; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G05590 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G05590
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr07:7671543..7672397
RNA-Seq ExpressionClc07G05590
SyntenyClc07G05590
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648168.1 hypothetical protein Csa_018354 [Cucumis sativus]3.4e-3972.73Show/hide
Query:  LDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRWKMLRMP
        +D HCWSKDN+LGL ILLP E+Q W FR NF GTTLFHCRLEWERGF+EFDAF VDE F+N+FCPN  CVW+AKQDGLYM+N AGQ V  + WK+LR+P
Subjt:  LDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRWKMLRMP

KAE8648174.1 hypothetical protein Csa_018375 [Cucumis sativus]6.7e-3575.58Show/hide
Query:  LDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQ
        +D HCWSKD++LGL ILLP E+Q W FR NF GTTLFHCRLEWERGF+EFDAF VDE F+N+FCPN  CVW+A+QDGLYM+NGAGQ
Subjt:  LDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQ

KAG6600849.1 S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia]5.3e-4868.55Show/hide
Query:  RQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQ
        +Q  RSL+ IPK+ VEIRN +KMYILD+HC+SKD++LGL+IL P ++Q WSFR+NFWG TLFHCRLEWERGFKEFDAF VDE F +E+C N RC+W+AKQ
Subjt:  RQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQ

Query:  DGLYMVNGAGQHVLKYRWKMLRMP
        DG+YM+N AGQ V  +RWK+LR+P
Subjt:  DGLYMVNGAGQHVLKYRWKMLRMP

KAG7031483.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-5163.82Show/hide
Query:  MHQLVLLSLGLLLIAFQPMVGSA----VRQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGF
        M +LVLL LGLLL+   P  G++     +Q  RSL+ IPK+ VEIRN +KMYILD+HC+SKD++LGL+IL P ++Q WSFR+NFWG TLFHCRLEWERGF
Subjt:  MHQLVLLSLGLLLIAFQPMVGSA----VRQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGF

Query:  KEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRWKMLRMP
        KEFDAF VDE F +E+C N RC+W+AKQDG+YM+N AGQ V  +RWK+LR+P
Subjt:  KEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRWKMLRMP

XP_023546939.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]1.5e-4768.55Show/hide
Query:  RQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQ
        +Q  RSLI IPK+RVEIRN ++MYILD+HC+SKD++LGL+IL P ++Q WSFR+N WG TLFHCRLEWERGFKEFDAF VDE F +E+C N RC+W+AKQ
Subjt:  RQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQ

Query:  DGLYMVNGAGQHVLKYRWKMLRMP
        DG+YM+N AGQ V  +RWK+LR+P
Subjt:  DGLYMVNGAGQHVLKYRWKMLRMP

TrEMBL top hitse value%identityAlignment
A0A0A0KL79 S-protein homolog7.4e-3250Show/hide
Query:  PNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDG
        PN  +++  ++ VEI N ++M+ILD+HC+SKD++LGL+IL P EKQ WSF+ N+  TT FHCRLEWE G+ EFD+F     F+  +C N+ C+W A+QDG
Subjt:  PNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDG

Query:  LYMVNGAGQHVLKYRWKMLR
        +Y+ N AG+ V    W+M+R
Subjt:  LYMVNGAGQHVLKYRWKMLR

A0A0A0KSN2 S-protein homolog2.8e-3146.9Show/hide
Query:  HQLVLLSLGLLLIAFQPMVGSAVRQPNRSLIV-IPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFD
        H LVLL    L++ F   +      P +S I+ +  Y++EI N ++MY+LD+HC+SKDN+LGL+IL PGE Q WSF++N + TT F C LEWE G  EFD
Subjt:  HQLVLLSLGLLLIAFQPMVGSAVRQPNRSLIV-IPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFD

Query:  AFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRWKML
        +F  +  F+N FC N  C W A+QDG+Y+ N  G++V +  W ML
Subjt:  AFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRWKML

A0A1S3BUQ9 S-protein homolog1.3e-3146.83Show/hide
Query:  GSAVRQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVW
        G  + +P+  L+   K+ + I N ++MY+LD+HC+SKD++LG  +L P ++Q WSFR N+ GTT FHC+LEWE G+ EFDAF  D  F+  FC    C W
Subjt:  GSAVRQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVW

Query:  LAKQDGLYMVNGAGQHVLKYRWKMLR
         A+QDG+Y+ N  GQ V    W+M+R
Subjt:  LAKQDGLYMVNGAGQHVLKYRWKMLR

A0A1S3BVC0 S-protein homolog2.6e-2954.55Show/hide
Query:  SLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYM
        S+I +  Y+V+I N ++MY+LD+HC+SKDN+LGL+IL PGE+Q WSF +N + TT F CRLEWE G  EFD+F  D  F+N FC N  C W AKQDG+Y+
Subjt:  SLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYM

Query:  VNGAGQHVLK
         N    H +K
Subjt:  VNGAGQHVLK

A0A6J1FMU2 S-protein homolog8.2e-3150.42Show/hide
Query:  PNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDG
        PN+  I + K+ V IRN ++MY+LD+HC SKD++LG+ ++ P ++Q WSFR N+ G+T FHC+LEW  GF EFDAF  D  F+  FC +  CVW AKQDG
Subjt:  PNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDG

Query:  LYMVNGAGQHVLKYRWKML
        LY+ +  GQ V K  W+++
Subjt:  LYMVNGAGQHVLKYRWKML

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.2e-0831.54Show/hide
Query:  LSLGLLLIAFQPMVGSA-----VRQPN-----RSLIVIPKYRVEIRNVM-KMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERG
        LSL +L+I     +  A     +  PN      S+    K  VEI N +     L  HC SKD++LG   L PGE   +SF   F+G TL+ C   W   
Subjt:  LSLGLLLIAFQPMVGSA-----VRQPN-----RSLIVIPKYRVEIRNVM-KMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERG

Query:  FKEFDAFIVD-ETFMNEFCPNKRCVWLAKQDGLYMVNG-AGQHVLKYRW
           FD +    ++  +  C + RCVW  +++G    N    Q  L Y W
Subjt:  FKEFDAFIVD-ETFMNEFCPNKRCVWLAKQDGLYMVNG-AGQHVLKYRW

F4JLS0 S-protein homolog 15.0e-0932.2Show/hide
Query:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL
        I++PK   ++V + N +     L  HC SK+++LG   L    +  W+F  N   +T F C +  + G    + F  D+  +   C  K C+W AK DGL
Subjt:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL

Query:  YMVNGA-GQHVLKYRWKM
        Y+ N A G+ VL  +W++
Subjt:  YMVNGA-GQHVLKYRWKM

Q2HQ46 S-protein homolog 741.6e-1036.75Show/hide
Query:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL
        IV+PK   ++V + N +     L  HC SK+N+LG   L   ++  W+F  N   +TLF C +  + G      F  D+  +   C  K CVW AK DGL
Subjt:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL

Query:  YMVNGA-GQHVLKYRWK
        Y+ N A G+ VL  +WK
Subjt:  YMVNGA-GQHVLKYRWK

Q3E9W6 S-protein homolog 202.7e-1040Show/hide
Query:  LDTHCWSKDNNLGLNILLPGEKQHWSFRN--NFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNG
        L  HC SKD +LG   L P  +QHW FR   +FWG TLF C  EWE   K FD  +         C    CVW  +  G   + G
Subjt:  LDTHCWSKDNNLGLNILLPGEKQHWSFRN--NFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNG

Q9LW22 S-protein homolog 211.9e-0832.98Show/hide
Query:  ILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRW
        IL  HC SK+N++G+  L  GE   +SF+ NFWGTT F C L     +K +      +             WLA+ DG+Y    +     K  W
Subjt:  ILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRW

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family1.3e-0932.98Show/hide
Query:  ILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRW
        IL  HC SK+N++G+  L  GE   +SF+ NFWGTT F C L     +K +      +             WLA+ DG+Y    +     K  W
Subjt:  ILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRW

AT4G16295.1 S-protein homologue 13.6e-1032.2Show/hide
Query:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL
        I++PK   ++V + N +     L  HC SK+++LG   L    +  W+F  N   +T F C +  + G    + F  D+  +   C  K C+W AK DGL
Subjt:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL

Query:  YMVNGA-GQHVLKYRWKM
        Y+ N A G+ VL  +W++
Subjt:  YMVNGA-GQHVLKYRWKM

AT4G24975.1 Plant self-incompatibility protein S1 family1.9e-1140Show/hide
Query:  LDTHCWSKDNNLGLNILLPGEKQHWSFRN--NFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNG
        L  HC SKD +LG   L P  +QHW FR   +FWG TLF C  EWE   K FD  +         C    CVW  +  G   + G
Subjt:  LDTHCWSKDNNLGLNILLPGEKQHWSFRN--NFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNG

AT4G29035.1 Plant self-incompatibility protein S1 family1.1e-1136.75Show/hide
Query:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL
        IV+PK   ++V + N +     L  HC SK+N+LG   L   ++  W+F  N   +TLF C +  + G      F  D+  +   C  K CVW AK DGL
Subjt:  IVIPK---YRVEIRNVMKM-YILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGL

Query:  YMVNGA-GQHVLKYRWK
        Y+ N A G+ VL  +WK
Subjt:  YMVNGA-GQHVLKYRWK

AT5G04350.1 Plant self-incompatibility protein S1 family1.6e-1032.26Show/hide
Query:  ILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYR
        +L  HC SKD++LG +IL  G+   ++F +N W TT F C+++    FK    F+  ET  ++      C W+ ++DG+Y          KY+
Subjt:  ILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVDETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCAACTCGTACTATTATCGTTAGGTCTCTTACTTATCGCATTCCAACCAATGGTTGGAAGTGCAGTAAGACAACCAAACAGATCTCTTATTGTTATACCG
AAATATCGTGTAGAAATTCGCAACGTGATGAAAATGTATATATTGGATACTCATTGTTGGTCGAAAGACAACAATTTAGGGTTAAATATACTTCTTCCAGGTGAA
AAACAACACTGGTCATTCAGAAACAATTTTTGGGGAACAACCTTATTCCATTGCAGATTGGAATGGGAAAGAGGGTTTAAGGAGTTTGATGCATTTATTGTTGAT
GAAACTTTCATGAATGAGTTCTGTCCCAACAAACGATGTGTTTGGTTAGCCAAACAAGATGGACTTTATATGGTGAATGGAGCTGGTCAACATGTTCTTAAGTAT
CGCTGGAAAATGCTTCGAATGCCCTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTAGAGATCGAGAGGGCAATTAAAGCACTTTACCGCTTTAAATTTCTTTTCCAAGCAAAAATTAATTTCCATGCATCAACTCGTACTATTATCGTTAGGTCT
CTTACTTATCGCATTCCAACCAATGGTTGGAAGTGCAGTAAGACAACCAAACAGATCTCTTATTGTTATACCGAAATATCGTGTAGAAATTCGCAACGTGATGAA
AATGTATATATTGGATACTCATTGTTGGTCGAAAGACAACAATTTAGGGTTAAATATACTTCTTCCAGGTGAAAAACAACACTGGTCATTCAGAAACAATTTTTG
GGGAACAACCTTATTCCATTGCAGATTGGAATGGGAAAGAGGGTTTAAGGAGTTTGATGCATTTATTGTTGATGAAACTTTCATGAATGAGTTCTGTCCCAACAA
ACGATGTGTTTGGTTAGCCAAACAAGATGGACTTTATATGGTGAATGGAGCTGGTCAACATGTTCTTAAGTATCGCTGGAAAATGCTTCGAATGCCCTAATTTAA
AGAGGGTAATTTGGCTTATTGGTGTATGTATCAAATTTTAATTTATTAATTATTCATCTTATGAAACTTACCACTTTATTTTCCTAAAAAACCTACGTTGCAAAA
AAGAAATCCATTTGAGAACTACTCCTACTCAATATCTGATGACAACAACTTACTTGAATTCAAGCCAACTTCAAATTCTCTGTCAATACTTGTCATGGAAAGCAA
TTTCAAGCATCCAATCATTTGTGGAGTATGCGTTTACAAACCTTCCAACTCTAGTTTGCAAAAGAAATAATCCAACTCTAAGATTTTCTCTAATGGACCAACAAA
TAAAGCAATTTCGGC
Protein sequenceShow/hide protein sequence
MHQLVLLSLGLLLIAFQPMVGSAVRQPNRSLIVIPKYRVEIRNVMKMYILDTHCWSKDNNLGLNILLPGEKQHWSFRNNFWGTTLFHCRLEWERGFKEFDAFIVD
ETFMNEFCPNKRCVWLAKQDGLYMVNGAGQHVLKYRWKMLRMP