CuGenDBv2

Gene ID	Clc07G04730
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome location	ClcChr07:5467341..5473861
RNA-Seq Expression	Clc07G04730
Synteny	Clc07G04730
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR018939 - Autophagy-related protein 27

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008454838.1 PREDICTED: uncharacterized protein LOC103495149 isoform X1 [Cucumis melo]

9.1e-57

92.74

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLVPS NISIIDIKNPDRGV VKMSNIGTKVKCSLSVSVICTTDGIQVPQILE+IGPC+YATSLRHPSGCAKI+  H+RGWGFFGTF IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRYFVLKVRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

XP_016901665.1 PREDICTED: uncharacterized protein LOC103495149 isoform X2 [Cucumis melo]

9.1e-57

92.74

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLVPS NISIIDIKNPDRGV VKMSNIGTKVKCSLSVSVICTTDGIQVPQILE+IGPC+YATSLRHPSGCAKI+  H+RGWGFFGTF IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRYFVLKVRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

XP_031741574.1 uncharacterized protein LOC101220308 isoform X1 [Cucumis sativus]

5.5e-54

90.32

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLV + NISIIDIKNPDRGV VKMSNI TKVKCSLSVSVICTTDGIQ PQILE+IGPC+YATSLRHPSGCAKIV  H+RGWGFFGTF IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRYFVLKVRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

XP_031741575.1 uncharacterized protein LOC101220308 isoform X2 [Cucumis sativus]

2.0e-59

64.11

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Query:  LPSLVGSFCCILCLWAEEDLDHILWRCNFA--------SSVL--------------DLFLQTLCC--------------------YDVCTTIGLVPSMNI
        +P L+G FCCILC  A EDLDH+L  C FA        ++V+               + +  L C                    YDVCTTIGLV + NI
Subjt:  LPSLVGSFCCILCLWAEEDLDHILWRCNFA--------SSVL--------------DLFLQTLCC--------------------YDVCTTIGLVPSMNI

Query:  SIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILCLFGGYLLAGIVYRYF
        SIIDIKNPDRGV VKMSNI TKVKCSLSVSVICTTDGIQ PQILE+IGPC+YATSLRHPSGCAKIV  H+RGWGFFGTF IIILCLFGGYLLAGIVYRYF
Subjt:  SIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILCLFGGYLLAGIVYRYF

Query:  VLKVRGVDV
        VLKVRGVDV
Subjt:  VLKVRGVDV

XP_038892376.1 uncharacterized protein LOC120081502 [Benincasa hispida]

5.5e-54

89.52

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCT IGLVPS NISIIDIKNPDRGV VKMS  GTKVKCSLSVSVICTTDGIQVPQILE+IGPCEYATSLRHPSGCAKI+   +RGWGFFGTF+IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRY+VLKVRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQL1 Uncharacterized protein

2.7e-54

90.32

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLV + NISIIDIKNPDRGV VKMSNI TKVKCSLSVSVICTTDGIQ PQILE+IGPC+YATSLRHPSGCAKIV  H+RGWGFFGTF IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRYFVLKVRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

A0A1S3C0Q5 uncharacterized protein LOC103495149 isoform X1

4.4e-57

92.74

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLVPS NISIIDIKNPDRGV VKMSNIGTKVKCSLSVSVICTTDGIQVPQILE+IGPC+YATSLRHPSGCAKI+  H+RGWGFFGTF IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRYFVLKVRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

A0A1S4E105 uncharacterized protein LOC103495149 isoform X2

4.4e-57

92.74

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLVPS NISIIDIKNPDRGV VKMSNIGTKVKCSLSVSVICTTDGIQVPQILE+IGPC+YATSLRHPSGCAKI+  H+RGWGFFGTF IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRYFVLKVRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

A0A6J1H0Z4 uncharacterized protein LOC111458578

4.7e-51

87.1

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLVPS NISIIDIKNP RGV VKMSN GTKVKCSLSVSV CTTDGIQ PQILEQIG CEY TSLRHPSGCAKIV   +RGWGFFGTF+ IILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRY VL VRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

A0A6J1IIX2 uncharacterized protein LOC111477272

8.1e-51

87.1

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCTTIGLVPS NISI+DIKNP RGV VKMSN GTKVKCSLSVSV CTTDGIQ PQ LEQIG CEYATSLRHPSGCAKIV   +RGWGFFGTF+ IILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFGGYLLAGIVYRYFVL VRGVDV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G40316.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

