; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc07G07400 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc07G07400
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description40S ribosomal protein S10-1-like
Genome locationClcChr07:19779558..19788624
RNA-Seq ExpressionClc07G07400
SyntenyClc07G07400
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044841.1 40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]1.4e-9498.88Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

TYK16623.1 40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]1.9e-9498.88Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

XP_004146529.1 40S ribosomal protein S10-1 [Cucumis sativus]6.4e-9599.44Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

XP_008452010.1 PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo]1.9e-9498.88Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

XP_022985005.1 40S ribosomal protein S10-1-like [Cucurbita maxima]8.3e-9599.44Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

TrEMBL top hitse value%identityAlignment
A0A0A0KUQ3 S10_plectin domain-containing protein3.1e-9599.44Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A1S3BST3 40S ribosomal protein S10-1-like9.0e-9598.88Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A5A7TTJ6 40S ribosomal protein S10-1-like6.9e-9598.88Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A5D3CXK7 40S ribosomal protein S10-1-like9.0e-9598.88Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

A0A6J1JA51 40S ribosomal protein S10-1-like4.0e-9599.44Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-14.2e-7380.23Show/hide
Query:  EKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-
        +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG 
Subjt:  EKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS
        GPPGDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +SS
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS

P0DKK9 40S ribosomal protein S10-24.2e-7380.23Show/hide
Query:  EKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-
        +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG 
Subjt:  EKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS
        GPPGDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +SS
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS

Q9FFS8 40S ribosomal protein S10-25.8e-6780.34Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF
        SE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPF
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF

Query:  GGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS
        GG  GDRPRGPPR + GERRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA S
Subjt:  GGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS

Q9LTF2 40S ribosomal protein S10-36.0e-7280Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDR RG PR EGG+R RFGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S LP
Subjt:  GPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

Q9SW09 40S ribosomal protein S10-12.4e-7378.21Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein1.7e-7478.21Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein3.9e-5865.36Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GP G                                 G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Subjt:  GPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein4.2e-6880.34Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF
        SE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPF
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF

Query:  GGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS
        GG  GDRPRGPPR + GERRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA S
Subjt:  GGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein2.5e-4981.48Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKG
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + GERRFGDRDGYRGGP+  GGE+ GDK 
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKG

Query:  GAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS
        GAPADY+P F GG GG R GFGRGAG +GGGAA S
Subjt:  GAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein4.3e-7380Show/hide
Query:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
        SE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFG
Subjt:  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG

Query:  GPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
        GPPGDR RG PR EGG+R RFGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S LP
Subjt:  GPPGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCAGTCACTCGAGCCTACAGGAACTCCTTCGCTGAGGTCTTGCTCTCGCTCTCGCTCGTCACTGCCATCGCCATTGTCTCGCTCGGTGGTCTAGCTCTCGGCTC
GGAAAAAAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTCTGCTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATCTGC
AGGTTATTAAGCTGATGCAAAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATCGAGTTCCTCAGG
ACTTACCTTAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGACCCTTTGGCGGACCACCCGGCGATCGCCCACGGGGTCCACC
TCGTTTTGAGGGTGGTGAGAGAAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCCGGTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCTGCAGATT
ACAGGCCTTCATTTGGGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACCAGTCACTCGAGCCTACAGGAACTCCTTCGCTGAGGTCTTGCTCTCGCTCTCGCTCGTCACTGCCATCGCCATTGTCTCGCTCGGTGGTCTAGCTCTCGGCTC
GGAAAAAAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTCTGCTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATCTGC
AGGTTATTAAGCTGATGCAAAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATCGAGTTCCTCAGG
ACTTACCTTAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGACCCTTTGGCGGACCACCCGGCGATCGCCCACGGGGTCCACC
TCGTTTTGAGGGTGGTGAGAGAAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCCGGTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCTGCAGATT
ACAGGCCTTCATTTGGGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCTTGAAAAGTATGGTCT
TACAAGCAGTTCAATGAATTTTCAGTGGAATGAGTTAGCAGCTTGATTGAAGAGTTTGTTAGCTTTTTTCCCTTTCATTTAGCTTATGGGAATCTTATAAATTCAAATTT
TCATTGTGCAAATTGAAGTTTAGTGGAACTACTGCTTTGCAAGTATAAATTTTGTTCTTCTCTTTAAGGGCCTTACTATTATTGGTAGCCTGTGAGCAAGATTGAGATTT
TAATGTTTTGAATTCT
Protein sequenceShow/hide protein sequence
MPPVTRAYRNSFAEVLLSLSLVTAIAIVSLGGLALGSEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLR
TYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP