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Clc07G06470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G06470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP synthase subunit beta
Genome locationClcChr07:12365586..12367380
RNA-Seq ExpressionClc07G06470
SyntenyClc07G06470
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG0447195.1 hypothetical protein HPP92_028428 [Vanilla planifolia]4.7e-1365.43Show/hide
Query:  PEISESSAEVLRLRADSNTINRTSPDYYSVNKDGIRASDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        PE  +  A    LR   N     S D   V +     SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
Subjt:  PEISESSAEVLRLRADSNTINRTSPDYYSVNKDGIRASDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

PIA28991.1 hypothetical protein AQUCO_06400042v1 [Aquilegia coerulea]1.4e-1295.45Show/hide
Query:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        +DSRSSGERNGSSLNR+NGVVGEQYKRRAARRSGGVLHPRWRES
Subjt:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

PWA56542.1 hypothetical protein CTI12_AA417780 [Artemisia annua]5.8e-1190.91Show/hide
Query:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        SDSRSSGERNGSSLNRENGVVGEQYKRRAARRS  +LHPRWR+S
Subjt:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

QHN92995.1 uncharacterized protein DS421_17g588830 [Arachis hypogaea]1.5e-1193.18Show/hide
Query:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        SDS SSGERNGSSLNRENGVVGE YKRRAARRSGGVLHPRWR+S
Subjt:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

TKY46754.1 hypothetical protein E2542_SST28802 [Spatholobus suberectus]5.8e-1193.18Show/hide
Query:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        SDSRSSGERNGSSLNRENGVVGE YK RAARRS GVLHPRWRES
Subjt:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

TrEMBL top hitse value%identityAlignment
A0A0F6YSV6 ATP synthase subunit beta (Fragment)6.3e-1156.96Show/hide
Query:  QSGQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPE
        + G    R      G +       +P  D    APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST T  +P I+TPE
Subjt:  QSGQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPE

A0A2G5CCH7 Uncharacterized protein6.7e-1395.45Show/hide
Query:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        +DSRSSGERNGSSLNR+NGVVGEQYKRRAARRSGGVLHPRWRES
Subjt:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

A0A2U1M5J4 Uncharacterized protein2.8e-1190.91Show/hide
Query:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        SDSRSSGERNGSSLNRENGVVGEQYKRRAARRS  +LHPRWR+S
Subjt:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

A0A5N6Q012 MatK_N domain-containing protein8.2e-1188.64Show/hide
Query:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        SDSRSSGERNGSSLNRENGVVGEQYKRRA RRS  +LHPRWR+S
Subjt:  SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

A0A6N2MWA8 Uncharacterized protein ycf681.0e-1365.43Show/hide
Query:  PEISESSAEVLRLRADSNTINRTSPDYYSVNKDGIRASDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
        PE  +       LR   N   R S D   V +     SDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES
Subjt:  PEISESSAEVLRLRADSNTINRTSPDYYSVNKDGIRASDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRES

SwissProt top hitse value%identityAlignment
A4QJC2 ATP synthase subunit beta, chloroplastic4.2e-1251.72Show/hide
Query:  QSGQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV
        + G    R      G +       +P  D    APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST T  +P I+  E  E++ +V
Subjt:  QSGQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV

P07890 ATP synthase subunit beta1.9e-1257.14Show/hide
Query:  GQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPE
        GQ   R    + G +       +P  D    APATTFAHLDATTVLSRGLA+KGIYPAVDPLDST T  +PSI+  E
Subjt:  GQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPE

P26527 ATP synthase subunit beta3.2e-1274.07Show/hide
Query:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV
        APATTFAHLD TTVLSRGLAAKGIYPAVDPLDST T  +PSI+  E  +++ EV
Subjt:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV

Q31KS4 ATP synthase subunit beta1.9e-1257.14Show/hide
Query:  GQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPE
        GQ   R    + G +       +P  D    APATTFAHLDATTVLSRGLA+KGIYPAVDPLDST T  +PSI+  E
Subjt:  GQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPE

Q9MS49 ATP synthase subunit beta, chloroplastic1.4e-1252.27Show/hide
Query:  AQSGQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV
        A+ G    R      G +       +P  D    APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST T  +P I+  E  E++ +V
Subjt:  AQSGQRGRRSLDEVSGGLACALLTKIPQRD----APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV

Arabidopsis top hitse value%identityAlignment
AT5G08670.1 ATP synthase alpha/beta family protein3.4e-0985.29Show/hide
Query:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST
        APATTFAHLDATTVLSR ++  GIYPAVDPLDST
Subjt:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST

AT5G08680.1 ATP synthase alpha/beta family protein3.4e-0985.29Show/hide
Query:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST
        APATTFAHLDATTVLSR ++  GIYPAVDPLDST
Subjt:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST

AT5G08690.1 ATP synthase alpha/beta family protein3.4e-0985.29Show/hide
Query:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST
        APATTFAHLDATTVLSR ++  GIYPAVDPLDST
Subjt:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST

ATCG00480.1 ATP synthase subunit beta3.0e-1374.07Show/hide
Query:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV
        APATTFAHLDATTVLSRGLAAKGIYPAVDPLDST T  +P I+  E  E++ +V
Subjt:  APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTIT--RPSIITPEISESSAEV

ATMG00030.1 hypothetical protein1.6e-0658.14Show/hide
Query:  PIGDPWITDGTSPWPFASSSGRPAPDQLGYPANSWVSIRACTQ
        PIGDPWITDG SPWPFAS S  P+     +P +S+   R+CTQ
Subjt:  PIGDPWITDGTSPWPFASSSGRPAPDQLGYPANSWVSIRACTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAGTTTGGTTTGAGTGTTCATCGATTGGGTGGATCTATATGCTCCGGGGGGGTGAGACGAGGTGTAGCGCAGTCTGGTCAGAGGGGGCGAAGGAGTCTCGACGA
GGTGTCGGGGGGACTTGCTTGTGCGCTTCTAACGAAGATACCTCAGCGAGATGCTCCTGCCACCACATTTGCACATTTGGATGCTACTACCGTACTATCAAGAGGATTAG
CTGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGATAACTCGTCCATCAATAATAACCCCAGAGATATCAGAATCTTCAGCAGAAGTATTGAGATTGCGC
GCTGACAGCAACACCATTAATCGAACGAGTCCGGATTACTACTCGGTCAATAAAGACGGAATCAGGGCTAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCT
AAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCGGTCGCCTTTGGAAGCGTT
CGCCGGCCTTATGTTATGAGGGTCAACCTCCTAACCCGATCGGAGATCCATGGATCACAGACGGTACCTCCCCATGGCCTTTCGCCTCTTCAAGCGGCCGGCCCGCCCCT
GACCAGCTGGGATATCCGGCTAATTCTTGGGTTTCCATTAGGGCTTGCACCCAATCCCATAGAGGCATGGTTTTGTTTTCGTTTGTCTACGAGGAACTTCAAAGAGCAGC
CACACTTGGAGCCTACGACGAAGCACTGCGTAGGAGAACTTCGCCACCTCTCTGGCCATGCCTCACCGCCCTTGCTTCGACCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAGTTTGGTTTGAGTGTTCATCGATTGGGTGGATCTATATGCTCCGGGGGGGTGAGACGAGGTGTAGCGCAGTCTGGTCAGAGGGGGCGAAGGAGTCTCGACGA
GGTGTCGGGGGGACTTGCTTGTGCGCTTCTAACGAAGATACCTCAGCGAGATGCTCCTGCCACCACATTTGCACATTTGGATGCTACTACCGTACTATCAAGAGGATTAG
CTGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGATAACTCGTCCATCAATAATAACCCCAGAGATATCAGAATCTTCAGCAGAAGTATTGAGATTGCGC
GCTGACAGCAACACCATTAATCGAACGAGTCCGGATTACTACTCGGTCAATAAAGACGGAATCAGGGCTAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCT
AAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCGGTCGCCTTTGGAAGCGTT
CGCCGGCCTTATGTTATGAGGGTCAACCTCCTAACCCGATCGGAGATCCATGGATCACAGACGGTACCTCCCCATGGCCTTTCGCCTCTTCAAGCGGCCGGCCCGCCCCT
GACCAGCTGGGATATCCGGCTAATTCTTGGGTTTCCATTAGGGCTTGCACCCAATCCCATAGAGGCATGGTTTTGTTTTCGTTTGTCTACGAGGAACTTCAAAGAGCAGC
CACACTTGGAGCCTACGACGAAGCACTGCGTAGGAGAACTTCGCCACCTCTCTGGCCATGCCTCACCGCCCTTGCTTCGACCCATTAG
Protein sequenceShow/hide protein sequence
MGEFGLSVHRLGGSICSGGVRRGVAQSGQRGRRSLDEVSGGLACALLTKIPQRDAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTITRPSIITPEISESSAEVLRLR
ADSNTINRTSPDYYSVNKDGIRASDSRSSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRESGRLWKRSPALCYEGQPPNPIGDPWITDGTSPWPFASSSGRPAP
DQLGYPANSWVSIRACTQSHRGMVLFSFVYEELQRAATLGAYDEALRRRTSPPLWPCLTALASTH