| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.7e-201 | 40.66 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+A+DRW KAN+K +VYILAS++D+L+KKH+ M+SL+ +FGQ S S H+AIK++Y RMKEGT+V+EHVLDMM+HFNIAEVN ++E +Q+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNK--------------------SVPKNKEKGKC
+Q+L +KG E +ANVA T KR+F +G +S NK V KN +KGKC
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNK--------------------SVPKNKEKGKC
Query: FYCNGDGHWKRNCPKYLADKKAGKENQ------------------------GATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV-------
F+CN DGHWKRNCPKYLA+KKA K Q GATNH+C SFQETSSWK+L++GEITL VG GE++SA AVGD+
Subjt: FYCNGDGHWKRNCPKYLADKKAGKENQ------------------------GATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV-------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-----------------------
+IERLVKSG+LN+LED+SLPPCESCLEGKMTKRSFT KGLRAK PLELVH DLCGPMNVKARG YEYFI+FIDD+S
Subjt: -KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-----------------------
Query: ------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSVLGTPY
STPQQNGVSERRNRTLLDMVRSMMSYA LP+ FW +A+ET ++ILNNVPSKSVL TPY
Subjt: ------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSVLGTPY
Query: ELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVATNRSTKVAD
ELW G K+SLR+FRIWGCPA+VLV+NPKKLE SKLCLF+GYPKE+RGGLFY PQ+ KV VSTNATFLEEDH R+H+PRSK+VL+ + K AT D
Subjt: ELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVATNRSTKVAD
Query: QADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWELVNQPDEIR
+ ST+VVD+ + S S SQELR PR AMNDVDRDQW+KAMNLEMESMYFN VW LV+ P +++
Subjt: QADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWELVNQPDEIR
Query: PIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ--------------------------------------------------------------------
PI CKWIYK KRD G VQT+KA+LVAKGYTQ
Subjt: PIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ--------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNI
EQCPKTPQEVEDMR +PY+SAVGSLMYAMLCTRP+IC++VGIVSRYQSNP WT VKNI
Subjt: ---------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNI
Query: LKYLRRTRNYVLVYENKDLILTGYTDFDF
LKYLRRTRNY+LVY KDLILTGYTD DF
Subjt: LKYLRRTRNYVLVYENKDLILTGYTDFDF
|
|
| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y+LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
|
|
| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
|
|
| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
|
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.6e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
|
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| A0A5A7TWB9 Gag/pol protein | 1.2e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y+LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
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| A0A5D3CPJ6 Gag/pol protein | 1.6e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
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| A0A5D3CSZ6 Gag/pol protein | 1.6e-192 | 39.02 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+ ++RW KANEK + YILAS+S++L+KKHE M+SLQ +FGQ S HDA+KY+YN RM EG +V+EHVL+MMVHFN+AE+N V++E SQ+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
++SL+K KG + +ANVA TS R+F +G TSG KS+P NK+
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNKSVPK---NKE---------------------
Query: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
KG CF+CN +GHWKRNCPKYLA+KK K+ + GATNHVCSSFQ SSW+QLE GE+T+ VG G ++SA+AVG +
Subjt: -----KGKCFYCNGDGHWKRNCPKYLADKKAGKE----------------------NQGATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
+IERLVK+GLL++LE++SLP CESCLEGKMTKR FT KG RAKEPLELVH DLCGPMNVKARG +EYFI F DDYS
Subjt: ----------KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS--------------
Query: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
TPQQNGVSERRNRTLLDMVRSMMSYA LPN FW +AV+T VYILN VP
Subjt: ---------------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVP
Query: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
SKSV TP +LW G K SLRHFRIWGCPA+VL NPKKLE SKLCLF+GYPK TRGG FYDP+D KV VSTNATFLEEDHIR+HKPRSK+VL +SK
Subjt: SKSVLGTPYELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVA
Query: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
T ST+V ++ TRVV S++ +P Q LREPR AM DVD+D+W+KAMNLE+ESMYFN VW+
Subjt: TNRSTKVADQADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWE
Query: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
LV+QPD ++PI CKWIYK KR G VQT+KA+LVAKGYTQ
Subjt: LVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ-----------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
