; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G04870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G04870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:5723092..5726073
RNA-Seq ExpressionClc07G04870
SyntenyClc07G04870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600897.1 hypothetical protein SDJN03_06130, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6081.76Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        MAKSLPS T LQQFAK+ V SKKPQSA   PKSRIRVSP ETPIP  VRVISEP KKKNM  EEKNR PLADVVSDCVKRWFQDTLKEA AGD AMQVLV
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        GQMFCSGYGVPKDT+KGLAWINR SK Q    +VSDRHPGYLATDSE S+RRVK+DD+R
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

XP_004146456.1 uncharacterized protein LOC101213931 isoform X2 [Cucumis sativus]3.4e-6181.13Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        MAKSLPSP R QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVISEP K K M EEEKNRTPLADVVSDCVKRWFQDTLKEA+AGDT+MQVLV
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        GQMFCSGYGVPK+T+KGLAWI R SK Q   WK SDRHPGYLATDSESSDRRVKRD+VR
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

XP_022957582.1 uncharacterized protein LOC111458931 [Cucurbita moschata]2.9e-6081.76Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        MAKSLPS T LQQFAK+ V SKKPQSA   PKSRIRVSP ETPIP  VRVISEP KKKNM  EEKNR PLADVVSDCVKRWFQDTLKEA AGD AMQVLV
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        GQMFCSGYGVPKDT+KGLAWINR SK Q    +VSDRHPGYLATDSE S+RRVK+DD+R
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

XP_023552657.1 uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo]1.7e-6081.25Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEP-KKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVL
        MAKSLP  +RLQQFAKVVVSSKKPQS T+  K +IRVSPPETPI  +VRVISEP + KKNM  E KNR PLADVVSDC KRWFQDTLKEA AGDTAMQVL
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEP-KKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVL

Query:  VGQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        VGQMFCSGYGVPKDT+KGLAWINR SK Q   WK SDRHP YLATDSESSDRRVKRDD+R
Subjt:  VGQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

XP_038892993.1 uncharacterized protein LOC120081889 [Benincasa hispida]2.0e-6986.96Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEK----NRTPLADVVSDCVKRWFQDTLKEARAGDTAM
        MAKSLPSPTRL QFAKVVV+SKKPQSAT NPKSRIRVSPPETPI G VRVISE KK  N  EEEK    +RTPLADVVSDCVKRWFQDTLKEARAGDT+M
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEK----NRTPLADVVSDCVKRWFQDTLKEARAGDTAM

Query:  QVLVGQMFCSGYGVPKDTQKGLAWINRGSKSQPWKVSDRHPGYLATDSESSDRRVKRDDVR
        QVLVGQMFCSGYGVPKDTQKG+AWINR SK+Q WKVSDRHPGYLATDSESSDRRVK+DDVR
Subjt:  QVLVGQMFCSGYGVPKDTQKGLAWINRGSKSQPWKVSDRHPGYLATDSESSDRRVKRDDVR

TrEMBL top hitse value%identityAlignment
A0A0A0KM25 Uncharacterized protein1.6e-6181.13Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        MAKSLPSP R QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVISEP K K M EEEKNRTPLADVVSDCVKRWFQDTLKEA+AGDT+MQVLV
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        GQMFCSGYGVPK+T+KGLAWI R SK Q   WK SDRHPGYLATDSESSDRRVKRD+VR
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

A0A1S3C493 uncharacterized protein LOC1034967136.9e-6078.62Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        MAKSLPSPTR QQFAK+V SSK PQS     KSRIR SP ETPI G+VRVI EP K K M E+EKNRTPL+DVVSDCVKRWFQDTLKEA+AGDT+MQVLV
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        GQMFCSGYGVPK+T+KGLAWI R SK QP  WK S+RHPGYLATDSESS+RRVKR+D R
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

A0A6J1FNN7 uncharacterized protein LOC1114471032.4e-6080.62Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEP-KKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVL
        MAKS P  +RLQQFAKVVVSSKKPQS T+  K +IRVSPPETPI  +VRVISEP + KKNM  E KNR PLADVVSDC KRWFQDTLKEA AGDTAMQVL
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEP-KKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVL

Query:  VGQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        VGQMFCSGYGVPKDT+KGLAWINR SK Q   WK SDRHP YLATDSESSDRRVKRDD+R
Subjt:  VGQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

A0A6J1GZI5 uncharacterized protein LOC1114589311.4e-6081.76Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        MAKSLPS T LQQFAK+ V SKKPQSA   PKSRIRVSP ETPIP  VRVISEP KKKNM  EEKNR PLADVVSDCVKRWFQDTLKEA AGD AMQVLV
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        GQMFCSGYGVPKDT+KGLAWINR SK Q    +VSDRHPGYLATDSE S+RRVK+DD+R
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

A0A6J1JUC7 uncharacterized protein LOC1114884391.2e-5980.5Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        MAKSLPS + LQQFAK+ V SKKPQSA   PKSRIRVSP ETPIP  VRVISEP KKKNM  EE+NR PLADVVSDCVKRWFQDTLKEA AGD AMQVLV
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR
        GQMFCSGYGVPKDT+KGLAWINR SK Q    +VSDRHPGYLATDSE S+RRVK+DD+R
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGSKSQP--WKVSDRHPGYLATDSESSDRRVKRDDVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)1.6e-2442.57Show/hide
Query:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV
        M KS+P  T L             + A++     I+ S P  PI        +       +E  +   PL+ VVSDC KRWF+DTL+EA+AG+  MQVL+
Subjt:  MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLV

