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Clc07G05595 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G05595
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr07:7773905..7774387
RNA-Seq ExpressionClc07G05595
SyntenyClc07G05595
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648167.1 hypothetical protein Csa_018435 [Cucumis sativus]5.1e-5768.12Show/hide
Query:  MALKRLMLLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDF
        MAL RL LLL++LL+  L TSMAK+K   KNK+  PKL  PN+P+V FE+F VEIHN+L M++LDSHCYSKD+DLGLH+LFP+E+Q+WSFKGNW+ TT F
Subjt:  MALKRLMLLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDF

Query:  HCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR
        HCRLEWE G LEFDSF S PDFV N C N+TCIWSARQDGVYLN+A+G++ F++YW+M+R
Subjt:  HCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR

KAE8648173.1 hypothetical protein Csa_018428 [Cucumis sativus]4.1e-3873.91Show/hide
Query:  MALKRLM-LLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTD
        MA +RLM LLL++LL+T  N SMAK+KK  K+K  KP LP PN+PIVSFEKFRVEIHN+L+MYLLDS CYSKD++ GLHVLFP+EQQNWSFKGNW DTT 
Subjt:  MALKRLM-LLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTD

Query:  FHCRLEWEEGCLEFD
        FHCRLEWE GCL+ D
Subjt:  FHCRLEWEEGCLEFD

XP_008453055.1 PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]1.6e-4255.4Show/hide
Query:  MAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPD
        MA      K++ T P+LP P++P+V+F KF + I+N L MYLLDSHCYSKD+DLG  VL+PN++Q+WSF+GNW+ TT+FHC+LEWE G LEFD+F +D  
Subjt:  MAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPD

Query:  FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR
        F+ N C   +C WSARQDGVYL + +G+  F   W+M+R
Subjt:  FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR

XP_022933678.1 S-protein homolog 2-like [Cucurbita moschata]2.4e-4656.71Show/hide
Query:  MALKRLMLLLIVLLVTLLNTSM----AKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVD
        MA++R MLLL+++L+   + SM        K PK K TKPK   PN+P  +FE+F VEIHN+L M++LD+HC SKD+DLGLH+LFP+E+Q+WSF  NW+ 
Subjt:  MALKRLMLLLIVLLVTLLNTSM----AKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVD

Query:  TTDFHCRLEWEEGCLEFDSFVSDPD-FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML
        TT+FHCRLEW+ G LEFD+F S+ D  +I+ C N TCIWSARQDGVYLN+      F++YWDML
Subjt:  TTDFHCRLEWEEGCLEFDSFVSDPD-FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML

XP_023546843.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.7e-3950Show/hide
Query:  LKRL-MLLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFH
        ++RL +LLL++LL+ L++ +M+   K  K   T P+ P PN P ++  KF V I N L MYLLDSHC SKD+DLG+HV++P+++Q+WSF+GNW+ +T+FH
Subjt:  LKRL-MLLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFH

Query:  CRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML
        C+LEW  G +EFD+F  D +FV   C + +C+W+A+QDGVYL D +G+  F D+W+ML
Subjt:  CRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML

TrEMBL top hitse value%identityAlignment
A0A0A0KIQ4 S-protein homolog2.8e-4574.05Show/hide
Query:  MALKRLM-LLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTD
        MA +RLM LLL++LL+T  N SMAK+KK  K+K  KP LP PN+PIVSFEKFRVEIHN+L+MYLLDS CYSKD++ GLHVLFP+EQQNWSFKGNW DTT 
Subjt:  MALKRLM-LLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTD

Query:  FHCRLEWEEGCLEFDSFVSDPDFVINNCCNK
        FHCRLEWE G LEFDSF SDP FV + CCNK
Subjt:  FHCRLEWEEGCLEFDSFVSDPDFVINNCCNK

A0A0A0KL79 S-protein homolog7.5e-5469.63Show/hide
Query:  KKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVIN
        KK  KNK+  PKL  PN+P+V FE+F VEIHN+L M++LDSHCYSKD+DLGLH+LFP+E+Q+WSFKGNW+ TT FHCRLEWE G LEFDSF S PDFV N
Subjt:  KKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVIN

