; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G06580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G06580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal RNA small subunit methyltransferase NEP1-like
Genome locationClcChr07:13244520..13248927
RNA-Seq ExpressionClc07G06580
SyntenyClc07G06580
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267774.1 unnamed protein product [Prunus armeniaca]7.6e-6654.8Show/hide
Query:  KSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDI
        +SQ+ SS+   +K +  E   +   +E    + +L    N    + R IFV++NA L KG V K+WKILDS  D DFLLK KK+L DFR   V + L  I
Subjt:  KSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDI

Query:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATN
         DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EPV++HLP NSR++G+S   EKLVDI  YV++ +
Subjt:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATN

Query:  DDMNLIFVVSATDHKKIN-ICTDDVISVSHYPLVSMSCVGMICEALEHKW
        D++NL+FVV A  H KI+   TDD ISVS+YPL +  CVG+ICE+LEHKW
Subjt:  DDMNLIFVVSATDHKKIN-ICTDDVISVSHYPLVSMSCVGMICEALEHKW

KAA0032138.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]2.8e-12990.15Show/hide
Query:  MPPQKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENV
        MPPQKRR S+S SSKLAR KQE VENL ELKNVEDV T  SLLD+MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF  ENV
Subjt:  MPPQKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQ
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEP+SQHLPSNSRIIGVSNGLEKLVDIQ
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQ

Query:  NYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN
        NYVS T DD N +FVVSATDHKKINIC DD+ISVSHYPLVSMSCVGMICEALEHKWIVEP  HN
Subjt:  NYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN

TYK14383.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]7.4e-7791.36Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNY
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEP+SQHLPSNSR   VSNGLEKLVDIQNY
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNY

Query:  VSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN
        VS T DD N +FVVSATDHKKINIC DD+ISVSHYPLVSMSCVGMICEALEHKWIVEP  HN
Subjt:  VSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN

XP_008456875.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo]5.4e-11292.27Show/hide
Query:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF  ENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSC
        RFCGLILDLLKKRCIRAEDTNEVLFR+LNEP+SQHLPSNSRIIGVSNGLEKLVDIQNYVS T DD N +FVVSATDHKKINIC DD+ISVSHYPLVSMSC
Subjt:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSC

Query:  VGMICEALEHKWIVEPPSHN
        VGMICEALEHKWIVEP  HN
Subjt:  VGMICEALEHKWIVEPPSHN

XP_038891816.1 ribosomal RNA small subunit methyltransferase nep-1-like [Benincasa hispida]2.7e-9593.33Show/hide
Query:  MPPQKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENV
        M  QKRR S+SSSSKLARLKQERVENL ELKNVEDVNTN SLLDV+NEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRDQ FLLKHKKNLKDF  ENV
Subjt:  MPPQKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEK
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEP+SQHLP NSRIIGVSNGLEK
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEK

TrEMBL top hitse value%identityAlignment
A0A1S3C5G9 ribosomal RNA small subunit methyltransferase NEP1-like2.6e-11292.27Show/hide
Query:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF  ENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSC
        RFCGLILDLLKKRCIRAEDTNEVLFR+LNEP+SQHLPSNSRIIGVSNGLEKLVDIQNYVS T DD N +FVVSATDHKKINIC DD+ISVSHYPLVSMSC
Subjt:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSC

Query:  VGMICEALEHKWIVEPPSHN
        VGMICEALEHKWIVEP  HN
Subjt:  VGMICEALEHKWIVEPPSHN

A0A5A7SNC0 Ribosomal RNA small subunit methyltransferase NEP1-like1.4e-12990.15Show/hide
Query:  MPPQKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENV
        MPPQKRR S+S SSKLAR KQE VENL ELKNVEDV T  SLLD+MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF  ENV
Subjt:  MPPQKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQ
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEP+SQHLPSNSRIIGVSNGLEKLVDIQ
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQ

Query:  NYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN
        NYVS T DD N +FVVSATDHKKINIC DD+ISVSHYPLVSMSCVGMICEALEHKWIVEP  HN
Subjt:  NYVSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN

A0A5D3CR92 Ribosomal RNA small subunit methyltransferase NEP1-like3.6e-7791.36Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNY
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEP+SQHLPSNSR   VSNGLEKLVDIQNY
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNY

Query:  VSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN
        VS T DD N +FVVSATDHKKINIC DD+ISVSHYPLVSMSCVGMICEALEHKWIVEP  HN
Subjt:  VSATNDDMNLIFVVSATDHKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN

