; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G07340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G07340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Genome locationClcChr07:19460564..19465636
RNA-Seq ExpressionClc07G07340
SyntenyClc07G07340
Gene Ontology termsGO:0015995 - chlorophyll biosynthetic process (biological process)
GO:0016117 - carotenoid biosynthetic process (biological process)
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (biological process)
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003526 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR020555 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
IPR036571 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600551.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.0e-10386.02Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MAV  P FAS T ATTSHQS SLS YP SFPR N   V SSSS PS R+NSAASPSV   TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS LLG
Subjt:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_004146533.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis sativus]9.8e-11090.13Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV----SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
        MA+SAP FASP AATTSHQS SLS YPPSFP    T +    SSSSLPSFR+NSAAS SV+ TTA+KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV----SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS

Query:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP
        IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADP
Subjt:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP

Query:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_008452007.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis melo]1.3e-11493.91Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASP AATTSHQSPSLSFYPPSFPRR  T + SSSSLPSFR+NSA S SV+ TTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_023548820.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]5.2e-10385.59Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MAV  P FAS T ATTSHQS SLS YP SFPR N   V SSSS PS R+NSAASPSV   TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMH+AGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

XP_038877996.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Benincasa hispida]6.3e-11796.52Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV--SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP
        MAVSAPFFASPTAATTSHQS SLSFYPPSF RRN TAV  SSSSLPSFR+ SAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV--SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP

Query:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV
        HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG DPSV
Subjt:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV

Query:  VNLKAKTHEKVDSLGENRSIAAHTVVLLMR
        VNLKAKTHEKVDSLGENRSIAAHTVVLLMR
Subjt:  VNLKAKTHEKVDSLGENRSIAAHTVVLLMR

TrEMBL top hitse value%identityAlignment
A0A0A0KWV1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase4.7e-11090.13Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV----SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
        MA+SAP FASP AATTSHQS SLS YPPSFP    T +    SSSSLPSFR+NSAAS SV+ TTA+KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV----SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIS

Query:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP
        IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADP
Subjt:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP

Query:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A1S3BTZ8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6.4e-11593.91Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASP AATTSHQSPSLSFYPPSFPRR  T + SSSSLPSFR+NSA S SV+ TTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A5D3D287 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6.4e-11593.91Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
        MAVSAPFFASP AATTSHQSPSLSFYPPSFPRR  T + SSSSLPSFR+NSA S SV+ TTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        NLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1FX89 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase9.5e-10385.59Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MAV  P FAS T ATTSHQS SLS YP SFPR N   V SSSS PS R+NSAASPSV   TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

A0A6J1J2X8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.6e-10285.59Show/hide
Query:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MAV  P FAS T ATTSHQS SLS YP SFPR N   V SSSS PS R+NSAASPSV   TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSLPSFRLNSAASPSVAPTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS LLG
Subjt:  GISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

SwissProt top hitse value%identityAlignment
B2UFT6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6.3e-4351.9Show/hide
Query:  LPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATL
        +  R+G G+D+H L  G  LI+GG+ IPH RG   HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR +H+AGY +GN+DAT+
Subjt:  LPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATL

Query:  ILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR
        I Q+PKL+PH   + ANL+E LG  P   N+KAKT+EK+   G+   I A  VVL+ R
Subjt:  ILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR

Q1LLZ4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.6e-4353.85Show/hide
Query:  RVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQ
        R+G G+D+H L PG  LI+GG+ IPHDRG   HSD D LLH V DA+ GA  L DIG+ FPD+DP + GA S V ++EAVR + EAGY+IGN+DAT+I Q
Subjt:  RVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        +PKL+PH   + ANL+E LG   +  N+KAKT+EK+   G+   I A   VL+ RR
Subjt:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q6EPN6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.5e-8169.26Show/hide
Query:  SAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSLPSFRLN-----SAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP
        S+ F ASP A   +              R  ST  +S + PS RL      +AA+       AV +      LPFRVGHGFDLHRLEPG PLIIGGI IP
Subjt:  SAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSLPSFRLN-----SAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP

Query:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV
        HDRGC+AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP+WKGA SSVFM+EAV+LMHEAGY++GNLDATLILQ+PK+SP KE IR+NL +LLGADPSV
Subjt:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV

