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Clc07G06445 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G06445
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCACTA en-spm transposon protein
Genome locationClcChr07:11919480..11921527
RNA-Seq ExpressionClc07G06445
SyntenyClc07G06445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045598.1 uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa]9.3e-2635.09Show/hide
Query:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPEDNMVGPSQDR------------------------LADELVREANTLATDPAVEVGTT--
        HD   CR DV+PT+V+H+   E  NQ     DD FIND  E      S  R                        + +E  +   T A   A+ +GT   
Subjt:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPEDNMVGPSQDR------------------------LADELVREANTLATDPAVEVGTT--

Query:  ---SASGDN-------------SMSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKR
             S +N                +THF+ D +  VV K++  ++Q++F+E+R++LHK+YC+F++ + A  NP  RI + EDW ++CDRWET  W  KR
Subjt:  ---SASGDN-------------SMSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKR

Query:  EKNKKSREDLSFNHCCGSKSFLQVQNEL
        E NK+S   + FNH  G+KSFLQV++EL
Subjt:  EKNKKSREDLSFNHCCGSKSFLQVQNEL

KAA0045598.1 uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa]1.2e-0957.14Show/hide
Query:  LTENEKRMAHWYVFNNSSEITSHRREHLRLIHTRADTTSELSQRHRSQFPNWFKDH
        L+E+EKRM HWYV NN  +I S+RREHL LI+TR +   +L +RH+ +FPNWF+ H
Subjt:  LTENEKRMAHWYVFNNSSEITSHRREHLRLIHTRADTTSELSQRHRSQFPNWFKDH

KAA0045598.1 uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa]1.6e-2249.04Show/hide
Query:  SKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQV
        S+THF+ D +  +V K+++ ++Q+ F+E+R+ LHK+YCKF++ + A  NPP++I + EDW ++CDRWET  W  K+E NK+SR  + FNH  G+KSFLQV
Subjt:  SKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQV

Query:  QNEL
        ++EL
Subjt:  QNEL

KAA0062811.1 transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]2.9e-2741.8Show/hide
Query:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK
        HD   CR DV+ T+V+H+   E  NQ     DD FIND  E  ++    +Q RLA   V + NT + DP+   G  +A  +           +  GV   
Subjt:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK

Query:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL
         I+R ++Q++F+E+R++LHK+YC+F++P+ A  NPP RI   EDW ++CDRWET  W  KREKNK+SR  + FNH   + SFLQV+ EL
Subjt:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL

TYJ96742.1 uncharacterized protein E5676_scaffold986G00340 [Cucumis melo var. makuwa]2.9e-2741.8Show/hide
Query:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK
        HD   CR DV+ T+V+H+   E  NQ     DD FIND  E  ++    +Q RLA   V + NT + DP+   G  +A  +           +  GV   
Subjt:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK

Query:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL
         I+R ++Q++F+E+R++LHK+YC+F++P+ A  NPP RI   EDW ++CDRWET  W  KREKNK+SR  + FNH   + SFLQV+ EL
Subjt:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL

XP_022156286.1 uncharacterized protein LOC111023212 [Momordica charantia]9.6e-3163.81Show/hide
Query:  MSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQ
        M++ HF VDLSK VVNKFI +Q+Q SFK+YRS+LH++YC+FE+P+ A  NPPER+ N EDW  LCDRWET EW +  +KNKK+R  L FNH  GSKSFLQ
Subjt:  MSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQ

Query:  VQNEL
        +Q+EL
Subjt:  VQNEL

TrEMBL top hitse value%identityAlignment
A0A5A7TRX4 DUF4216 domain-containing protein4.5e-2635.09Show/hide
Query:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPEDNMVGPSQDR------------------------LADELVREANTLATDPAVEVGTT--
        HD   CR DV+PT+V+H+   E  NQ     DD FIND  E      S  R                        + +E  +   T A   A+ +GT   
Subjt:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPEDNMVGPSQDR------------------------LADELVREANTLATDPAVEVGTT--

Query:  ---SASGDN-------------SMSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKR
             S +N                +THF+ D +  VV K++  ++Q++F+E+R++LHK+YC+F++ + A  NP  RI + EDW ++CDRWET  W  KR
Subjt:  ---SASGDN-------------SMSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKR

Query:  EKNKKSREDLSFNHCCGSKSFLQVQNEL
        E NK+S   + FNH  G+KSFLQV++EL
Subjt:  EKNKKSREDLSFNHCCGSKSFLQVQNEL

A0A5A7TRX4 DUF4216 domain-containing protein5.9e-1057.14Show/hide
Query:  LTENEKRMAHWYVFNNSSEITSHRREHLRLIHTRADTTSELSQRHRSQFPNWFKDH
        L+E+EKRM HWYV NN  +I S+RREHL LI+TR +   +L +RH+ +FPNWF+ H
Subjt:  LTENEKRMAHWYVFNNSSEITSHRREHLRLIHTRADTTSELSQRHRSQFPNWFKDH

