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Clc07G02560 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G02560
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:2538931..2539751
RNA-Seq ExpressionClc07G02560
SyntenyClc07G02560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022948.1 hypothetical protein SDJN02_16684, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-0843.09Show/hide
Query:  MTLHAPQNPARFRSIRASSMARIK---------------TKLLFELFARTRASSSPPPLAGNLQGK-----------RRISCLLRHYYRCSSHYVSVEFP
        M  H+P NP RFRSIR SSMARI+                 LL E   RT  S+    +  +   K              S LL  +    S  VSVEFP
Subjt:  MTLHAPQNPARFRSIRASSMARIK---------------TKLLFELFARTRASSSPPPLAGNLQGK-----------RRISCLLRHYYRCSSHYVSVEFP

Query:  SDLGVGEYSSAGIGLASSCLGLE
        SDLGVG YSSAG+ LAS CLGLE
Subjt:  SDLGVGEYSSAGIGLASSCLGLE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGGCGAGAGGCAATCTGCATGTTGATTCCAGCGGGGAAATCGAGATGACGCTTCATGCTCCCCAAAATCCGGCCAGATTTCGCAGCATCAGAGCGTCTTCCAT
GGCTCGTATCAAGACGAAGCTCCTCTTTGAGCTGTTCGCTCGAACAAGGGCGTCGTCATCACCTCCTCCTTTGGCTGGAAATCTTCAAGGCAAACGGCGCATCTCTTGCC
TTCTTCGTCACTATTACCGTTGTTCCTCTCATTATGTTAGCGTCGAGTTCCCTTCGGATCTTGGAGTTGGCGAGTACAGCTCTGCAGGTATTGGACTGGCCTCAAGCTGT
CTCGGTCTGGAGTGTGTGATGATTCTGACTATTGCGGGTGGTTCTTCTGGAGGGCTGAAATTTTCTCAAAAAGTGAATGAATTATCAATAAAAAATGGAGGATATGGACT
TTACTTGCAGGATATAAGGACAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGGCGAGAGGCAATCTGCATGTTGATTCCAGCGGGGAAATCGAGATGACGCTTCATGCTCCCCAAAATCCGGCCAGATTTCGCAGCATCAGAGCGTCTTCCAT
GGCTCGTATCAAGACGAAGCTCCTCTTTGAGCTGTTCGCTCGAACAAGGGCGTCGTCATCACCTCCTCCTTTGGCTGGAAATCTTCAAGGCAAACGGCGCATCTCTTGCC
TTCTTCGTCACTATTACCGTTGTTCCTCTCATTATGTTAGCGTCGAGTTCCCTTCGGATCTTGGAGTTGGCGAGTACAGCTCTGCAGGTATTGGACTGGCCTCAAGCTGT
CTCGGTCTGGAGTGTGTGATGATTCTGACTATTGCGGGTGGTTCTTCTGGAGGGCTGAAATTTTCTCAAAAAGTGAATGAATTATCAATAAAAAATGGAGGATATGGACT
TTACTTGCAGGATATAAGGACAATGTAA
Protein sequenceShow/hide protein sequence
MSSARGNLHVDSSGEIEMTLHAPQNPARFRSIRASSMARIKTKLLFELFARTRASSSPPPLAGNLQGKRRISCLLRHYYRCSSHYVSVEFPSDLGVGEYSSAGIGLASSC
LGLECVMILTIAGGSSGGLKFSQKVNELSIKNGGYGLYLQDIRTM