6.3e-32

54.03

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Query:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC
        YDVCT++G   S  + IID ++P +GVIV+MS       CSLSVSVIC    +  P  L + G C+YAT LRHP+GCA  +  H  GWG+F T +IIILC
Subjt:  YDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILC

Query:  LFGGYLLAGIVYRYFVLKVRGVDV
        LFG YL+ G VYRYF L +RG+DV
Subjt:  LFGGYLLAGIVYRYFVLKVRGVDV

AT2G40316.2 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 135 Blast hits to 135 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 63; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

1.8e-26

53.21

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Query:  SIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILCLFGGYLLAGIVYRYF
        ++ D ++P +GVIV+MS       CSLSVSVIC    +  P  L + G C+YAT LRHP+GCA  +  H  GWG+F T +IIILCLFG YL+ G VYRYF
Subjt:  SIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVR-HKRGWGFFGTFMIIILCLFGGYLLAGIVYRYF

Query:  VLKVRGVDV
         L +RG+DV
Subjt:  VLKVRGVDV

Sequences

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CDS sequence

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ATGTCTTGGTTGAGAATTAGTAGAGGAAAGTATTGTGTTATGGGGGTTAACTATGGCGAGGAGAAACTTAGTCGTTGGGCCGAGATGGTGAGGTGTGATGCTGGCAGTCT
CCCCTTTTCTTACCTTGGTCTCCCTTTCGGGAGCATCCCTAATTCGGTTTCCTTATGGGATTCGGGGGTGGATAAGGGGGGGCTTGGAATTGGGAATCTTGGAGTGCGAA
ATAAAGCTTTGTTAGCCAAATGGCTGTGGTGCTTTTCTTCTGAGCCCAACTCTTTGTGGTGCAAGATCATTGCTAGTAAGCACAGTGCCCATCCTTTTGAGTGGTTGTCC
AAGGGGGTTAAGGGCATGTATCGGAATTTGTGGAAAGATATTTTGAAAGAGCTCCCATTTTTTGTTCCTTTGGGAGGCGACAGAGGTGGCTGCTCTTTTGTTGTTACTCA
ATGGTCACCCCTTAAGATTAGGGAGAAGGAATGTTCATGTTTGGAGCCCCAATCCTTTGGAAGGGTTTTCTTGCAAGTTCTTCATGGCCATGCTAACACGTTGGATAGGC
TTGCGAGGAAGTTGCCTTCACTTGTTGGGTCGTTCTGTTGTATTCTTTGTCTGTGGGCGGAGGAAGACCTGGACCATATTCTCTGGCGTTGTAACTTTGCGAGTTCTGTT
TTGGATTTATTCCTTCAAACGTTATGCTGCTATGATGTATGCACAACCATTGGTCTTGTACCAAGCATGAACATTAGCATCATTGATATAAAAAATCCTGACAGAGGTGT
CATTGTTAAGATGTCTAACATTGGCACTAAGGTCAAGTGCTCACTTTCCGTGTCTGTAATTTGTACGACAGATGGTATTCAGGTGCCACAAATTTTGGAACAGATAGGGC
CCTGTGAGTATGCTACATCCTTGAGGCACCCTTCTGGTTGTGCAAAGATTGTACGTCATAAAAGAGGCTGGGGCTTCTTTGGGACCTTTATGATCATCATTTTATGCCTT
TTCGGAGGATATCTTTTGGCTGGGATAGTCTATCGGTATTTTGTTCTCAAAGTTCGGGGTGTTGATGTACGTATCCTTATCCTATTTAATAAAATAGCTGCAATGATTTG
TCCCGTAGACTATTAA

mRNA sequence

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Protein sequence

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MSWLRISRGKYCVMGVNYGEEKLSRWAEMVRCDAGSLPFSYLGLPFGSIPNSVSLWDSGVDKGGLGIGNLGVRNKALLAKWLWCFSSEPNSLWCKIIASKHSAHPFEWLS
KGVKGMYRNLWKDILKELPFFVPLGGDRGGCSFVVTQWSPLKIREKECSCLEPQSFGRVFLQVLHGHANTLDRLARKLPSLVGSFCCILCLWAEEDLDHILWRCNFASSV
LDLFLQTLCCYDVCTTIGLVPSMNISIIDIKNPDRGVIVKMSNIGTKVKCSLSVSVICTTDGIQVPQILEQIGPCEYATSLRHPSGCAKIVRHKRGWGFFGTFMIIILCL
FGGYLLAGIVYRYFVLKVRGVDVRILILFNKIAAMICPVDY

Clc07G04730 (gene) of Watermelon (cordophanus) v2 genome