EQCPKTPQ+VE+MR +PYASAVGSLMYAMLCTRP+IC+AVGIVSRYQSNP
Subjt: ------------------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEF
Query: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
A WT VK ILKYLRRTR+Y LVY +KDLILTGYTD DF
Subjt: ALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFDF
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| E2GK51 Gag/pol protein (Fragment) | 8.4e-202 | 40.66 | Show/hide |
Query: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
R+A+DRW KAN+K +VYILAS++D+L+KKH+ M+SL+ +FGQ S S H+AIK++Y RMKEGT+V+EHVLDMM+HFNIAEVN ++E +Q+
Subjt: RDAHDRWTKANEKVKVYILASISDILSKKHEK-------MNSLQVLFGQLSSSAMHDAIKYVYNCRMKEGTNVKEHVLDMMVHFNIAEVNRVVMNEKSQI
Query: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNK--------------------SVPKNKEKGKC
+Q+L +KG E +ANVA T KR+F +G +S NK V KN +KGKC
Subjt: ------------------------------------YQSLLKNKGFEAKANVATTSKRRFQKGPTSGNK--------------------SVPKNKEKGKC
Query: FYCNGDGHWKRNCPKYLADKKAGKENQ------------------------GATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV-------
F+CN DGHWKRNCPKYLA+KKA K Q GATNH+C SFQETSSWK+L++GEITL VG GE++SA AVGD+
Subjt: FYCNGDGHWKRNCPKYLADKKAGKENQ------------------------GATNHVCSSFQETSSWKQLEDGEITLWVGLGELISALAVGDV-------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-----------------------
+IERLVKSG+LN+LED+SLPPCESCLEGKMTKRSFT KGLRAK PLELVH DLCGPMNVKARG YEYFI+FIDD+S
Subjt: -KIERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-----------------------
Query: ------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSVLGTPY
STPQQNGVSERRNRTLLDMVRSMMSYA LP+ FW +A+ET ++ILNNVPSKSVL TPY
Subjt: ------------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSVLGTPY
Query: ELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVATNRSTKVAD
ELW G K+SLR+FRIWGCPA+VLV+NPKKLE SKLCLF+GYPKE+RGGLFY PQ+ KV VSTNATFLEEDH R+H+PRSK+VL+ + K AT D
Subjt: ELWTGHKASLRHFRIWGCPAYVLVKNPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVATNRSTKVAD
Query: QADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWELVNQPDEIR
+ ST+VVD+ + S S SQELR PR AMNDVDRDQW+KAMNLEMESMYFN VW LV+ P +++
Subjt: QADQSTRVVDRPSTSSPSRPSQELREPR-----------------------------------AMNDVDRDQWVKAMNLEMESMYFNLVWELVNQPDEIR
Query: PIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ--------------------------------------------------------------------
PI CKWIYK KRD G VQT+KA+LVAKGYTQ
Subjt: PIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQ--------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNI
EQCPKTPQEVEDMR +PY+SAVGSLMYAMLCTRP+IC++VGIVSRYQSNP WT VKNI
Subjt: ---------------------------------------EQCPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNI
Query: LKYLRRTRNYVLVYENKDLILTGYTDFDF
LKYLRRTRNY+LVY KDLILTGYTD DF
Subjt: LKYLRRTRNYVLVYENKDLILTGYTDFDF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.0e-23 | 28.18 | Show/hide |
Query: LLNKLEDDSLPPCESCLEGKMTKRSF--TRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-------------------------------
LLN LE S CE CL GK + F + K PL +VH D+CGP+ YF+ F+D ++
Subjt: LLNKLEDDSLPPCESCLEGKMTKRSF--TRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-------------------------------
Query: ----------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSVLG---TPYELWTG
TPQ NGVSER RT+ + R+M+S A L FW AV T Y++N +PS++++ TPYE+W
Subjt: ----------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSVLG---TPYELWTG
Query: HKASLRHFRIWGCPAYVLVKNPK-KLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVATNRS
K L+H R++G YV +KN + K + S +F+GY E G +D +EK IV+ + E + + + + V SK + N++
Subjt: HKASLRHFRIWGCPAYVLVKNPK-KLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAISKVATNRS
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| P04146 Copia protein | 6.1e-08 | 42.5 | Show/hide |
Query: PYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNILKYLRRTRNYVLV------YENKDLILTGYTDFDF
P S +G LMY MLCTRP++ AV I+SRY S LW +K +L+YL+ T + L+ +ENK + GY D D+
Subjt: PYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNILKYLRRTRNYVLV------YENKDLILTGYTDFDF
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| P04146 Copia protein | 2.2e-05 | 32.31 | Show/hide |
Query: DRDQWVKAMNLEMESMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQE
D+ W +A+N E+ + N W + +P+ + +W++ K + +GN YKA+LVA+G+TQ+
Subjt: DRDQWVKAMNLEMESMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQE
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| P0CV72 Secreted RxLR effector protein 161 | 6.6e-10 | 41.77 | Show/hide |
Query: MRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNILKYLRRTRNYVLVYENKDLI-LTGYTDFDF
M+ VPY SAVG++MY M+ TRP++ AVG++S++ S+P W +K +L+YL+ T+ Y L + L GY+D D+
