CuGenDBv2

Gene ID	Clc07G05340
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Genome location	ClcChr07:6925940..6933134
RNA-Seq Expression	Clc07G05340
Synteny	Clc07G05340
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8648167.1 hypothetical protein Csa_018435 [Cucumis sativus]

6.7e-16

84.44

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DSHCYSKDDDLGLH+LFP+E+Q+WSFKGNWI TT FHCRLEWE G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

KAE8648169.1 hypothetical protein Csa_018483, partial [Cucumis sativus]

5.7e-15

84.44

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DS CYSKDD+ GLHVLFP+EQQNWSFKGNW DTT FHCRLEWE G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

KAE8648173.1 hypothetical protein Csa_018428 [Cucumis sativus]

5.7e-15

84.44

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DS CYSKDD+ GLHVLFP+EQQNWSFKGNW DTT FHCRLEWE G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

XP_008453055.1 PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]

6.3e-14

73.33

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DSHCYSKDDDLG  VL+PN++Q+WSF+GNW+ TT+FHC+LEWE G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

XP_022933678.1 S-protein homolog 2-like [Cucurbita moschata]

6.9e-13

71.11

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        D+HC SKDDDLGLH+LFP+E+Q+WSF  NW+ TT+FHCRLEW+ G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIQ4 S-protein homolog

2.7e-15

84.44

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DS CYSKDD+ GLHVLFP+EQQNWSFKGNW DTT FHCRLEWE G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

A0A0A0KL79 S-protein homolog

3.2e-16

84.44

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DSHCYSKDDDLGLH+LFP+E+Q+WSFKGNWI TT FHCRLEWE G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

A0A1S3BUQ9 S-protein homolog

3.0e-14

73.33

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DSHCYSKDDDLG  VL+PN++Q+WSF+GNW+ TT+FHC+LEWE G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

A0A6J1F5H5 S-protein homolog

3.4e-13

71.11

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        D+HC SKDDDLGLH+LFP+E+Q+WSF  NW+ TT+FHCRLEW+ G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

A0A6J1FMU2 S-protein homolog

3.1e-11

62.22

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Query:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG
        DSHC SKDDDLG+ V++P+++Q WSF+GNW+ +T+FHC+LEW  G
Subjt:  DSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEG

SwissProt top hits

e value

%identity

Alignment

Q9FMQ4 S-protein homolog 3

8.0e-04

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Query:  HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEW
        HC S DDDLGL +L PN   ++ F+ + + TT F+C   W
Subjt:  HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEW

Arabidopsis top hits

e value

%identity

Alignment

AT1G04645.1 Plant self-incompatibility protein S1 family

1.7e-04

36.92

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Query:  GFPTMLLATYGFPTMLPGGDS---HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWE
        G P    AT    T L GG     HC SK DDLG+HV+   ++ ++ F+ N   +T F C  +W+
Subjt:  GFPTMLLATYGFPTMLPGGDS---HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWE

AT5G04350.1 Plant self-incompatibility protein S1 family

8.2e-04

43.59

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Query:  HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLE
        HC SKDDDLG H+L   +   ++F  N   TT F C+++
Subjt:  HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLE

AT5G12060.1 Plant self-incompatibility protein S1 family

5.7e-05

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Query:  HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEW
        HC S DDDLGL +L PN   ++ F+ + + TT F+C   W
Subjt:  HCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEW

Sequences

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CDS sequence

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ATGTCACTTCCTCAAACTGATAGTTCTGCCACAGAACTTTTACTAGCGCTATTTCACGATTGCGTAAGGCCTTTACTTCCCTTGCGAGAATTTGGACAAACTTGTCTTCA
TAACTCAAATTCTTATTCAATTGCAATGGCTCATAGTCAACTACGTGAGCGGTTCGACTCTAAGCCGTGGAAAGAGTCAAAGACTTTTAGTGAAGTACCCAAGAGGAACT
TGGGAAGTGGACGTAGAAGCCAACAAGTTTCCTACTACGTACTGAAAGGTGGCGAATTTCCTACTATGATACTAGAAACCGACGAGTTTCCTATTACGTTACTGGAAGCC
TACGAATTTCCTACTATGTTACCAGAAGCTTACGGGTTTCCTACTATGTTATTGGCGACCTACGGCTTTCCTACCATGTTACCGGGTGGCGACAGCCATTGCTACTCCAA
AGACGATGATTTAGGATTGCATGTGTTGTTCCCAAATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGATTGACACAACAGATTTCCATTGTAGGTTGGAATGGGAAG
AAGGCGAAACTAGAACAAAGAAGCCAAAGAAGGTTCTGGAGGAGGAAGGGGGCTGGGAGAAGCCTACATCCAATTGGAATATCAAGCAGTCTTGGGGCAATGACAACATG
GAAGAGGAGCTTGGGGTAAATCCAATTCTGCAGAAGACGGGAAGTTATCTTTTGGTTGGGGTCGCTGATGAATGA

mRNA sequence

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Protein sequence

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MSLPQTDSSATELLLALFHDCVRPLLPLREFGQTCLHNSNSYSIAMAHSQLRERFDSKPWKESKTFSEVPKRNLGSGRRSQQVSYYVLKGGEFPTMILETDEFPITLLEA
YEFPTMLPEAYGFPTMLLATYGFPTMLPGGDSHCYSKDDDLGLHVLFPNEQQNWSFKGNWIDTTDFHCRLEWEEGETRTKKPKKVLEEEGGWEKPTSNWNIKQSWGNDNM
EEELGVNPILQKTGSYLLVGVADE

Clc07G05340 (gene) of Watermelon (cordophanus) v2 genome