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Clc07G06300 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G06300
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationClcChr07:11480382..11480756
RNA-Seq ExpressionClc07G06300
SyntenyClc07G06300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]7.1e-0641.56Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRII
        M +AL  +  PG KW+ +P   + L P  L   A++W+ FIK +L  T HD +IS +  M++YCIM  I L+V  II
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRII

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]6.0e-1347.62Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGL
        M DAL  +++ G KW+ S K + TLA   L+ E  LWVY +K  L  TTHD ++SRD  M  YCI+R I +DVG++IA Q+  L
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGL

XP_038882424.1 uncharacterized protein LOC120073695 [Benincasa hispida]6.9e-0944.16Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRII
        + DAL+ + +PG +W+     IH LA   L+ +A LWVY +K  L+ TTHD +ISRD  M  Y I   I ++VGR+I
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRII

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]5.4e-0643.86Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRD
        M +AL  + +PG++W  SPK I TL    L+++  LWVY +K  L  TTHD ++S+D
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRD

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.5e-1147.5Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQ
        M DAL T+ + G++W+ S K I TLA + L+ EA LWVY +K  +  T+HD ++SRD  M  YCI  GI +DV  +IA Q
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQ

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like3.4e-0641.56Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRII
        M +AL  +  PG KW+ +P   + L P  L   A++W+ FIK +L  T HD +IS +  M++YCIM  I L+V  II
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRII

A0A5D3BB37 Uncharacterized protein5.9e-0639.73Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDV
        M D L TI   G+ W+ +P   + L P  L  +AN+W++ +K+ L  T HD +IS D  M++YCIM+ I ++V
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDV

A0A5D3CW17 Uncharacterized protein3.2e-0438.1Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIY
        + DAL  I+ PG+KW+  P   + L P  L  E ++W+ FIK ++  T HD++IS +  M++Y
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIY

A0A5D3D7L3 Uncharacterized protein2.2e-0532.58Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGLFFKPR
        + DAL  +  P +KW+  P   + L    L  EA +W+ F+K  +  T HD++IS +  M++YCIM  + +++  II+  I      PR
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGLFFKPR

A0A5D3DVQ6 Uncharacterized protein2.2e-0534.91Show/hide
Query:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGLFFKPRGLSHPLPDYPP
        M +AL  +     KW+ +    + L    L  EA++W+ FIK  L  T HD +IS +  M++YCIM  I +DV  II   I      PRG       +P 
Subjt:  MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGLFFKPRGLSHPLPDYPP

Query:  KPERRC
          ER C
Subjt:  KPERRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACGCTCTCACAACCATCGTTAAACCAGGATCAAAGTGGAACACTTCCCCAAAGGCCATTCATACATTGGCGCCAACTTGCTTGATCGCCGAGGCCAAC
CTGTGGGTTTACTTCATCAAGCTGTCGCTACACCTTACAACGCATGACGCCTCAATATCAAGGGACTGTGCCATGGTCATTTACTGCATCATGCGGGGAATTCGA
CTAGACGTGGGACGCATCATTGCCCCACAAATTTGGGGGTTGTTTTTCAAGCCAAGGGGTCTGTCACACCCTCTCCCGGATTATCCTCCAAAACCCGAGAGGAGA
TGTGAAGACAGCAACCTTGACTCCTCTATAAGGTTCACTGTCCAACCGTTAATCACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGACGCTCTCACAACCATCGTTAAACCAGGATCAAAGTGGAACACTTCCCCAAAGGCCATTCATACATTGGCGCCAACTTGCTTGATCGCCGAGGCCAAC
CTGTGGGTTTACTTCATCAAGCTGTCGCTACACCTTACAACGCATGACGCCTCAATATCAAGGGACTGTGCCATGGTCATTTACTGCATCATGCGGGGAATTCGA
CTAGACGTGGGACGCATCATTGCCCCACAAATTTGGGGGTTGTTTTTCAAGCCAAGGGGTCTGTCACACCCTCTCCCGGATTATCCTCCAAAACCCGAGAGGAGA
TGTGAAGACAGCAACCTTGACTCCTCTATAAGGTTCACTGTCCAACCGTTAATCACGTAA
Protein sequenceShow/hide protein sequence
MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGLFFKPRGLSHPLPDYPPKPERR
CEDSNLDSSIRFTVQPLIT