A0A6J5TWQ3 Uncharacterized protein3.7e-6654.8Show/hide
Query:  KSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDI
        +SQ+ SS+   +K +  E   +   +E    + +L    N    + R IFV++NA L KG V K+WKILDS  D DFLLK KK+L DFR   V + L  I
Subjt:  KSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDI

Query:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATN
         DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EPV++HLP NSR++G+S   EKLVDI  YV++ +
Subjt:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATN

Query:  DDMNLIFVVSATDHKKIN-ICTDDVISVSHYPLVSMSCVGMICEALEHKW
        D++NL+FVV A  H KI+   TDD ISVS+YPL +  CVG+ICE+LEHKW
Subjt:  DDMNLIFVVSATDHKKIN-ICTDDVISVSHYPLVSMSCVGMICEALEHKW

M5Y7H9 Uncharacterized protein (Fragment)1.4e-6560.66Show/hide
Query:  NEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRF
        N    + R IFV++NA L KG V K+WKILDS  D DFLLK KK+L DFR   V + L  I DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RF
Subjt:  NEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRF

Query:  CGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKIN-ICTDDVISVSHYPLVSMSCV
        CG+IL+LL  +CIR +DTNE+L RV+ EPV++HLP NSR++G+S   EKLVDI  YV++ +D++NL+FVV A  H KI+   TDD ISVS+YPL +  C+
Subjt:  CGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKIN-ICTDDVISVSHYPLVSMSCV

Query:  GMICEALEHKW
        G+ICE+LEHKW
Subjt:  GMICEALEHKW

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP17.0e-3036.27Show/hide
Query:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VL+ A L    VGK +++L+  R +  LLK+ ++  + R +   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINI-CTDDVISVSHYPLVSMSCVGMICEAL
        L K  +RA D  + L +V+  PVS H P     IG S  +E + DI+  V +++    ++FVV A  H K+++  T+ ++S+S+YPL +      +  A 
Subjt:  LKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINI-CTDDVISVSHYPLVSMSCVGMICEAL

Query:  EHKW
        E  W
Subjt:  EHKW

Q06287 Ribosomal RNA small subunit methyltransferase NEP15.2e-2533.49Show/hide
Query:  RVIFVLDNAPL--HK----GLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC
        R+I VL  A L  HK    G  G K+ +L+    Q  L K  +++ + R +   Q LL + DS +NKAGK+  VY++   G+L E+ P  RIPRT+ RF 
Subjt:  RVIFVLDNAPL--HK----GLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC

Query:  GLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINIC---TDDVISVSHYPLVSMSC
        GL++ LL K  IR+ ++ E L +V+  P++ HLP+  R + +S     ++ +Q+Y+   +DD ++   V A    K N      D+ + +S+YPL +   
Subjt:  GLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINIC---TDDVISVSHYPLVSMSC

Query:  VGMICEALEHKW
            C   E  W
Subjt:  VGMICEALEHKW

Q92979 Ribosomal RNA small subunit methyltransferase NEP12.3e-2834.31Show/hide
Query:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VL+ A L    VGK +++L+  + +  LLK+ ++  + R +   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINI-CTDDVISVSHYPLVSMSCVGMICEAL
        L K  +RA D  + L +V+  PVS H P     +G S  +  + D++  V +++    ++FVV A  H K+++  T+ ++S+S+YPL +      +  A 
Subjt:  LKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINI-CTDDVISVSHYPLVSMSCVGMICEAL

Query:  EHKW
        E  W
Subjt:  EHKW

Q9P8P7 Ribosomal RNA small subunit methyltransferase NEP15.2e-2533.96Show/hide
Query:  RVIFVLDNAPLHK------GLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC
        R+I VL  A L        G  G ++ +L+    Q  L K  +++ + R +   Q LL + DS +NKAG++  VY++   GVL E+ P  RIPRT+ RF 
Subjt:  RVIFVLDNAPLHK------GLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC

Query:  GLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINIC---TDDVISVSHYPLVSMSC
        GL++ LL K  IR+E++ EVL +V+  P++ HLP+  R + +S   E L  +Q+YV+  +++ ++   V A    K N      D+ I +S YPL +   
Subjt:  GLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINIC---TDDVISVSHYPLVSMSC

Query:  VGMICEALEHKW
            C   E  W
Subjt:  VGMICEALEHKW

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-14.3e-2733.33Show/hide
Query:  NGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR
        N   +   N+   +  +  VL+   L    VG ++ IL S +  +FL K KK+  D+R + + Q LL++ DS +N+AGK+  V+ +    VL ++ P  R
Subjt:  NGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR

Query:  IPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINI-CTDDVISVSHY
        IPRT++RFCGL++ LL K  IRA +T + L  V+  PVS HLP  SR + +S  + +L  + N + A   D  L+ ++      KI +   D    +S+Y
Subjt:  IPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATDHKKINI-CTDDVISVSHY

Query:  PLVSMSCVGMICEALEHKW
        PL +      +   LE  W
Subjt:  PLVSMSCVGMICEALEHKW

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related3.9e-4439.02Show/hide
Query:  QKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKP--------QEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDF
        ++++K++ SS K  +    R E   + + V  V    +  D++   P        ++  ++FVL+ A L    VGK +++L+S    +FL K+ +N  D+
Subjt:  QKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKP--------QEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDF

Query:  RLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQ-HLPSNSRIIGVSNGLE
        R +   Q LL I DS VNKAG++ AVYV+ + GVLFE+KPH RIPRT+ RF G++L LL+K  I A ++ E L R +  P+ + HLP NS  IG S+  E
Subjt:  RLENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQ-HLPSNSRIIGVSNGLE

Query:  KLVDIQNYVSAT-NDDMNLIFVVSATDHKKINI-CTDDVISVSHYPLVSMSCVGMICEALEHKW
        KLV++Q +++   +DD + +FVV A  H KI+    D+ +SVS YPL +  C+  ICEAL   W
Subjt:  KLVDIQNYVSAT-NDDMNLIFVVSATDHKKINI-CTDDVISVSHYPLVSMSCVGMICEALEHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTCAGAAAAGGAGGAAGTCTCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAACAGGAGAGGGTAGAAAATTTAGGTGAATTGAAAAATGTAGAAGATGTTAA
TACGAACGGCAGTTTGCTGGATGTGATGAATGAGAAGCCTCAAGAACCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGA
AGATTCTTGATTCATGGAGAGATCAAGATTTCCTTCTCAAGCATAAGAAGAATCTTAAAGACTTTAGGCTTGAAAATGTTCGTCAGCCTCTCCTTGACATTTTTGACAGC
CGAGTTAATAAAGCTGGAAAAGTAGGGGCTGTTTATGTCAAAATTGACGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTG
TGGACTGATATTGGATTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCAGTGTCTCAACATTTGCCCAGCAACT
CTCGTATTATTGGTGTCTCTAATGGTTTGGAAAAGTTAGTTGACATACAGAATTATGTGTCTGCTACTAACGATGATATGAATCTCATTTTTGTGGTCAGTGCGACAGAT
CATAAGAAAATTAATATATGTACGGATGACGTGATATCAGTTTCACATTATCCACTGGTGTCCATGAGTTGTGTAGGTATGATTTGTGAAGCATTGGAGCATAAATGGAT
CGTTGAACCTCCTTCACATAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCTCAGAAAAGGAGGAAGTCTCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAACAGGAGAGGGTAGAAAATTTAGGTGAATTGAAAAATGTAGAAGATGTTAA
TACGAACGGCAGTTTGCTGGATGTGATGAATGAGAAGCCTCAAGAACCTCGGGTAATATTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGGAAGAAGTGGA
AGATTCTTGATTCATGGAGAGATCAAGATTTCCTTCTCAAGCATAAGAAGAATCTTAAAGACTTTAGGCTTGAAAATGTTCGTCAGCCTCTCCTTGACATTTTTGACAGC
CGAGTTAATAAAGCTGGAAAAGTAGGGGCTGTTTATGTCAAAATTGACGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCAAGAACATACAATCGCTTTTG
TGGACTGATATTGGATTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCAGTGTCTCAACATTTGCCCAGCAACT
CTCGTATTATTGGTGTCTCTAATGGTTTGGAAAAGTTAGTTGACATACAGAATTATGTGTCTGCTACTAACGATGATATGAATCTCATTTTTGTGGTCAGTGCGACAGAT
CATAAGAAAATTAATATATGTACGGATGACGTGATATCAGTTTCACATTATCCACTGGTGTCCATGAGTTGTGTAGGTATGATTTGTGAAGCATTGGAGCATAAATGGAT
CGTTGAACCTCCTTCACATAACTGA
Protein sequenceShow/hide protein sequence
MPPQKRRKSQSSSSKLARLKQERVENLGELKNVEDVNTNGSLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQDFLLKHKKNLKDFRLENVRQPLLDIFDS
RVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPVSQHLPSNSRIIGVSNGLEKLVDIQNYVSATNDDMNLIFVVSATD
HKKINICTDDVISVSHYPLVSMSCVGMICEALEHKWIVEPPSHN