CuGenDBv2

Gene ID	Clc07G06745
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	ClcChr07:14258849..14259545
RNA-Seq Expression	Clc07G06745
Synteny	Clc07G06745
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR006243 - Photosystem I PsaA IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG9438620.1 hypothetical protein H6P81_021443 [Aristolochia fimbriata]

2.4e-52

88.6

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQ+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQFL+ GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

PHT34484.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum]

3.5e-51

87.72

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP++Q+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLL  QFLN GVD KE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

PHT36605.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum]

6.4e-53

89.47

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQ+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

RWW34472.1 hypothetical protein GW17_00000749 [Ensete ventricosum]

2.0e-51

86.84

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HI P+AQLWRA GITSELQLYCT IGALVFA+LMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

TKS04886.1 Photosystem I P700 chlorophyll a apoprotein A1 [Populus alba]

3.7e-53

90.35

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

TrEMBL top hits

e value

%identity

Alignment

A0A287RJF9 Uncharacterized protein

9.0e-53

88.6

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

A0A287U4Q9 Photosystem I P700 chlorophyll a apoprotein A1

9.0e-53

88.6

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

A0A2G2VUE6 Photosystem I chlorophyll a apoprotein A1

3.1e-53

89.47

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQ+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

A0A453LI83 Uncharacterized protein

1.2e-52

87.72

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQLWRA GITSELQLYCT IGAL+FAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQ+HVSL  NQFL+ GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

A0A4V6A9C2 Photosystem I P700 chlorophyll a apoprotein A1

1.8e-53

90.35

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Query:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE
        DP HIGP+AQLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSL  NQFLN GVDPKE
Subjt:  DPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFLNVGVDPKE

Query:  IPLPHEFFLNRDQL
        IPLPHEF LNRD L
Subjt:  IPLPHEFFLNRDQL

SwissProt top hits

e value

%identity

Alignment

Q14FF7 Photosystem I P700 chlorophyll a apoprotein A1

2.8e-51

71.53

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Query:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL
        DP HIGP+A                              QLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLL
Subjt:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL

Query:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL
        GLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Subjt:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL

Q27S50 Photosystem I P700 chlorophyll a apoprotein A1

2.8e-51

71.53

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Query:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL
        DP HIGP+A                              QLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLL
Subjt:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL

Query:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL
        GLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Subjt:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL

Q2MIA0 Photosystem I P700 chlorophyll a apoprotein A1

2.8e-51

71.53

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Query:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL
        DP HIGP+A                              QLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLL
Subjt:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL

Query:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL
        GLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Subjt:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL

Q2MII7 Photosystem I P700 chlorophyll a apoprotein A1

2.8e-51

71.53

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Query:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL
        DP HIGP+A                              QLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLL
Subjt:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL

Query:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL
        GLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Subjt:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL

Q9MTN8 Photosystem I P700 chlorophyll a apoprotein A1

2.8e-51

71.53

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Query:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL
        DP HIGP+A                              QLWRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLL
Subjt:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL

Query:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL
        GLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Subjt:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

3.6e-14

39.39

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Query:  QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYH-KASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLT--------NQFLNVGVDPK
        Q W   G+ +   LY   +  L  +AL L  G+ H   K  P+++WF++ ES LNHHL+GL G+ SL+W GH VHV++          N FLNV   P+
Subjt:  QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYH-KASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLT--------NQFLNVGVDPK

ATCG00350.1 Photosystem I, PsaA/PsaB protein

3.4e-52

70.83

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Query:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL
        DP HIGP+A                              Q+WRA GITSELQLYCT IGALVFAALMLFAG+FHYHKA+PKLAWFQDVESMLNHHLAGLL
Subjt:  DPAHIGPNA------------------------------QLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLL

Query:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL
        GLGSLSWAGHQVHVSL  NQFLN GVDPKEIPLPHEF LNRD L
Subjt:  GLGSLSWAGHQVHVSLLTNQFLNVGVDPKEIPLPHEFFLNRDQL

Sequences

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CDS sequence

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ATGCACTCTGCCACTCAACCCACACACCCTGCCATCCACCCACGCCCACAGTGCGATCCTGCTCACATTGGCCCTAATGCCCAGCTGTGGCGAGCATTTGGAATAACTAG
TGAATTACAACTCTACTGTACCGTAATTGGTGCATTAGTCTTCGCAGCCTTAATGCTTTTTGCCGGTTTCTTTCATTATCACAAGGCTTCTCCAAAATTGGCTTGGTTCC
AAGATGTAGAATCCATGTTGAATCACCATTTAGCGGGTCTGCTAGGACTTGGGTCTCTTTCTTGGGCGGGACATCAAGTACACGTATCTTTACTGACTAATCAATTTCTA
AATGTTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTTTCTTGAATCGGGATCAACTTGTGTGA

mRNA sequence

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Protein sequence

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MHSATQPTHPAIHPRPQCDPAHIGPNAQLWRAFGITSELQLYCTVIGALVFAALMLFAGFFHYHKASPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLLTNQFL
NVGVDPKEIPLPHEFFLNRDQLV

Clc07G06745 (gene) of Watermelon (cordophanus) v2 genome