Query:  VNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        VNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Subjt:  VNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q9CAK8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic3.2e-8781.73Show/hide
Query:  RNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        R   ++S S  PS  + SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
Subjt:  RNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        FPDSDPKWKGA SSVF+KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  FPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Q9M4W3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.4e-8269.75Show/hide
Query:  MAVSAPFFAS---PTAATTSHQSPSL------SFYPPSFPRRNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLI
        MA++  F+ S   P+  T  ++   L      S   PS+ R ++    + SL      S A+    P  A  + +PSK L FRVGHGFDLHRLEPGYPLI
Subjt:  MAVSAPFFAS---PTAATTSHQSPSL------SFYPPSFPRRNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLI

Query:  IGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL
        IGGI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVF+KEAVRLM EAGY++GNLDATLILQRPK+SPHKEAIR NL +L
Subjt:  IGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSEL

Query:  LGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        LGADP VVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Subjt:  LGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Arabidopsis top hitse value%identityAlignment
AT1G63970.1 isoprenoid F2.3e-8881.73Show/hide
Query:  RNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        R   ++S S  PS  + SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
Subjt:  RNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        FPDSDPKWKGA SSVF+KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  FPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

AT1G63970.2 isoprenoid F6.0e-8177.66Show/hide
Query:  RNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        R   ++S S  PS  + SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD        VDAILGALGLPDIGQI
Subjt:  RNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
        FPDSDPKWKGA SSVF+KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Subjt:  FPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCCGCCCCCTTCTTCGCCTCTCCCACCGCCGCCACAACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAAATTCCACTGC
TGTTTCCTCCTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGCCGACTACCGCCGTCAAATCCGATTCTCCTTCCAAAACCTTGCCGTTTC
GGGTCGGACATGGCTTCGATCTTCACAGGTTGGAGCCTGGGTACCCTTTGATTATTGGGGGAATTAGTATTCCCCATGATAGAGGCTGCGAGGCTCATTCCGATGGGGAT
GTTCTACTACACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGACCCCAAATGGAAGGGTGCTCCATCATCCGT
ATTCATGAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTAATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTA
TCAGAGCAAACCTTTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACACATGAGAAAGTTGACAGCCTCGGCGAAAACAGAAGTATTGCTGCT
CATACTGTGGTCCTCTTGATGAGGAGATAG
mRNA sequenceShow/hide mRNA sequence
GCAATGTAATAAATAAGCGATGGCATGTTATTGTAATTTGTACCCCACACGACACCCTCCCTACGCGCCAACGACACAATTCAACCACAAACAAACCTCCGCTCGCACTC
ACCTCTTCTTCCTTTGCCCCTTTCCATGGCAGTCTCCGCCCCCTTCTTCGCCTCTCCCACCGCCGCCACAACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTT
CCTTTCCCAGAAGAAATTCCACTGCTGTTTCCTCCTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGCCGACTACCGCCGTCAAATCCGAT
TCTCCTTCCAAAACCTTGCCGTTTCGGGTCGGACATGGCTTCGATCTTCACAGGTTGGAGCCTGGGTACCCTTTGATTATTGGGGGAATTAGTATTCCCCATGATAGAGG
CTGCGAGGCTCATTCCGATGGGGATGTTCTACTACACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGACCCCA
AATGGAAGGGTGCTCCATCATCCGTATTCATGAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTAATACTTCAAAGACCA
AAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTTTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACACATGAGAAAGTTGACAGCCT
CGGCGAAAACAGAAGTATTGCTGCTCATACTGTGGTCCTCTTGATGAGGAGATAGAAGCCCTGCCCTCCCACCCATTAGTGCTGCTGTACAAGTGTAATAACAACAGTGT
ACTCATTTAAGTGGAATATGCTATATTGTCAATACTTTGAATTTTCCCCCATTCCCTCCACACTTCCCCGCGAAGTGCAAACGATTGTAAGTTGGTTGTATTAAAACGTT
TTAATCATTCAACAACATGAAAAAGAAAATGGTTTGGTGGGAGAAGATTAGAAATTGCCTTTAATGATTACTTTTCTCAGGGAAATTTGTATTTTTCACCTAAAAAAGTT
TTCACCTTAGTTTTGTAACCTCTTTTGAAAAACTATTTTCTGACCTCTTCCTTACTTTTTGAAATTTTAAATAAAGGGTCCCACATGGTGAAAGTACCATTTTGCTCCTT
CATTCAAGTGTCAACAATTTTATCTTTTTCTAATACAACTATTCAAACCCAATTTCAATTTTAAACATTAAACTTCATTTTTTTCATTTTGTTTTCTATGTGTTTTGCAA
GTTTCAACCAATATTTGTGGTAGATTTGTTATAATTTTT
Protein sequenceShow/hide protein sequence
MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSLPSFRLNSAASPSVAPTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGD
VLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAA
HTVVLLMRR