subjt:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 17.9e-4436.26Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISDMEGVSSLDSF
        R VW  N  EE+  + + L +FP++A DTE+PG +  T    + +E Y  ++ NV    ++Q G TL + KG IG  WE NF +F   SD     S++ F
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTWEFNFRDFDQISDMEGVSSLDSF

Query:  LKNKGFDFEKLRSHGIAPQEFGRLFKP----ILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLLDGNLGL
        L+  G D +K+R  G+    FG  F P    + RS     ++TF G+YD AY + ++    +P +   FA    ++FG V D K MA +C GL + +LGL
Subjt:  LKNKGFDFEKLRSHGIAPQEFGRLFKP----ILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNGLLDGNLGL

Query:  KKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGL-PHPIRALRQPITIGDPSPPSRC
         KLA+LL + R+G AH  GSDSL+TA V+ K+K +++     + G +YG+    + A   P  + +P+ P  C
Subjt:  KKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGL-PHPIRALRQPITIGDPSPPSRC

Q9SKZ2 Probable CCR4-associated factor 1 homolog 77.9e-4439.92Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKG---VTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG--------MTWEFNFRDFDQIS
        REVW++N   E+ L+++ +  FP VA+DTEFPG +   P G      E  Y+ L+ NVN L ++QLGLT  DEKGN+           W+FNFR+FD  S
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKG---VTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG--------MTWEFNFRDFDQIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMAR
        D+    S++  L+  G DF K    GI  + F  L    L S GI       W+TFH  YD  YL+KL+  + +P +   F       F  V D+KH+ +
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMAR

Query:  YCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPE-HLSEGFLYGL
        +CN L   + GL KLA+LLDV R+G  H  GSDSLLT+  + K++  F +       G LYGL
Subjt:  YCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPE-HLSEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-4639.03Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYT--------PKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI-------GMTWEFNFRDF
        REVW+ N  +E+ L++Q +  FP VA+DTEFPG +  T        P  +  E  YD L+ NVN L ++QLGLTL DEKGN+          W+FNFR+F
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYT--------PKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI-------GMTWEFNFRDF

Query:  DQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQ----RWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKH
        + ISDM  + S++  L+    D EK    G+  + F  L   ++ SG +      W+TFH  YD  YL+KL+  + +P  ++ F    ++ F  V D+K+
Subjt:  DQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQ----RWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKH

Query:  MARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLS-EGFLYGLPHP
        +  +C  L     GL+K+A+LL V R+G +H  GSDSLLT   + KMK  F     L   GFL+GL +P
Subjt:  MARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLS-EGFLYGLPHP

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-4639.03Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYT--------PKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI-------GMTWEFNFRDF
        REVW+ N  +E+ L++Q +  FP VA+DTEFPG +  T        P  +  E  YD L+ NVN L ++QLGLTL DEKGN+          W+FNFR+F
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYT--------PKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNI-------GMTWEFNFRDF

Query:  DQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQ----RWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKH
        + ISDM  + S++  L+    D EK    G+  + F  L   ++ SG +      W+TFH  YD  YL+KL+  + +P  ++ F    ++ F  V D+K+
Subjt:  DQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQ----RWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKH

Query:  MARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLS-EGFLYGLPHP
        +  +C  L     GL+K+A+LL V R+G +H  GSDSLLT   + KMK  F     L   GFL+GL +P
Subjt:  MARYCNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLS-EGFLYGLPHP

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-4640.84Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD
        REVW++N +EE++L++  +  FP VA+DTEFPG +   P G      +  Y+ L+ NVN L ++QLGLT  +E+GN+          W+FNFR+FD  SD
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD

Query:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY
        +  + S++  LK  G D  K    GI  + F  L    L S GI       W+TFH  YD  YL+KL+  + +P S   F       F TV D+KH+ ++
Subjt:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY

Query:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL
        CN L   + GL KLA+LL+V R+G  H  GSDSLLT+  + K+K  F + P H   G LYGL
Subjt:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-4640.84Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD
        REVW++N +EE++L++  +  FP VA+DTEFPG +   P G      +  Y+ L+ NVN L ++QLGLT  +E+GN+          W+FNFR+FD  SD
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD

Query:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY
        +  + S++  LK  G D  K    GI  + F  L    L S GI       W+TFH  YD  YL+KL+  + +P S   F       F TV D+KH+ ++
Subjt:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY

Query:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL
        CN L   + GL KLA+LL+V R+G  H  GSDSLLT+  + K+K  F + P H   G LYGL
Subjt:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-4640.84Show/hide
Query:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD
        REVW++N +EE++L++  +  FP VA+DTEFPG +   P G      +  Y+ L+ NVN L ++QLGLT  +E+GN+          W+FNFR+FD  SD
Subjt:  REVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGV---TEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIG-------MTWEFNFRDFDQISD

Query:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY
        +  + S++  LK  G D  K    GI  + F  L    L S GI       W+TFH  YD  YL+KL+  + +P S   F       F TV D+KH+ ++
Subjt:  MEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGI-----QRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARY

