CuGenDBv2

Gene ID	Clc07G02230
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	50S ribosomal protein L35
Genome location	ClcChr07:2224518..2227181
RNA-Seq Expression	Clc07G02230
Synteny	Clc07G02230
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR037229 - Ribosomal protein L35 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0068151.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]

1.7e-61

92.2

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQIV SVSSTRRIFHSA SLYQPLHFSPNNLNSRSLFNA  QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRR KRKPTTPATS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSKGP
        KLKKTKLK YSSYKSRFW+MKDG+IKRRMEGKRHNAHSK P
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSKGP

XP_004144409.1 uncharacterized protein LOC101219338 [Cucumis sativus]

2.5e-60

92.09

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLR C KLRSAAAKPSQI+NSVSSTRRIFHSA SLYQPLHFS NNLNSRSLFNAS QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRR KRKPTTPATS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTKLK YSSYKSRFW+MKDG+IKRRMEGKRHNAHSK
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

XP_008460439.1 PREDICTED: uncharacterized protein LOC103499252 [Cucumis melo]

3.8e-61

92.81

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQIV SVSSTRRIFHSA SLYQPLHFSPNNLNSRSLFNA  QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRR KRKPTTPATS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTKLK YSSYKSRFW+MKDG+IKRRMEGKRHNAHSK
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

7.9e-59

87.05

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQ+V+SVSSTRRIFHS+ SLYQPLHF+PNNL+SRS+FNASLQTHS LAAYQCIRSS LPLSVVQVRHVSSR+RRK+RKP TP TS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTK+KFYSSYKSRFWMMKDG+IKRR EGKRHNAH K
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

XP_038887770.1 uncharacterized protein LOC120077803 [Benincasa hispida]

2.4e-63

93.53

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQIVNS SSTRRIFHS++SLYQPLHFSPNNLNSRSLFNAS QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRRKKRK TTP TS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTKLKFYSSYKSRFWMMKDG+IKRRMEGKRHNAHSK
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBT5 Uncharacterized protein

1.2e-60

92.09

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLR C KLRSAAAKPSQI+NSVSSTRRIFHSA SLYQPLHFS NNLNSRSLFNAS QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRR KRKPTTPATS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTKLK YSSYKSRFW+MKDG+IKRRMEGKRHNAHSK
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

A0A1S3CDR4 uncharacterized protein LOC103499252

1.8e-61

92.81

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQIV SVSSTRRIFHSA SLYQPLHFSPNNLNSRSLFNA  QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRR KRKPTTPATS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTKLK YSSYKSRFW+MKDG+IKRRMEGKRHNAHSK
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

A0A5A7VRB4 50S ribosomal protein L35

8.3e-62

92.2

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQIV SVSSTRRIFHSA SLYQPLHFSPNNLNSRSLFNA  QTHSPLAAYQCIRSS LPLSVVQVRHVSSRDRR KRKPTTPATS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSKGP
        KLKKTKLK YSSYKSRFW+MKDG+IKRRMEGKRHNAHSK P
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSKGP

A0A6J1DPB8 uncharacterized protein LOC111023059

3.8e-59

87.05

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQ+V+SVSSTRRIFHS+ SLYQPLHF+PNNL+SRS+FNASLQTHS LAAYQCIRSS LPLSVVQVRHVSSR+RRK+RKP TP TS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTK+KFYSSYKSRFWMMKDG+IKRR EGKRHNAH K
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

A0A6J1KAA4 uncharacterized protein LOC111491530

5.2e-56

84.17

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS
        MLRWC KLRSAAAKPSQIV+SVSSTRRIFHS  SLYQPLHFSPNNL+SRSL NASLQTHS LAAYQCIRSS  PL  VQVRHVSSR+R+K+RKP TP TS
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATS

Query:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
        KLKKTK+KFYSSYKSRFW+ KDG+IKRR EGKRHNAH K
Subjt:  KLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

3.4e-15

37.91

Show/hide

Query:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPN---NLNSRSL--FNASLQTHSPLAA-----YQCIRSSFLPLSVVQVRHVSSRDR--
        M R+C KLRS          S+ S R +    +S ++ +H SP+   +L + +L   N++  +  P A         + ++F+P   VQVR+++S+++  
Subjt:  MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPN---NLNSRSL--FNASLQTHSPLAA-----YQCIRSSFLPLSVVQVRHVSSRDR--

Query:  --RKKRKPTTPATSKLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK
          +KK +P TP TSK+KK K+KFYSS+K RF  + DG I+R  EGKRHNAH K
Subjt:  --RKKRKPTTPATSKLKKTKLKFYSSYKSRFWMMKDGNIKRRMEGKRHNAHSK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTCAGGTGGTGCGTCAAGCTCCGATCTGCGGCGGCGAAGCCATCTCAAATTGTAAATTCCGTTTCTTCTACCCGCAGGATCTTTCACTCTGCCTCATCACTATACCA
GCCCCTCCATTTCTCTCCGAATAATTTGAATTCCAGGTCCCTTTTCAATGCATCTCTTCAGACTCATTCTCCGCTTGCGGCTTATCAGTGTATTCGGTCTTCGTTCTTGC
CTCTCTCTGTTGTTCAAGTGCGGCATGTTTCATCAAGAGACCGACGGAAGAAGAGAAAGCCGACAACGCCAGCCACTTCCAAATTAAAGAAAACTAAACTGAAATTTTAC
TCGTCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAACATTAAACGTCGAATGGAAGGAAAAAGGCACAATGCACATTCCAAGGGACCCTTGAAAACGAGTGCAAA
ATGGATTCATTGTTGGAATGGCTTAGGCAGCAGACAGTTGAACTACTTTTGGCTGAGGGTTAGAAAAGTTCTGTCTTTCCAAAACAAAGGTAAAGAAATTGAATATGGCA
GTCAAGATTTTCAAGAAAACAGGGGAGTCAACACCCTACAGCCAAAGAAGCAGCTGGGACCTCACTTAGGCGGTTCAAAAGAACAAGAACCTTCAAGATTTCATCCAAGA
AAGATAGTACCAGACGCTCGACTAGGTGATTCCGCCTTAAATCCCACATCCAACCTTCATTTTCACACTTTTTGGCCGCATTTCAAGGACCCTTTCATCCTGTCATGGGA
ACCAGAACTAGCTCTCCAGAGGAAGAAGAAGCCTTCACTTCTTTTCCTGATCACCACCAACGTCACCCACATTCTTCATCTCCTTATCAAGAATCGTACCAAGGCAATCA
AGAACCATTCCAAGAAGGCCATTACCACATAA

mRNA sequence

Show/hide mRNA sequence

CTCTCTCAAGAATTTCCCTTCGCCCTTGGAGTACGACGGCGACGACGATGCTCAGGTGGTGCGTCAAGCTCCGATCTGCGGCGGCGAAGCCATCTCAAATTGTAAATTCC
GTTTCTTCTACCCGCAGGATCTTTCACTCTGCCTCATCACTATACCAGCCCCTCCATTTCTCTCCGAATAATTTGAATTCCAGGTCCCTTTTCAATGCATCTCTTCAGAC
TCATTCTCCGCTTGCGGCTTATCAGTGTATTCGGTCTTCGTTCTTGCCTCTCTCTGTTGTTCAAGTGCGGCATGTTTCATCAAGAGACCGACGGAAGAAGAGAAAGCCGA
CAACGCCAGCCACTTCCAAATTAAAGAAAACTAAACTGAAATTTTACTCGTCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAACATTAAACGTCGAATGGAAGGA
AAAAGGCACAATGCACATTCCAAGGGACCCTTGAAAACGAGTGCAAAATGGATTCATTGTTGGAATGGCTTAGGCAGCAGACAGTTGAACTACTTTTGGCTGAGGGTTAG
AAAAGTTCTGTCTTTCCAAAACAAAGGTAAAGAAATTGAATATGGCAGTCAAGATTTTCAAGAAAACAGGGGAGTCAACACCCTACAGCCAAAGAAGCAGCTGGGACCTC
ACTTAGGCGGTTCAAAAGAACAAGAACCTTCAAGATTTCATCCAAGAAAGATAGTACCAGACGCTCGACTAGGTGATTCCGCCTTAAATCCCACATCCAACCTTCATTTT
CACACTTTTTGGCCGCATTTCAAGGACCCTTTCATCCTGTCATGGGAACCAGAACTAGCTCTCCAGAGGAAGAAGAAGCCTTCACTTCTTTTCCTGATCACCACCAACGT
CACCCACATTCTTCATCTCCTTATCAAGAATCGTACCAAGGCAATCAAGAACCATTCCAAGAAGGCCATTACCACATAA

Protein sequence

Show/hide protein sequence

MLRWCVKLRSAAAKPSQIVNSVSSTRRIFHSASSLYQPLHFSPNNLNSRSLFNASLQTHSPLAAYQCIRSSFLPLSVVQVRHVSSRDRRKKRKPTTPATSKLKKTKLKFY
SSYKSRFWMMKDGNIKRRMEGKRHNAHSKGPLKTSAKWIHCWNGLGSRQLNYFWLRVRKVLSFQNKGKEIEYGSQDFQENRGVNTLQPKKQLGPHLGGSKEQEPSRFHPR
KIVPDARLGDSALNPTSNLHFHTFWPHFKDPFILSWEPELALQRKKKPSLLFLITTNVTHILHLLIKNRTKAIKNHSKKAITT

Clc07G02230 (gene) of Watermelon (cordophanus) v2 genome