Query:  NCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR
         C N+TCIWSARQDGVYLN+A+G++ F++YW+M+R
Subjt:  NCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR

A0A0A0KSN2 S-protein homolog1.3e-3751.57Show/hide
Query:  MALKRLMLLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDF
        MA   L+LL+ + L+ L + SMA+               P    I+    +++EIHN+L MYLLDSHC+SKDNDLGLH+LFP E Q+WSF+ N  +TT F
Subjt:  MALKRLMLLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDF

Query:  HCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML
         C LEWE G LEFDSF ++ +F+ N C N TC WSARQDGVYL +  G+  F DYWDML
Subjt:  HCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML

A0A1S3BUQ9 S-protein homolog7.8e-4355.4Show/hide
Query:  MAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPD
        MA      K++ T P+LP P++P+V+F KF + I+N L MYLLDSHCYSKD+DLG  VL+PN++Q+WSF+GNW+ TT+FHC+LEWE G LEFD+F +D  
Subjt:  MAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPD

Query:  FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR
        F+ N C   +C WSARQDGVYL + +G+  F   W+M+R
Subjt:  FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR

A0A6J1F5H5 S-protein homolog1.2e-4656.71Show/hide
Query:  MALKRLMLLLIVLLVTLLNTSM----AKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVD
        MA++R MLLL+++L+   + SM        K PK K TKPK   PN+P  +FE+F VEIHN+L M++LD+HC SKD+DLGLH+LFP+E+Q+WSF  NW+ 
Subjt:  MALKRLMLLLIVLLVTLLNTSM----AKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVD

Query:  TTDFHCRLEWEEGCLEFDSFVSDPD-FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML
        TT+FHCRLEW+ G LEFD+F S+ D  +I+ C N TCIWSARQDGVYLN+      F++YWDML
Subjt:  TTDFHCRLEWEEGCLEFDSFVSDPD-FVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDML

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.0e-0729.5Show/hide
Query:  LLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDP-----IVSFEKFRVEIHNNL-HMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHC
        L + +L+  + T +++        + K  +P PNDP     +    K  VEI+N+L +   L  HC SKD+DLG   L P E  ++SF   +   T + C
Subjt:  LLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDP-----IVSFEKFRVEIHNNL-HMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHC

Query:  RLEWEEGCLEFDSFVSDPDFVINNCC-NKTCIWSARQDG
           W      FD +    D   +N C +  C+W  R++G
Subjt:  RLEWEEGCLEFDSFVSDPDFVINNCC-NKTCIWSARQDG

F4JLS0 S-protein homolog 15.4e-0934.41Show/hide
Query:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYWDM
        HC SK++DLG   L    + +W+F  N + +T F C +  + G +  + F  D   + + C  K CIW+A+ DG+YL N ASG++     W++
Subjt:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYWDM

P0DN93 S-protein homolog 291.0e-0732.69Show/hide
Query:  FEKFRVEIHNNLH-MYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDA
        F K  V + NN+     L   C SKD+DLG H+L   +   W F+ +W  TT F C+  W      FD++ SD D    +C   +C WS   D   ++  
Subjt:  FEKFRVEIHNNLH-MYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDA

Query:  SGKE
          K+
Subjt:  SGKE

Q2HQ46 S-protein homolog 741.2e-0834.07Show/hide
Query:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYW
        HC SK+NDLG   L   ++ +W+F  N + +T F C +  ++G +    F  D   + + C  K C+W+A+ DG+YL N A G++   + W
Subjt:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYW

Q3E9W6 S-protein homolog 201.3e-0738.54Show/hide
Query:  LDSHCYSKDNDLGLHVLFPNEQQNWSFKG--NWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWD
        L  HC SKD DLG   L P  QQ+W F+   ++   T F C  EWE     FD  V+  D   N C    C+WS R  G      +GKE  F + D
Subjt:  LDSHCYSKDNDLGLHVLFPNEQQNWSFKG--NWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWD

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family7.2e-0929.5Show/hide
Query:  LLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDP-----IVSFEKFRVEIHNNL-HMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHC
        L + +L+  + T +++        + K  +P PNDP     +    K  VEI+N+L +   L  HC SKD+DLG   L P E  ++SF   +   T + C
Subjt:  LLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDP-----IVSFEKFRVEIHNNL-HMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHC

