CuGenDBv2

Gene ID	Clc07G05263
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Genome location	ClcChr07:6638627..6639213
RNA-Seq Expression	Clc07G05263
Synteny	Clc07G05263
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR004497 - NADH-plastoquinone oxidoreductase, subunit I IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAF7015754.1 hypothetical protein CFC21_029517, partial [Triticum aestivum]

4.8e-33

51.09

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Query:  QYVSYGNWVHELWLTNST-------------------------------SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNI
        +YV YGNWVHELW TN+T                               + +R R RIHFEFD CIACEV  RV PI+LP VDW+ E DI++KQLLNY+I
Subjt:  QYVSYGNWVHELWLTNST-------------------------------SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNI

Query:  DFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH
        DF +CIFCG+C+EY+PT+CLSM +EY+LS +D  +L+
Subjt:  DFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH

XP_028052110.1 uncharacterized protein LOC114256654 [Camellia sinensis]

8.3e-33

57.02

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EYYP
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

XP_028052111.1 uncharacterized protein LOC114256655 [Camellia sinensis]

9.1e-32

56.2

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EY P
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

XP_028070302.1 LOW QUALITY PROTEIN: uncharacterized protein LOC114272797 [Camellia sinensis]

8.3e-33

57.02

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EYYP
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

XP_028084937.1 receptor-like protein 33 [Camellia sinensis]

8.3e-33

57.02

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EYYP
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

TrEMBL top hits

e value

%identity

Alignment

A0A075TQ68 NADH-quinone oxidoreductase subunit I

4.4e-32

56.2

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EY P
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

A0A221HS31 NADH-quinone oxidoreductase subunit I

4.4e-32

56.2

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EY P
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

A0A288R5Z1 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

4.4e-32

56.2

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EY P
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

A0A288R8S6 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

4.4e-32

56.2

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EY P
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

T1WY72 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

4.4e-32

56.2

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Query:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP
        + IG+  +  +S+ N       + +E W+T+    +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+C+EY P
Subjt:  KLIGKEILQYVSYGN-------WVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYP

Query:  TNCLSMMKEYKLSPHDPRQLH
        TNCLSM +EY+LS +D  +L+
Subjt:  TNCLSMMKEYKLSPHDPRQLH

SwissProt top hits

e value

%identity

Alignment

A0A389 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

1.3e-33

73.26

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Query:  KRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH
        +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KKQLLNY+IDFGVCIFCG+C+EY PTNCLSM +EY+LS +D  +L+
Subjt:  KRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH

A4GGF0 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

1.7e-33

71.59

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Query:  SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH
        S +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KK+LLNY+IDFG+CIFCG+CIEY PTNCLSM +EY+LS +D  +L+
Subjt:  SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH

Q09WW4 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

1.7e-33

70.45

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Query:  SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH
        + +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KKQLLNY+IDFG+CIFCG+C+EY PTNCLSM +EY+LS +D  +L+
Subjt:  SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH

Q0ZIW4 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

1.7e-33

72.09

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Query:  KRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH
        +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KKQLLNY+IDFG+CIFCG+C+EY PTNCLSM +EY+LS +D  +L+
Subjt:  KRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH

Q2PMN6 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic

7.8e-34

72.73

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Query:  SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH
        S +R R RIHFEFD CIACEV  RV PI+LP VDWKLETDI+KKQLLNY+IDFG+CIFCG+CIEY PTNCLSM +EY+LS +D  +L+
Subjt:  SCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH

Arabidopsis top hits

e value

%identity

Alignment

ATCG01090.1 NADPH dehydrogenases

4.0e-33

68.6

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Query:  KRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH
        +R R RIHFEFD CIACEV  RV PI+LP VDWKLET+I+KK+LLNY+IDFG+CIFCG+C+EY PTNCLSM +EY+ S +D  +L+
Subjt:  KRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHDPRQLH

Sequences

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CDS sequence

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ATGAAACTTATTGGAAAAGAGATATTACAATATGTTTCCTATGGTAACTGGGTTCATGAATTATGGTTAACAAACAGTACTAGCTGTAAGCGTTGCCGTAATCGAATCCA
TTTTGAATTTGATACATGCATTGCTTGTGAGGTACGTTTTCGTGTATGGCCTATAAATCTCCCCTTTGTTGATTGGAAATTGGAAACTGATATTCAAAAGAAACAATTGC
TTAATTACAATATTGATTTCGGGGTTTGTATATTTTGTGGTGATTGCATTGAATATTATCCAACAAATTGTTTATCAATGATGAAAGAATATAAACTTTCTCCTCATGAT
CCACGACAATTGCATTGA

mRNA sequence

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Protein sequence

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MKLIGKEILQYVSYGNWVHELWLTNSTSCKRCRNRIHFEFDTCIACEVRFRVWPINLPFVDWKLETDIQKKQLLNYNIDFGVCIFCGDCIEYYPTNCLSMMKEYKLSPHD
PRQLH

Clc07G05263 (gene) of Watermelon (cordophanus) v2 genome