| GenBank top hits | e value | %identity | Alignment |
|---|
| AHM88854.1 RNA polymerase beta subunit, partial [Lagenaria siceraria] | 6.1e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| AHM89856.1 RNA polymerase beta subunit [Lagenaria siceraria] | 6.1e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| QJR52948.1 RNA polymerase beta subunit [Herpetospermum pedunculosum] | 6.1e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| YP_009752827.1 RNA polymerase subunit beta [Baijiania yunnanensis] | 6.1e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| YP_009753166.1 RNA polymerase subunit beta [Trichosanthes truncata] | 6.1e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4ETZ9 DNA-directed RNA polymerase subunit beta | 3.0e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| A0A1X9Q1B9 DNA-directed RNA polymerase subunit beta | 3.0e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| A0A218KG28 DNA-directed RNA polymerase subunit beta | 3.0e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| A0A249RZI0 DNA-directed RNA polymerase subunit beta | 3.0e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| A0A6H0ETN6 DNA-directed RNA polymerase subunit beta | 3.0e-77 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A4QJA7 DNA-directed RNA polymerase subunit beta | 1.7e-77 | 93.38 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRKLVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| A4QJJ1 DNA-directed RNA polymerase subunit beta | 1.7e-77 | 93.38 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRKLVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| A4QK10 DNA-directed RNA polymerase subunit beta | 1.7e-77 | 93.38 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRKLVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| P50546 DNA-directed RNA polymerase subunit beta | 1.7e-77 | 93.38 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRKLVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| Q4VZP1 DNA-directed RNA polymerase subunit beta | 8.0e-80 | 96.69 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEY KSRIF GRT NPFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGRAKQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G29940.1 nuclear RNA polymerase A2 | 2.4e-10 | 27.33 | Show/hide |
Query: GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERY-----EQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQP
G D++ NP PSRM + + E GSL + PF + E+E+ L+ +L K+ + ++ G +
Subjt: GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERY-----EQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQP
Query: VIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
+ +G Y +L H V DK RS+G +T Q ++GR + GG R GEME
Subjt: VIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| AT3G23780.1 nuclear RNA polymerase D2A | 2.9e-08 | 25.47 | Show/hide |
Query: PYLQNGRPVDMVFNPLGVPSRMNVGQIFECSL--GLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFE-PEYLQKS--------RIF
P+ G D+V NP PSR GQ+ E +L G+A + Q+ +++L + ++P V E E L ++ R++
Subjt: PYLQNGRPVDMVFNPLGVPSRMNVGQIFECSL--GLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFE-PEYLQKS--------RIF
Query: YGRTRNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
GR+ + +G + +L+H +DK+ R++G +T+Q + R + GG + GEME
Subjt: YGRTRNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| AT4G21710.1 DNA-directed RNA polymerase family protein | 4.4e-17 | 32.45 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MP+ G D++ NP +PSRM +GQ+ EC +G + + + PF + S+ L++ Q FE R++ G T P
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
+ +G Y +L H VDDKIH R G ++T+Q GR++ GG R GEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
| AT5G45140.1 nuclear RNA polymerase C2 | 4.9e-16 | 32.32 | Show/hide |
Query: PYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQP
P+ + G D++ NP G PSRM VG++ E AG R + F ER + + + L E Y K ++ G + P E
Subjt: PYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQP
Query: VIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEMEE----AYASKLLLF
+ +G Y KL H V DK+H R SG ++T+Q G++K GG RVGEME AY + +L++
Subjt: VIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEMEE----AYASKLLLF
|
|
| ATCG00190.1 RNA polymerase subunit beta | 1.2e-78 | 93.38 | Show/hide |
Query: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
MPYLQ+GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRI PFDERYEQEASRKLVFSELYEASKQTA+PWVFEPEY KSRIF GRT +PFEQ
Subjt: MPYLQNGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIVPFDERYEQEASRKLVFSELYEASKQTASPWVFEPEYLQKSRIFYGRTRNPFEQ
Query: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQ LRGR+KQGGQRVGEME
Subjt: PVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQSLRGRAKQGGQRVGEME
|
|