Query:  RLEWEEGCLEFDSFVSDPDFVINNCC-NKTCIWSARQDG
           W      FD +    D   +N C +  C+W  R++G
Subjt:  RLEWEEGCLEFDSFVSDPDFVINNCC-NKTCIWSARQDG

AT4G16295.1 S-protein homologue 13.8e-1034.41Show/hide
Query:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYWDM
        HC SK++DLG   L    + +W+F  N + +T F C +  + G +  + F  D   + + C  K CIW+A+ DG+YL N ASG++     W++
Subjt:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYWDM

AT4G24975.1 Plant self-incompatibility protein S1 family9.5e-0938.54Show/hide
Query:  LDSHCYSKDNDLGLHVLFPNEQQNWSFKG--NWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWD
        L  HC SKD DLG   L P  QQ+W F+   ++   T F C  EWE     FD  V+  D   N C    C+WS R  G      +GKE  F + D
Subjt:  LDSHCYSKDNDLGLHVLFPNEQQNWSFKG--NWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWD

AT4G29035.1 Plant self-incompatibility protein S1 family8.6e-1034.07Show/hide
Query:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYW
        HC SK+NDLG   L   ++ +W+F  N + +T F C +  ++G +    F  D   + + C  K C+W+A+ DG+YL N A G++   + W
Subjt:  HCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDGVYL-NDASGKETFFDYW

AT5G12060.1 Plant self-incompatibility protein S1 family1.2e-0836.36Show/hide
Query:  LDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDG
        L+ HC S D+DLGL +L PN   ++ F+ + V TT F+C   W      FD +  D D V ++     CIW     G
Subjt:  LDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGCLEFDSFVSDPDFVINNCCNKTCIWSARQDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTAAAACGACTTATGTTATTGTTAATTGTCCTGCTAGTAACCTTGTTGAACACATCGATGGCAAAAGAAAAAAAGTTTCCAAAAAACAAAAATACAAAGCCAAA
GTTACCTCCACCGAATGATCCTATCGTTTCATTTGAGAAATTTCGTGTAGAGATTCACAACAACTTGCATATGTACTTATTAGACAGCCATTGCTACTCCAAAGACAATG
ATTTAGGATTGCATGTGTTGTTCCCAAATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGGTTGACACAACAGATTTCCATTGTAGGTTGGAATGGGAAGAAGGGTGT
TTAGAATTTGATAGTTTTGTTAGTGATCCTGACTTTGTGATCAATAATTGTTGCAACAAAACCTGCATTTGGAGTGCCAGACAAGATGGGGTTTATTTGAATGATGCAAG
TGGGAAAGAAACTTTTTTTGATTACTGGGATATGCTTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATTAAAACGACTTATGTTATTGTTAATTGTCCTGCTAGTAACCTTGTTGAACACATCGATGGCAAAAGAAAAAAAGTTTCCAAAAAACAAAAATACAAAGCCAAA
GTTACCTCCACCGAATGATCCTATCGTTTCATTTGAGAAATTTCGTGTAGAGATTCACAACAACTTGCATATGTACTTATTAGACAGCCATTGCTACTCCAAAGACAATG
ATTTAGGATTGCATGTGTTGTTCCCAAATGAGCAGCAAAATTGGTCGTTTAAAGGGAATTGGGTTGACACAACAGATTTCCATTGTAGGTTGGAATGGGAAGAAGGGTGT
TTAGAATTTGATAGTTTTGTTAGTGATCCTGACTTTGTGATCAATAATTGTTGCAACAAAACCTGCATTTGGAGTGCCAGACAAGATGGGGTTTATTTGAATGATGCAAG
TGGGAAAGAAACTTTTTTTGATTACTGGGATATGCTTAGATAG
Protein sequenceShow/hide protein sequence
MALKRLMLLLIVLLVTLLNTSMAKEKKFPKNKNTKPKLPPPNDPIVSFEKFRVEIHNNLHMYLLDSHCYSKDNDLGLHVLFPNEQQNWSFKGNWVDTTDFHCRLEWEEGC
LEFDSFVSDPDFVINNCCNKTCIWSARQDGVYLNDASGKETFFDYWDMLR