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Clc07G03045 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G03045
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:2900194..2900911
RNA-Seq ExpressionClc07G03045
SyntenyClc07G03045
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887227.1 disease resistance protein At4g27190-like [Benincasa hispida]3.1e-0947.56Show/hide
Query:  MGAAVGVLVDYTIKPISHHLDYLFCYNENIKK---------------------DKAKRNAIFDGVTKWLDDAENVLEMGQQN
        M A VGV+V+YTI+PI H L YLF YN N+KK                     DK K NAIFD VTKWLD+ + V  M +QN
Subjt:  MGAAVGVLVDYTIKPISHHLDYLFCYNENIKK---------------------DKAKRNAIFDGVTKWLDDAENVLEMGQQN

XP_038887228.1 probable disease resistance protein At5g43740 [Benincasa hispida]1.5e-0847.56Show/hide
Query:  MGAAVGVLVDYTIKPISHHLDYLFCYNENIKK---------------------DKAKRNAIFDGVTKWLDDAENVLEMGQQN
        M A VGV+V+YTI PI H L YLF YN NIKK                     DK K NAIF+ VTKWLD+ + V +M +QN
Subjt:  MGAAVGVLVDYTIKPISHHLDYLFCYNENIKK---------------------DKAKRNAIFDGVTKWLDDAENVLEMGQQN

XP_038887230.1 probable disease resistance protein At5g63020 [Benincasa hispida]2.3e-1253.66Show/hide
Query:  MGAAVGVLVDYTIKPISHHLDYLFCYNENIK---------------------KDKAKRNAIFDGVTKWLDDAENVLEMGQQN
        M A VGVL DYTIKPI H LDYLF Y  NIK                     +DK K NAIFDGVT WLD+ +NVL+M QQN
Subjt:  MGAAVGVLVDYTIKPISHHLDYLFCYNENIK---------------------KDKAKRNAIFDGVTKWLDDAENVLEMGQQN

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCTGCAGTTGGAGTATTAGTGGATTACACAATTAAACCAATTTCTCATCACTTAGATTATCTGTTTTGCTACAACGAAAATATTAAGAAAGATAAAGCCAAAAG
GAATGCAATCTTTGATGGAGTTACCAAGTGGTTGGACGATGCAGAGAATGTGCTCGAGATGGGACAACAAAATGGAGGATTAAAGAAGTTACCAATTGCGATTAAAATTA
TAGCAAAAGCATTGAAGGGGAAAGAAGTAGAGATATGGAAGGATGTTTTCAAGACATTGAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCTGCAGTTGGAGTATTAGTGGATTACACAATTAAACCAATTTCTCATCACTTAGATTATCTGTTTTGCTACAACGAAAATATTAAGAAAGATAAAGCCAAAAG
GAATGCAATCTTTGATGGAGTTACCAAGTGGTTGGACGATGCAGAGAATGTGCTCGAGATGGGACAACAAAATGGAGGATTAAAGAAGTTACCAATTGCGATTAAAATTA
TAGCAAAAGCATTGAAGGGGAAAGAAGTAGAGATATGGAAGGATGTTTTCAAGACATTGAAAAAGTAA
Protein sequenceShow/hide protein sequence
MGAAVGVLVDYTIKPISHHLDYLFCYNENIKKDKAKRNAIFDGVTKWLDDAENVLEMGQQNGGLKKLPIAIKIIAKALKGKEVEIWKDVFKTLKK