Query:  GQMFCSGYGVPKDTQKGLAWINRGS--KSQPWKVSDRHPGYLATDSES
        GQM+ SGYGVPKD +KG  WI + S  +S  WKV D+ PGY A+DS+S
Subjt:  GQMFCSGYGVPKDTQKGLAWINRGS--KSQPWKVSDRHPGYLATDSES

AT5G05360.1 unknown protein6.6e-3166.67Show/hide
Query:  NRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAWINRGS--KSQPWKVSDRHPGYLATDSESSDRR
        NR PLA VV DCV+RWFQDTLKEA++GD  MQVLVGQM+CSGYG+PKD  KG AWIN+ S  +S  W+VSD+ PGY A+DS+S+D++
Subjt:  NRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAWINRGS--KSQPWKVSDRHPGYLATDSESSDRR

AT5G05360.2 unknown protein7.6e-2769.33Show/hide
Query:  NRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAWINRGS--KSQPWKVSDRHPG
        NR PLA VV DCV+RWFQDTLKEA++GD  MQVLVGQM+CSGYG+PKD  KG AWIN+ S  +S  W+VSD+ PG
Subjt:  NRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGVPKDTQKGLAWINRGS--KSQPWKVSDRHPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATCGCTTCCATCGCCGACTCGCCTTCAGCAATTCGCCAAGGTCGTCGTCTCCTCCAAGAAGCCTCAATCAGCCACATCTAACCCCAAGTCTCGGATCCGCGT
TTCGCCGCCCGAAACTCCGATACCGGGTGCCGTCCGAGTCATCTCGGAGCCGAAGAAGAAGAAAAACATGGCGGAGGAGGAGAAGAATCGGACTCCATTAGCCGATGTGG
TTTCGGATTGCGTCAAGCGGTGGTTTCAGGACACGCTCAAGGAGGCCAGAGCCGGCGATACGGCTATGCAGGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTT
CCTAAGGACACTCAGAAGGGACTTGCTTGGATCAATAGAGGTTCAAAAAGTCAGCCTTGGAAAGTAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAG
CGATAGGAGAGTGAAACGAGATGATGTCAGATAA
mRNA sequenceShow/hide mRNA sequence
TTTGTCTTATAATTTAGGTAAAAGAAAAAAGAAATAAGAAAATGAAAAAGAGAAAGAAAGAGATTGAAATAGGTATATCTCCCACCTCACCCAAACCTTAGTCTAAATCG
AAGAGAAAAACAAGTCTGCCATTGGCAGAGGCCAAAACTGGGCAGTTTCAATTCTCTCAAAACCCCTTTTGTTGTTTGATGGCAAAATCGCTTCCATCGCCGACTCGCCT
TCAGCAATTCGCCAAGGTCGTCGTCTCCTCCAAGAAGCCTCAATCAGCCACATCTAACCCCAAGTCTCGGATCCGCGTTTCGCCGCCCGAAACTCCGATACCGGGTGCCG
TCCGAGTCATCTCGGAGCCGAAGAAGAAGAAAAACATGGCGGAGGAGGAGAAGAATCGGACTCCATTAGCCGATGTGGTTTCGGATTGCGTCAAGCGGTGGTTTCAGGAC
ACGCTCAAGGAGGCCAGAGCCGGCGATACGGCTATGCAGGTCTTGGTTGGCCAGATGTTTTGCTCCGGCTATGGAGTTCCTAAGGACACTCAGAAGGGACTTGCTTGGAT
CAATAGAGGTTCAAAAAGTCAGCCTTGGAAAGTAAGCGATAGACATCCAGGTTATCTTGCAACCGATTCAGAATCAAGCGATAGGAGAGTGAAACGAGATGATGTCAGAT
AATCCTTTTCACTAAACTTATTACAAATTTACAAGCAATGTTGAAGATGATAAATACTAAAAGAAGAGACCTTGTTTGGGTTGGTTTTGGGTTCCTCTTCTGCTTCTCCT
TGGTTGACATGAAACGGAACTTCGTGTATAAATTATAAAGTGTTGTGTGTTGAAGCAGGACAGTAGCCACTATTTCCCTTCACGCTTTCCCTTTCTCCATTCCCATGGCT
GCTCTGGGTTTGAAGAAGCCCACAACCCAGCCCTTTTAGCTCGAGCCTCATTTTCCCACTGTTATGAATAATGAAATGTATAAGGTGTCCCACAGCAGATGTCACAGGGT
TAAAGCAAAAAGGTTCTTGTTGAGAAATCTGTGTGGGTGTATGTTAAACCCATATTTAGGAGCTCACTCTAAATTTGGCCTCACTTTAAAAACTCAAAATTTGGCCTTTT
ACTGATGTCATCACGCAGTGAATTTACCACTTTAACCCTTCTTCCTTCTACCTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MAKSLPSPTRLQQFAKVVVSSKKPQSATSNPKSRIRVSPPETPIPGAVRVISEPKKKKNMAEEEKNRTPLADVVSDCVKRWFQDTLKEARAGDTAMQVLVGQMFCSGYGV
PKDTQKGLAWINRGSKSQPWKVSDRHPGYLATDSESSDRRVKRDDVR