; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G03230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G03230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationClcChr07:3134880..3151808
RNA-Seq ExpressionClc07G03230
SyntenyClc07G03230
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601004.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. sororia]2.1e-15074.03Show/hide
Query:  MLHPPGGWKNQFLWGQRHLKESLIEMDMKNGGAASTSRSAYSITLNSQSFASRVHRNQIEEESLFPLFLLFP---SGRNMRRYSPPYHSPPRRGYGGRGR
        +L+ P GWKNQF  G +  +  L        G     ++AY +      F  R  RNQIE +    +FL+FP   SGRNMRRYSPPYHSPPRRGYGGRGR
Subjt:  MLHPPGGWKNQFLWGQRHLKESLIEMDMKNGGAASTSRSAYSITLNSQSFASRVHRNQIEEESLFPLFLLFP---SGRNMRRYSPPYHSPPRRGYGGRGR

Query:  SPPGRGY---GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
        SPPGRGY   GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI V
Subjt:  SPPGRGY---GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV

Query:  VLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQV
        VLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RRHADYP SPRGA RERDGERSRQV
Subjt:  VLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQV

Query:  YSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGSKNKLVEWLPSEVAEIGCRKWLPELAVEGKAVSLF
        YSPGYDNAD  D   +GNGNGNGYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADASPRH                                VSLF
Subjt:  YSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGSKNKLVEWLPSEVAEIGCRKWLPELAVEGKAVSLF

Query:  GDLRVSNFFAIS
         D RVSNFFAIS
Subjt:  GDLRVSNFFAIS

KAG7031619.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-14090.85Show/hide
Query:  FPLFLLFPSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGF
        F +F LF SGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTG+PRGF
Subjt:  FPLFLLFPSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGF

Query:  AFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDY
        AFVEFVDPYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSPRHPSGSRSR+RSRSYSPAPRWRGDY
Subjt:  AFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDY

Query:  SVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
        SVSP RRHADYP SPRGA RERDGERSRQVYSPGYDNAD  D     +GNGNGYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADASPRHG
Subjt:  SVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG

XP_008461655.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo]2.1e-14294.39Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD

Query:  YPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
        YPESPRGAPRERD ERSRQVYSPGYDNAD+HD       NGNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHG
Subjt:  YPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG

XP_038892246.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida]1.3e-13992.44Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHY---GRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHY   GRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHY---GRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP

Query:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
         RRHADYPESPRG PRERD ER+RQVYSPGYDNADDH+H      NGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
Subjt:  GRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG

XP_038892248.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida]3.1e-14193.4Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
        HADYPESPRG PRERD ER+RQVYSPGYDNADDH+H      NGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
Subjt:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG

TrEMBL top hitse value%identityAlignment
A0A0A0KNV5 RRM domain-containing protein2.7e-13590.03Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY------GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY      GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFV
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY------GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV

Query:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR
        DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR
Subjt:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGR

Query:  RHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKS-AFEGED-ARANWRSSPGRTSRSPSGSRSRSADASPRHG
        RH DYPESPRGAPRERD ERSRQVYSPGYDNAD+H        NGNGYHDKS + E +D  R NWR+SPGRTSRSPSGSRSRSADASPRHG
Subjt:  RHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKS-AFEGED-ARANWRSSPGRTSRSPSGSRSRSADASPRHG

A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL301.0e-14294.39Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS YGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD

Query:  YPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
        YPESPRGAPRERD ERSRQVYSPGYDNAD+HD       NGNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHG
Subjt:  YPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG

A0A6J1CBL6 serine/arginine-rich SC35-like splicing factor SCL302.7e-13589.35Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSP RRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHAD

Query:  YPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANW------RSSPGRTSRSPSGSRSRSADASPRHG
        YP SPRGAP ERDGERS+Q YSPGYDNAD HDH      +GNGYHDKSAFEG D RANW      RSSPGR SRSPSGSRSRSADASPRHG
Subjt:  YPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANW------RSSPGRTSRSPSGSRSRSADASPRHG

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL303.4e-13892.23Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYP
        EAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RRHADYP
Subjt:  EAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYP

Query:  ESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
         SPRGA RERDGER+RQVYSPGYDNAD  D     +GNGNGYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADASPRHG
Subjt:  ESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL301.1e-13690.97Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELR PFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRS+SRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG
        HADYP SPRGA RERDGERSRQVYSPGYDNAD  D     +GNGNGYHDK AFEGEDARANWR SP RTSRSPSGSRSRSADASPRHG
Subjt:  HADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHG

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL284.3e-2140.71Show/hide
Query:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        R YS  P   SPP  R+GY        P  R +   G  G           LL+RN+P+D RP +LR  FERFG ++D+Y+P++YYTGEPRGF FV++  
Subjt:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
          +A+EA   MN K   GREI +V A E+RK P++M  R+  G S   GR   Y R+  RS  R    R+ S SRSR   R  S   + R D   SP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSP
              SP   PR     +SR   SP
Subjt:  HADYPESPRGAPRERDGERSRQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL301.0e-7562.76Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGG  G RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD 
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG         
Subjt:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPR
               PRG   E D   SR+ YSPGY+     A D D NG+     N   +K  +E ED R   R+     SRSPSGSRSRS + SPR
Subjt:  HADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPR

Q9BRL6 Serine/arginine-rich splicing factor 84.9e-1737.55Show/hide
Query:  SLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---SY
        +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  M+G +  GRE+ V +A   R+   + RQ   RG S    Y
Subjt:  SLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---SY

Query:  GGRRSHYGR----SRSRSLSRSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVY-SPGYDNA--DDHDHNGN
        G R   YGR     R R  SRSR P    S SRSRYR   YS +P  R  YS       + Y  SP    R R+       Y S GY N+    +  + +
Subjt:  GGRRSHYGR----SRSRSLSRSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVY-SPGYDNA--DDHDHNGN

Query:  GNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGSKNK
         + +G+    +SA   + + A  RS     SRS S SRS S   SP   SK K
Subjt:  GNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGSKNK

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A5.1e-3041.03Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  GG       R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+E
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPE
        A++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+            P +RH     
Subjt:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPE

Query:  SPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGN----GYHDKSAFEGEDARANWRSSPGRT-SRSPSGSRSRSADASPRHGSKN
        SP+    E++   SR   SP         HNG+   +G+      H +S       R N   +P +  S+SP   +SRS    PR G++N
Subjt:  SPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGN----GYHDKSAFEGEDARANWRSSPGRT-SRSPSGSRSRSADASPRHGSKN

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.5e-3449.54Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHADYP
        A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     D  
Subjt:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHADYP

Query:  ESPRGAPRERDGERSRQV
         S   +P   DG R R +
Subjt:  ESPRGAPRERDGERSRQV

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 331.1e-3549.54Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHADYP
        A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     D  
Subjt:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHADYP

Query:  ESPRGAPRERDGERSRQV
         S   +P   DG R R +
Subjt:  ESPRGAPRERDGERSRQV

AT1G55310.2 SC35-like splicing factor 331.1e-3549.54Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHADYP
        A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     D  
Subjt:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRS-YSPAPRWRGDYSVSPGRRHADYP

Query:  ESPRGAPRERDGERSRQV
         S   +P   DG R R +
Subjt:  ESPRGAPRERDGERSRQV

AT1G55310.3 SC35-like splicing factor 331.2e-3144.06Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTG------------EPRGFA
        R Y+P   SPP RGYG RGRSP  RG  G      GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG            +PRGF 
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTG------------EPRGFA

Query:  FVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS
        FV+F+DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   RSR RS          GDY 
Subjt:  FVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYS

Query:  VSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRS
          P RRH     SPR      DG RS    SP  D        G+   +      KS       R +   SP R SRSPS  R+RS
Subjt:  VSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRS

AT3G13570.1 SC35-like splicing factor 30A3.6e-3141.03Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE
        R Y+P   SPP RGYG RGRSP  RG  GG       R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+E
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPE
        A++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+            P +RH     
Subjt:  AQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPE

Query:  SPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGN----GYHDKSAFEGEDARANWRSSPGRT-SRSPSGSRSRSADASPRHGSKN
        SP+    E++   SR   SP         HNG+   +G+      H +S       R N   +P +  S+SP   +SRS    PR G++N
Subjt:  SPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGN----GYHDKSAFEGEDARANWRSSPGRT-SRSPSGSRSRSADASPRHGSKN

AT3G55460.1 SC35-like splicing factor 307.4e-7762.76Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGG  G RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD 
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDP

Query:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR
        Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRYRSRSYSPAPR RG         
Subjt:  YEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSSYGGRRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRR

Query:  HADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPR
               PRG   E D   SR+ YSPGY+     A D D NG+     N   +K  +E ED R   R+     SRSPSGSRSRS + SPR
Subjt:  HADYPESPRGAPRERDGERSRQVYSPGYDN----ADDHDHNGNGNGNGNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCATCCACCTGGAGGCTGGAAGAACCAATTTTTGTGGGGGCAAAGGCACCTCAAGGAAAGCTTGATAGAGATGGATATGAAGAATGGGGGGGCAGCCAGCACATC
CAGGTCTGCTTATTCTATAACTCTAAATTCACAGTCTTTTGCTTCGAGAGTTCATAGAAATCAGATCGAGGAAGAATCTCTCTTTCCCCTCTTCCTTCTCTTTCCTTCAG
GTCGAAACATGAGAAGATACAGCCCACCATATCATAGTCCTCCGAGAAGAGGATACGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGCGGTGGTGGCGGCGGG
GGGTATGGAAGACGAAGAGAACAGCCTCATGGTAGCCTTCTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGTGCCATTTGAGAGGTTTGGACTTGT
TCGAGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCGTTCGTGGAGTTTGTTGATCCTTATGAGGCTTCTGAAGCTCAGTACCATATGAATG
GGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAAATGCGGCAAAGGAGTAGAAGGGGACCATCTAGCTATGGTGGA
CGCCGTTCTCATTATGGGCGTTCTAGATCTCGTTCATTATCCAGGTCACGCTCCCCCCGTCATCCATCGGGTTCAAGAAGTAGATACCGATCAAGGTCCTACTCTCCTGC
TCCAAGATGGCGAGGTGACTATTCTGTTTCCCCTGGTAGAAGGCATGCAGATTACCCTGAATCACCCAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGAAGTCGACAAG
TATATTCTCCCGGTTATGATAATGCTGATGACCACGATCACAATGGAAATGGAAATGGAAATGGAAATGGATATCATGACAAGTCTGCATTTGAAGGGGAGGATGCACGA
GCTAATTGGAGGTCATCTCCTGGTAGAACATCAAGATCTCCTTCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACATGGATCGAAGAATAAGTTGGTGGAGTG
GCTGCCATCGGAGGTCGCGGAAATTGGCTGTCGGAAGTGGTTACCGGAGTTAGCCGTTGAAGGCAAGGCAGTATCGCTTTTCGGCGATTTGAGGGTTTCGAATTTCTTCG
CCATTTCGAATTGTCTAGTGGAAGCTGCAGATGTATGTGATTGGGTAGAAAGAAAGTCTGAGAAATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCATCCACCTGGAGGCTGGAAGAACCAATTTTTGTGGGGGCAAAGGCACCTCAAGGAAAGCTTGATAGAGATGGATATGAAGAATGGGGGGGCAGCCAGCACATC
CAGGTCTGCTTATTCTATAACTCTAAATTCACAGTCTTTTGCTTCGAGAGTTCATAGAAATCAGATCGAGGAAGAATCTCTCTTTCCCCTCTTCCTTCTCTTTCCTTCAG
GTCGAAACATGAGAAGATACAGCCCACCATATCATAGTCCTCCGAGAAGAGGATACGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGCGGTGGTGGCGGCGGG
GGGTATGGAAGACGAAGAGAACAGCCTCATGGTAGCCTTCTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGTGCCATTTGAGAGGTTTGGACTTGT
TCGAGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCGTTCGTGGAGTTTGTTGATCCTTATGAGGCTTCTGAAGCTCAGTACCATATGAATG
GGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAAATGCGGCAAAGGAGTAGAAGGGGACCATCTAGCTATGGTGGA
CGCCGTTCTCATTATGGGCGTTCTAGATCTCGTTCATTATCCAGGTCACGCTCCCCCCGTCATCCATCGGGTTCAAGAAGTAGATACCGATCAAGGTCCTACTCTCCTGC
TCCAAGATGGCGAGGTGACTATTCTGTTTCCCCTGGTAGAAGGCATGCAGATTACCCTGAATCACCCAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGAAGTCGACAAG
TATATTCTCCCGGTTATGATAATGCTGATGACCACGATCACAATGGAAATGGAAATGGAAATGGAAATGGATATCATGACAAGTCTGCATTTGAAGGGGAGGATGCACGA
GCTAATTGGAGGTCATCTCCTGGTAGAACATCAAGATCTCCTTCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACATGGATCGAAGAATAAGTTGGTGGAGTG
GCTGCCATCGGAGGTCGCGGAAATTGGCTGTCGGAAGTGGTTACCGGAGTTAGCCGTTGAAGGCAAGGCAGTATCGCTTTTCGGCGATTTGAGGGTTTCGAATTTCTTCG
CCATTTCGAATTGTCTAGTGGAAGCTGCAGATGTATGTGATTGGGTAGAAAGAAAGTCTGAGAAATATTGA
Protein sequenceShow/hide protein sequence
MLHPPGGWKNQFLWGQRHLKESLIEMDMKNGGAASTSRSAYSITLNSQSFASRVHRNQIEEESLFPLFLLFPSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGG
GYGRRREQPHGSLLVRNIPMDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSSYGG
RRSHYGRSRSRSLSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDGERSRQVYSPGYDNADDHDHNGNGNGNGNGYHDKSAFEGEDAR
ANWRSSPGRTSRSPSGSRSRSADASPRHGSKNKLVEWLPSEVAEIGCRKWLPELAVEGKAVSLFGDLRVSNFFAISNCLVEAADVCDWVERKSEKY