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Clc07G03580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G03580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionZinc finger, C2H2-like protein
Genome locationClcChr07:3571222..3572109
RNA-Seq ExpressionClc07G03580
SyntenyClc07G03580
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600035.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3261.59Show/hide
Query:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN
        MAETH +WRQIL      K +P W +EKAFA+D  AAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA+LQN+PNR F IKP+PT DL  + F PKN
Subjt:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN

Query:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL
        + S   +    LK+ K+  S           LDLELKL
Subjt:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL

XP_004151402.2 zinc finger protein 11 [Cucumis sativus]2.3e-5586.76Show/hide
Query:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKP-SPTFDLLPHHFSPKNNTSPLY
        MA+THQ+WRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKP +PTFDLL HHFSPKNN S   
Subjt:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKP-SPTFDLLPHHFSPKNNTSPLY

Query:  NPPFSLKKPKL----SSSSSSSSNSELLHLDLELKL
         PPFSLKKPKL    SSSSSSSSNSE LHLDLELKL
Subjt:  NPPFSLKKPKL----SSSSSSSSNSELLHLDLELKL

XP_008461701.1 PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]1.4e-5790.15Show/hide
Query:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPN-RPFFIKPSPTFDLLPHHFSPKNNTSPLY
        MAETHQVWRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRAKLQNHPN RPFFIKP+PTFDLL HHFSPKNN S   
Subjt:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPN-RPFFIKPSPTFDLLPHHFSPKNNTSPLY

Query:  NPPFSLKKPKLSSSSSSSSNSELLHLDLELKL
         PPFSLKKPKL+SSSSSSSNSE LHLDLELKL
Subjt:  NPPFSLKKPKLSSSSSSSSNSELLHLDLELKL

XP_022988302.1 zinc finger protein 10-like [Cucurbita maxima]1.9e-3362.32Show/hide
Query:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN
        MAETH +WRQIL      K +P W +EKAFA+D  AAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA+LQN+PNR F IKP+PT DL  H F PKN
Subjt:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN

Query:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL
        + S   +    LK+ K+  S           LDLELKL
Subjt:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL

XP_023542190.1 zinc finger protein 10-like [Cucurbita pepo subsp. pepo]5.0e-3463.04Show/hide
Query:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN
        MAETH +WRQIL      K +P W +EKAFA+D  AAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA+LQN+PNR F IKP+PT DL  H F PKN
Subjt:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN

Query:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL
        N S   +    LK+ K+  S           LDLELKL
Subjt:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ3 C2H2-type domain-containing protein1.1e-5586.76Show/hide
Query:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKP-SPTFDLLPHHFSPKNNTSPLY
        MA+THQ+WRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKP +PTFDLL HHFSPKNN S   
Subjt:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKP-SPTFDLLPHHFSPKNNTSPLY

Query:  NPPFSLKKPKL----SSSSSSSSNSELLHLDLELKL
         PPFSLKKPKL    SSSSSSSSNSE LHLDLELKL
Subjt:  NPPFSLKKPKL----SSSSSSSSNSELLHLDLELKL

A0A1S3CGM6 transcriptional regulator SUPERMAN-like7.0e-5890.15Show/hide
Query:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPN-RPFFIKPSPTFDLLPHHFSPKNNTSPLY
        MAETHQVWRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRAKLQNHPN RPFFIKP+PTFDLL HHFSPKNN S   
Subjt:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPN-RPFFIKPSPTFDLLPHHFSPKNNTSPLY

Query:  NPPFSLKKPKLSSSSSSSSNSELLHLDLELKL
         PPFSLKKPKL+SSSSSSSNSE LHLDLELKL
Subjt:  NPPFSLKKPKLSSSSSSSSNSELLHLDLELKL

A0A5A7UA35 Transcriptional regulator SUPERMAN-like7.0e-5890.15Show/hide
Query:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPN-RPFFIKPSPTFDLLPHHFSPKNNTSPLY
        MAETHQVWRQILKTT  WDQEKAFADDVAAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRAKLQNHPN RPFFIKP+PTFDLL HHFSPKNN S   
Subjt:  MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPN-RPFFIKPSPTFDLLPHHFSPKNNTSPLY

Query:  NPPFSLKKPKLSSSSSSSSNSELLHLDLELKL
         PPFSLKKPKL+SSSSSSSNSE LHLDLELKL
Subjt:  NPPFSLKKPKLSSSSSSSSNSELLHLDLELKL

A0A6J1CVW0 transcriptional regulator SUPERMAN-like1.0e-1659.76Show/hide
Query:  QEKAFADDVAA-------VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNN
        +E+AFA+D AA       VWPPRSYSC+FC R+FRSAQALGGHMNVHRRDRA+L+  PN   F   +PT   LP  FSP ++
Subjt:  QEKAFADDVAA-------VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNN

A0A6J1JCP1 zinc finger protein 10-like9.2e-3462.32Show/hide
Query:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN
        MAETH +WRQIL      K +P W +EKAFA+D  AAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA+LQN+PNR F IKP+PT DL  H F PKN
Subjt:  MAETHQVWRQIL------KTTPCWDQEKAFADD-VAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKN

Query:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL
        + S   +    LK+ K+  S           LDLELKL
Subjt:  NTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLELKL

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.2e-1545.54Show/hide
Query:  QEKAFADDVAA--VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLK----KPKLSSS
        +E AFA+D AA  +WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRA+L+   ++  F K S + +   H  S   + +  Y   F+ K    K + S  
Subjt:  QEKAFADDVAA--VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLK----KPKLSSS