Query:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL
        CN L   + GL KLA+LL+V R+G  H  GSDSLLT+  + K+K  F + P H   G LYGL
Subjt:  CNGLLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKL-PEHLSEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGTCCGAAGGGGAAATCGCCAAAAAGAAATTTCCAGAGACGAAATAATCCGGCCACCGGAGAAGCGCCGATCAGTCCAACCCATTGGAAACGAGAGGTTTGGTC
TGAGAATTTCCGGGAAGAAATAGAGCTTTTGAAACAATATCTTCCGAAGTTTCCCATCGTCGCCATTGATACAGAGTTTCCAGGTTTTCTCCGATATACTCCGAAAGGCG
TTACGGAGGAAGAATTTTACGATTGCCTTCAATTTAATGTGAACCGATTGAGCATACTTCAATTGGGTCTCACACTCTGCGATGAGAAGGGAAACATAGGAATGACTTGG
GAGTTTAATTTCAGAGACTTCGATCAGATTTCCGATATGGAAGGGGTTTCTTCGCTTGATTCGTTTTTGAAGAACAAGGGGTTTGATTTTGAGAAATTGAGAAGCCATGG
AATTGCGCCACAGGAATTTGGTAGGCTGTTCAAACCCATTCTTCGGAGTGGTGGAATCCAAAGATGGATTACCTTCCATGGATCTTACGACATTGCTTATCTTATGAAGC
TTGTGGAGATTAGATTCATGCCTGCTTCCATGGCTGCCTTTGCTATCACTGCTCAGCGTTTGTTTGGTACGGTCACCGATCTCAAACACATGGCTCGATACTGCAACGGC
TTGCTCGACGGCAATTTAGGCCTTAAAAAACTGGCTAAATTGCTCGATGTTAACCGAATCGGTACTGCCCATTTTGGTGGTTCGGATAGTTTGCTCACGGCCTCTGTTTA
TGCCAAGATGAAGACCATGTTCAAGCTCCCCGAACACCTCTCTGAAGGCTTTTTATACGGATTGCCTCACCCGATTCGAGCTCTCCGACAACCCATCACTATCGGCGATC
CATCTCCGCCGTCCAGATGCTTGGTGTCGTCTTTCAGCCAATCGCCATTGGTGTTCGTCGGCGATTTCCTTATTATTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGTCCGAAGGGGAAATCGCCAAAAAGAAATTTCCAGAGACGAAATAATCCGGCCACCGGAGAAGCGCCGATCAGTCCAACCCATTGGAAACGAGAGGTTTGGTC
TGAGAATTTCCGGGAAGAAATAGAGCTTTTGAAACAATATCTTCCGAAGTTTCCCATCGTCGCCATTGATACAGAGTTTCCAGGTTTTCTCCGATATACTCCGAAAGGCG
TTACGGAGGAAGAATTTTACGATTGCCTTCAATTTAATGTGAACCGATTGAGCATACTTCAATTGGGTCTCACACTCTGCGATGAGAAGGGAAACATAGGAATGACTTGG
GAGTTTAATTTCAGAGACTTCGATCAGATTTCCGATATGGAAGGGGTTTCTTCGCTTGATTCGTTTTTGAAGAACAAGGGGTTTGATTTTGAGAAATTGAGAAGCCATGG
AATTGCGCCACAGGAATTTGGTAGGCTGTTCAAACCCATTCTTCGGAGTGGTGGAATCCAAAGATGGATTACCTTCCATGGATCTTACGACATTGCTTATCTTATGAAGC
TTGTGGAGATTAGATTCATGCCTGCTTCCATGGCTGCCTTTGCTATCACTGCTCAGCGTTTGTTTGGTACGGTCACCGATCTCAAACACATGGCTCGATACTGCAACGGC
TTGCTCGACGGCAATTTAGGCCTTAAAAAACTGGCTAAATTGCTCGATGTTAACCGAATCGGTACTGCCCATTTTGGTGGTTCGGATAGTTTGCTCACGGCCTCTGTTTA
TGCCAAGATGAAGACCATGTTCAAGCTCCCCGAACACCTCTCTGAAGGCTTTTTATACGGATTGCCTCACCCGATTCGAGCTCTCCGACAACCCATCACTATCGGCGATC
CATCTCCGCCGTCCAGATGCTTGGTGTCGTCTTTCAGCCAATCGCCATTGGTGTTCGTCGGCGATTTCCTTATTATTGGTTGA
Protein sequenceShow/hide protein sequence
MKSPKGKSPKRNFQRRNNPATGEAPISPTHWKREVWSENFREEIELLKQYLPKFPIVAIDTEFPGFLRYTPKGVTEEEFYDCLQFNVNRLSILQLGLTLCDEKGNIGMTW
EFNFRDFDQISDMEGVSSLDSFLKNKGFDFEKLRSHGIAPQEFGRLFKPILRSGGIQRWITFHGSYDIAYLMKLVEIRFMPASMAAFAITAQRLFGTVTDLKHMARYCNG
LLDGNLGLKKLAKLLDVNRIGTAHFGGSDSLLTASVYAKMKTMFKLPEHLSEGFLYGLPHPIRALRQPITIGDPSPPSRCLVSSFSQSPLVFVGDFLIIG