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Clc07G04680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G04680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
Genome locationClcChr07:5429595..5430178
RNA-Seq ExpressionClc07G04680
SyntenyClc07G04680
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0033925 - mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454829.1 PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase 1 isoform X1 [Cucumis melo]5.6e-0574.36Show/hide
Query:  IEGPPVPTMAANEDRSHHQFL-TIFLLRNGISRSRKRNR
        IEGPP PTMAA   RSH QFL TIFLLRNGISR R++N+
Subjt:  IEGPPVPTMAANEDRSHHQFL-TIFLLRNGISRSRKRNR
TrEMBL top hitse value%identityAlignment
A0A1S3BZH1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase2.7e-0574.36Show/hide
Query:  IEGPPVPTMAANEDRSHHQFL-TIFLLRNGISRSRKRNR
        IEGPP PTMAA   RSH QFL TIFLLRNGISR R++N+
Subjt:  IEGPPVPTMAANEDRSHHQFL-TIFLLRNGISRSRKRNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGGAAGACGAAGGGCAGAATAGAGATGTGGGAGAGTCGGTGGAATTGAAGAAAAGGAGTTTCGCCTTTCATTCCATTGAAGGTCCACCAGTACCAACAATGGC
AGCAAACGAAGACAGAAGTCACCATCAATTCCTCACCATCTTCCTTTTACGAAATGGAATAAGTAGAAGCAGAAAAAGAAATAGAAAAGACGAATCAATTACTCTTTATT
CGCATAATCTGTCTGTCTTTGCTTACTCTGGCTGTTCGAGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAGGAAGACGAAGGGCAGAATAGAGATGTGGGAGAGTCGGTGGAATTGAAGAAAAGGAGTTTCGCCTTTCATTCCATTGAAGGTCCACCAGTACCAACAATGGC
AGCAAACGAAGACAGAAGTCACCATCAATTCCTCACCATCTTCCTTTTACGAAATGGAATAAGTAGAAGCAGAAAAAGAAATAGAAAAGACGAATCAATTACTCTTTATT
CGCATAATCTGTCTGTCTTTGCTTACTCTGGCTGTTCGAGAGAGTGA
Protein sequenceShow/hide protein sequence
MNEEDEGQNRDVGESVELKKRSFAFHSIEGPPVPTMAANEDRSHHQFLTIFLLRNGISRSRKRNRKDESITLYSHNLSVFAYSGCSRE