A0A5A7TRX4 DUF4216 domain-containing protein7.9e-2349.04Show/hide
Query:  SKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQV
        S+THF+ D +  +V K+++ ++Q+ F+E+R+ LHK+YCKF++ + A  NPP++I + EDW ++CDRWET  W  K+E NK+SR  + FNH  G+KSFLQV
Subjt:  SKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQV

Query:  QNEL
        ++EL
Subjt:  QNEL

A0A5A7VAV0 Transposon protein, putative, CACTA, En/Spm sub-class1.4e-2741.8Show/hide
Query:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK
        HD   CR DV+ T+V+H+   E  NQ     DD FIND  E  ++    +Q RLA   V + NT + DP+   G  +A  +           +  GV   
Subjt:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK

Query:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL
         I+R ++Q++F+E+R++LHK+YC+F++P+ A  NPP RI   EDW ++CDRWET  W  KREKNK+SR  + FNH   + SFLQV+ EL
Subjt:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL

A0A5D3BA62 DUF4218 domain-containing protein1.4e-2741.8Show/hide
Query:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK
        HD   CR DV+ T+V+H+   E  NQ     DD FIND  E  ++    +Q RLA   V + NT + DP+   G  +A  +           +  GV   
Subjt:  HDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPE--DNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNK

Query:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL
         I+R ++Q++F+E+R++LHK+YC+F++P+ A  NPP RI   EDW ++CDRWET  W  KREKNK+SR  + FNH   + SFLQV+ EL
Subjt:  FINR-QIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNEL

A0A6J1DUH3 uncharacterized protein LOC1110232124.6e-3163.81Show/hide
Query:  MSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQ
        M++ HF VDLSK VVNKFI +Q+Q SFK+YRS+LH++YC+FE+P+ A  NPPER+ N EDW  LCDRWET EW +  +KNKK+R  L FNH  GSKSFLQ
Subjt:  MSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQ

Query:  VQNEL
        +Q+EL
Subjt:  VQNEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAACTGAAAATGAGAAACGAATGGCACATTGGTATGTATTTAACAACAGTTCTGAGATAACGTCTCATCGTAGGGAACATTTGAGATTGATTCATACTCGAGCAGA
CACAACATCAGAATTATCTCAAAGACATCGATCACAATTCCCTAATTGGTTTAAAGACCATGATGCCATATTATGTCGAGATGACGTTGATCCTACTATTGTAGAACATC
AAGTTAATCTAGAACAATTGAACCAAAGTGTACCATATTCAGATGACAAATTTATAAATGATGGACCTGAAGATAATATGGTGGGGCCAAGTCAAGATCGTCTAGCAGAT
GAATTAGTTCGGGAAGCTAACACTTTGGCTACAGATCCCGCAGTAGAGGTAGGCACGACCTCCGCATCAGGTGATAATAGTATGTCTAAGACACATTTTGATGTGGACCT
ATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAACATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTG
CTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTTCTGAATGGCCGGACAAGAGGGAGAAGAACAAGAAGAGT
AGAGAAGATCTCAGCTTTAACCATTGTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAACTGAAAATGAGAAACGAATGGCACATTGGTATGTATTTAACAACAGTTCTGAGATAACGTCTCATCGTAGGGAACATTTGAGATTGATTCATACTCGAGCAGA
CACAACATCAGAATTATCTCAAAGACATCGATCACAATTCCCTAATTGGTTTAAAGACCATGATGCCATATTATGTCGAGATGACGTTGATCCTACTATTGTAGAACATC
AAGTTAATCTAGAACAATTGAACCAAAGTGTACCATATTCAGATGACAAATTTATAAATGATGGACCTGAAGATAATATGGTGGGGCCAAGTCAAGATCGTCTAGCAGAT
GAATTAGTTCGGGAAGCTAACACTTTGGCTACAGATCCCGCAGTAGAGGTAGGCACGACCTCCGCATCAGGTGATAATAGTATGTCTAAGACACATTTTGATGTGGACCT
ATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAACATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTG
CTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTTCTGAATGGCCGGACAAGAGGGAGAAGAACAAGAAGAGT
AGAGAAGATCTCAGCTTTAACCATTGTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGGTATGA
Protein sequenceShow/hide protein sequence
MLTENEKRMAHWYVFNNSSEITSHRREHLRLIHTRADTTSELSQRHRSQFPNWFKDHDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPEDNMVGPSQDRLAD
ELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKS
REDLSFNHCCGSKSFLQVQNELV