Query:  SSSSSNSELLHL
           SS+S L +L
Subjt:  SSSSSNSELLHL

Q38895 Transcriptional regulator SUPERMAN2.1e-1447.83Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELL
        WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRA+L+   +      PSP +    + +S   N+ P ++ P +L  P LS  SS    + L+
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELL

Q9LHS9 Probable transcriptional regulator RABBIT EARS6.6e-1358.33Show/hide
Query:  QEKAFAD------DVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRP
        +E+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRA+L+     P
Subjt:  QEKAFAD------DVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRP

Q9SLB8 Zinc finger protein 111.6e-1446.94Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLEL
        WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRAKL+  P+  F           PHH +P  N +P +             SSSSSS++   HL+  L
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLEL

Q9SR34 Transcriptional regulator TAC13.2e-0733.85Show/hide
Query:  RSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQN---HPNRPFFIKPSPTFDLL------------------PHHFSPKNNTSPLYNPPFSLKKPKLSSS
        RSY C+FC+R F +AQALGGHMN+HRRDRAKL+      N+   +  S   +++                   H     N+ SP     F +++ KL ++
Subjt:  RSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQN---HPNRPFFIKPSPTFDLL------------------PHHFSPKNNTSPLYNPPFSLKKPKLSSS

Query:  ------------SSSSSNSELLHLDLELKL
                    SSSS + ++  LDLEL+L
Subjt:  ------------SSSSSNSELLHLDLELKL

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 102.2e-1645.54Show/hide
Query:  QEKAFADDVAA--VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLK----KPKLSSS
        +E AFA+D AA  +WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRA+L+   ++  F K S + +   H  S   + +  Y   F+ K    K + S  
Subjt:  QEKAFADDVAA--VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLK----KPKLSSS

Query:  SSSSSNSELLHL
           SS+S L +L
Subjt:  SSSSSNSELLHL

AT2G42410.1 zinc finger protein 111.1e-1546.94Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLEL
        WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRAKL+  P+  F           PHH +P  N +P +             SSSSSS++   HL+  L
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELLHLDLEL

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.5e-1547.83Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELL
        WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRA+L+   +      PSP +    + +S   N+ P ++ P +L  P LS  SS    + L+
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKLSSSSSSSSNSELL

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-1466.04Show/hide
Query:  KAFADDV-----AAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNH
        KAF  D         WPPRSY+CNFC R+FRSAQALGGHMNVHRRDRA  + H
Subjt:  KAFADDV-----AAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNH

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein4.7e-1458.33Show/hide
Query:  QEKAFAD------DVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRP
        +E+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRA+L+     P
Subjt:  QEKAFAD------DVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAACCCATCAAGTATGGAGACAAATCCTGAAAACGACGCCGTGTTGGGATCAAGAGAAGGCGTTCGCCGACGACGTCGCCGCCGTTTGGCCACCGAGATCTTA
CTCTTGCAACTTCTGTATGAGACAATTCCGTTCAGCTCAAGCTTTGGGTGGCCACATGAACGTCCATCGAAGAGACCGTGCAAAGCTTCAAAACCATCCCAACCGTCCAT
TTTTCATCAAACCATCTCCCACCTTTGATCTTCTTCCTCACCATTTTTCTCCCAAAAACAACACTTCCCCACTTTATAATCCTCCCTTCTCTCTCAAAAAACCTAAACTT
TCTTCTTCTTCCTCTTCCTCCTCTAATTCTGAGCTCCTCCACCTCGACCTTGAGCTCAAGCTATAA
mRNA sequenceShow/hide mRNA sequence
CACAAACACAAACACAAAAGAAGTTATCCCTAAAATGGCAGAAACCCATCAAGTATGGAGACAAATCCTGAAAACGACGCCGTGTTGGGATCAAGAGAAGGCGTTCGCCG
ACGACGTCGCCGCCGTTTGGCCACCGAGATCTTACTCTTGCAACTTCTGTATGAGACAATTCCGTTCAGCTCAAGCTTTGGGTGGCCACATGAACGTCCATCGAAGAGAC
CGTGCAAAGCTTCAAAACCATCCCAACCGTCCATTTTTCATCAAACCATCTCCCACCTTTGATCTTCTTCCTCACCATTTTTCTCCCAAAAACAACACTTCCCCACTTTA
TAATCCTCCCTTCTCTCTCAAAAAACCTAAACTTTCTTCTTCTTCCTCTTCCTCCTCTAATTCTGAGCTCCTCCACCTCGACCTTGAGCTCAAGCTATAACTATACCTAC
CCTAACTTAATTTTAACTTTCTCCCTTTGTTTCAAAAATACCCATCTTCTATTTCAAAAGTTACAATATTTCCCTTGACCTTAACCTTTTATACAAATGTTTCAAACTTG
TTCGAAACTTAGACGAAGGATTGTTGGAGAGAGTTGATTTTCATTTTAGGTTAATTGCTTATCAAACTATCCCGATCTAAGTTTTTGTTCACATTCTAATGGATTTTCTA
CTTGGGTGGTGGTTTAGAAATGTTTGTGTAATTAATGTTGGAGATTGATAGTGTAACTTTTGAAATAATATAGATATTTTTGAAACAAATGACAAATTAGTGTAATTTAG
CATTTTTCATTTCTGTGTTTACTTTCTTTGTTGTTGTCGTTTCTTCTTTCATTCATGTCTCTCTTTTTTTAAGTACTGAATATATAATCTAATTGAAAATGTAAAACTTT
ATCTATGG
Protein sequenceShow/hide protein sequence
MAETHQVWRQILKTTPCWDQEKAFADDVAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRAKLQNHPNRPFFIKPSPTFDLLPHHFSPKNNTSPLYNPPFSLKKPKL
SSSSSSSSNSELLHLDLELKL