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Clc07G07290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G07290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr07:19432802..19433422
RNA-Seq ExpressionClc07G07290
SyntenyClc07G07290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3480470.1 hypothetical protein EPI10_020896 [Gossypium australe]9.2e-0557.69Show/hide
Query:  THGELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGK----ILPTETQDQRT
        T  ELK RPQGALPS TE PR+ GK QC+ +TLRSGK    + PT  Q Q++
Subjt:  THGELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGK----ILPTETQDQRT

WP_217833224.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]7.5e-0771.74Show/hide
Query:  GELKIRPQGALPSTTEAPR---QNGKEQCQAVTLRSGKILPTETQD
        GE K R +G+LPS TEAPR    +GKEQCQAVTLRSGK+L TETQD
Subjt:  GELKIRPQGALPSTTEAPR---QNGKEQCQAVTLRSGKILPTETQD

XP_030495102.1 uncharacterized protein LOC115710889 [Cannabis sativa]1.2e-0472.22Show/hide
Query:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKIL
        +LK RPQG LPS TE PR++GKE C+A+TLRSGKIL
Subjt:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKIL

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]1.2e-0472.22Show/hide
Query:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKIL
        +LK RPQG LPS TE PR++GKE C+A+TLRSGKIL
Subjt:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKIL

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.6e-0472.22Show/hide
Query:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKIL
        +LK RPQG LPS TE PR++GKE C+AVTLRSGKI+
Subjt:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKIL

TrEMBL top hitse value%identityAlignment
A0A5B6WFU8 Uncharacterized protein4.5e-0557.69Show/hide
Query:  THGELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGK----ILPTETQDQRT
        T  ELK RPQGALPS TE PR+ GK QC+ +TLRSGK    + PT  Q Q++
Subjt:  THGELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGK----ILPTETQDQRT

A0A6J1DWK1 uncharacterized protein LOC1110250538.4e-0443.42Show/hide
Query:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKILP---------TETQDQRTQGNLQPHITSQPTPTIPTNDPQ
        +LK RP GALPS TE P+++ KEQC A+TLRSGK LP         T+   Q  QG  Q    S+P   +    P+
Subjt:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKILP---------TETQDQRTQGNLQPHITSQPTPTIPTNDPQ

A0A6J1DXK5 uncharacterized protein LOC1110255006.4e-0460.53Show/hide
Query:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKILPT
        +LK +P+G LPS  + P+++GKEQC A+TLRSGK LPT
Subjt:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKILPT

A0A6J1GJ68 uncharacterized protein LOC1114543444.9e-0452.08Show/hide
Query:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKILPTETQDQRTQGN
        EL+ RP G LP+ TE P++ GKEQCQA+ LRSGK +P+  +    QG+
Subjt:  ELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKILPTETQDQRTQGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTTTACCAACGCATGGTGAGCTCAAAATCAGACCCCAAGGAGCATTGCCCAGTACTACCGAAGCCCCACGACAAAACGGTAAAGAACAATGTCAAGCTGTGAC
ATTGAGGAGTGGGAAAATTCTTCCCACTGAAACGCAAGACCAGAGGACGCAAGGAAACCTACAACCTCACATCACTTCACAACCAACTCCAACAATACCAACTAATGATC
CGCAGCCATCATCAATCACCACAGCTTCTCAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTTTACCAACGCATGGTGAGCTCAAAATCAGACCCCAAGGAGCATTGCCCAGTACTACCGAAGCCCCACGACAAAACGGTAAAGAACAATGTCAAGCTGTGAC
ATTGAGGAGTGGGAAAATTCTTCCCACTGAAACGCAAGACCAGAGGACGCAAGGAAACCTACAACCTCACATCACTTCACAACCAACTCCAACAATACCAACTAATGATC
CGCAGCCATCATCAATCACCACAGCTTCTCAAGAATAG
Protein sequenceShow/hide protein sequence
MKTLPTHGELKIRPQGALPSTTEAPRQNGKEQCQAVTLRSGKILPTETQDQRTQGNLQPHITSQPTPTIPTNDPQPSSITTASQE