Subjt: MRRVPYASAVGSLMYAMLCTRPNICFAVGIVSRYQSNPEFALWTVVKNILKYLRRTRNYVLVYENKDLI-LTGYTDFDF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-44 | 23.83 | Show/hide |
Query: IERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-------------------------
++ L K L++ + ++ PC+ CL GK + SF R L+LV+ D+CGPM +++ G +YF+ FIDD S
Subjt: IERLVKSGLLNKLEDDSLPPCESCLEGKMTKRSFTRKGLRAKEPLELVHLDLCGPMNVKARGRYEYFINFIDDYS-------------------------
Query: ----------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYE
TPQ NGV+ER NRT+++ VRSM+ A LP FW AV+T Y++N PS + P
Subjt: ----------------------------------------STPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYE
Query: LWTGHKASLRHFRIWGCPAYVLVKNPK--KLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAI------------
+WT + S H +++GC A+ V + KL+ S C+FIGY E G +DP +KVI S + F E +R S+ V I
Subjt: LWTGHKASLRHFRIWGCPAYVLVKNPK--KLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEEDHIRDHKPRSKLVLEAI------------
Query: -SKVATNRSTKVADQADQSTRVV-----------------------------DRPSTSSPSRPSQEL------REPRAMNDV----DRDQWVKAMNLEME
A + + +V++Q +Q V+ +RP S PS E REP ++ +V +++Q +KAM EME
Subjt: -SKVATNRSTKVADQADQSTRVV-----------------------------DRPSTSSPSRPSQEL------REPRAMNDV----DRDQWVKAMNLEME
Query: SMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQEQ------------------------------------------------
S+ N ++LV P RP+ CKW++K K+D + YKA+LV KG+ Q++
Subjt: SMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQEQ------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------CPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGI
CP T +E +M +VPY+SAVGSLMYAM+CTRP+I AVG+
Subjt: ------------------------------------------------------------CPKTPQEVEDMRRVPYASAVGSLMYAMLCTRPNICFAVGI
Query: VSRYQSNPEFALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFD
VSR+ NP W VK IL+YLR T L + D IL GYTD D
Subjt: VSRYQSNPEFALWTVVKNILKYLRRTRNYVLVYENKDLILTGYTDFD
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.3e-13 | 25.12 | Show/hide |
Query: YEYF----INFIDDYSSTPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYELWTGHKASLRHFRIWGCPAYVLVK
+EYF I+ + TP+ NG+SER++R +++ +++S+AS+P +W +A VY++N +P+ + L +P++ G + R++GC Y ++
Subjt: YEYF----INFIDDYSSTPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYELWTGHKASLRHFRIWGCPAYVLVK
Query: --NPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEE-----------DHIRDHKPRSKLVLEAISKVATNRSTKVADQADQSTRVVDRP
N KL+ S+ C+F+GY L Q ++ +S + F E +++ + S V + + T A P
Subjt: --NPKKLEHCSKLCLFIGYPKETRGGLFYDPQDEKVIVSTNATFLEE-----------DHIRDHKPRSKLVLEAISKVATNRSTKVADQADQSTRVVDRP
Query: ST-SSPSRPSQ
S+ S+P R SQ
Subjt: ST-SSPSRPSQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.8e-13 | 34.31 | Show/hide |
Query: TPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYELWTGHKASLRHFRIWGCPAYVLVK--NPKKLEHCSKLCLFI
TP+ NG+SER++R +++M +++S+AS+P +W +A VY++N +P+ + L +P++ G + +++GC Y ++ N KLE SK C F+
Subjt: TPQQNGVSERRNRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYELWTGHKASLRHFRIWGCPAYVLVK--NPKKLEHCSKLCLFI
Query: GY
GY
Subjt: GY
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G24100.1 unknown protein | 2.7e-11 | 70.83 | Show/hide |
Query: NNPLDEPSPLAKTLPCQLARRPLFFRETNPQPRKHTLWQATTDFTNSE
N P DEP TL LARRPLFFRETNPQPRKHTLWQAT+DFT+ +
Subjt: NNPLDEPSPLAKTLPCQLARRPLFFRETNPQPRKHTLWQATTDFTNSE
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.0e-09 | 40.79 | Show/hide |
Query: REPRAMNDVDRD-QWVKAMNLEMESMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQEQ
+EP N+ W AM+ E+ +M WE+ P +PI CKW+YK K + G ++ YKA+LVAKGYTQ++
Subjt: REPRAMNDVDRD-QWVKAMNLEMESMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQEQ
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| AT4G30780.1 unknown protein | 5.2e-10 | 66.67 | Show/hide |
Query: NNPLDEPSPLAKTLPCQLARRPLFFRETNPQPRKHTLWQATTDFTNSE
N P D P TL LAR+PLFFRETNPQPRKHTLWQAT+DFT+ +
Subjt: NNPLDEPSPLAKTLPCQLARRPLFFRETNPQPRKHTLWQATTDFTNSE
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 5.9e-06 | 36.23 | Show/hide |
Query: NRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYELWTGHKASLRHFRIWGCPAYV
NRT+++ VRSM+ LP F A T V+I+N PS ++ P E+W + + R +GC AY+
Subjt: NRTLLDMVRSMMSYASLPNLFWEFAVETEVYILNNVPSKSV-LGTPYELWTGHKASLRHFRIWGCPAYV
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 7.7e-06 | 35.53 | Show/hide |
Query: REPRAMNDVDRDQ-WVKAMNLEMESMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQEQ
+EP+++ +D W +AM E++++ N W LV P + CKW++K K G + KA+LVAKG+ QE+
Subjt: REPRAMNDVDRDQ-WVKAMNLEMESMYFNLVWELVNQPDEIRPIYCKWIYKHKRDYMGNVQTYKAQLVAKGYTQEQ
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