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Clc07G03310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G03310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:3240610..3241127
RNA-Seq ExpressionClc07G03310
SyntenyClc07G03310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600053.1 hypothetical protein SDJN03_05286, partial [Cucurbita argyrosperma subsp. sororia]8.3e-1660.71Show/hide
Query:  MAEQNIRLLVLGFLFLGLFVSCQCVHLHGFI--IQAAESREVKLGRRFMFDDTRK--EEVRGRSQKNPSGPNPIGNRHPPSIHG
        M EQN R LVL +L  GL +S QCVH  GF+   ++AESR+ + GR+FMF DT K  E+VR   +KNPSGPNPIGNRHPPSI G
Subjt:  MAEQNIRLLVLGFLFLGLFVSCQCVHLHGFI--IQAAESREVKLGRRFMFDDTRK--EEVRGRSQKNPSGPNPIGNRHPPSIHG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCAAAATATAAGGCTGCTAGTTCTTGGTTTCCTCTTTTTGGGCCTCTTCGTATCTTGTCAATGTGTTCATTTGCATGGCTTCATAATTCAAGCGGCTGAATC
CAGAGAAGTGAAATTGGGGAGAAGATTCATGTTTGACGACACAAGGAAAGAAGAGGTGAGAGGGAGAAGTCAGAAGAATCCTTCAGGGCCGAACCCTATTGGGAATCGAC
ACCCACCGTCAATCCATGGCTGA
mRNA sequenceShow/hide mRNA sequence
GAAATGGCAGAGCAAAATATAAGGCTGCTAGTTCTTGGTTTCCTCTTTTTGGGCCTCTTCGTATCTTGTCAATGTGTTCATTTGCATGGCTTCATAATTCAAGCGGCTGA
ATCCAGAGAAGTGAAATTGGGGAGAAGATTCATGTTTGACGACACAAGGAAAGAAGAGGTGAGAGGGAGAAGTCAGAAGAATCCTTCAGGGCCGAACCCTATTGGGAATC
GACACCCACCGTCAATCCATGGCTGAACATTTGTGAGATTTTCGTTTGTGAAGATGAAGAATGTTAAAATTTAATGGAGTTCTTTATATAAAAATTTGGCATTGGTGGGA
TTTTTTTTTACTAAGTTTCTTAAACTTTTTGTATTTTGCGGCAATTCAACTAAGTAGATAAATACCCAAACTATTATCCTAAACGTTCACAATTCTAAC
Protein sequenceShow/hide protein sequence
MAEQNIRLLVLGFLFLGLFVSCQCVHLHGFIIQAAESREVKLGRRFMFDDTRKEEVRGRSQKNPSGPNPIGNRHPPSIHG