CuGenDBv2

Gene ID	Clc07G07850
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	GDP-mannose 4,6 dehydratase 1-like
Genome location	ClcChr07:20851088..20859134
RNA-Seq Expression	Clc07G07850
Synteny	Clc07G07850
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044809.1 uncharacterized protein E6C27_scaffold74G001000 [Cucumis melo var. makuwa]

6.1e-91

94.44

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERS+AVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEV DALAVKLLQRLNFSVSAVKSASQHLS VHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+AT D+GSSCNSSS+Q
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

XP_004146513.1 uncharacterized protein LOC101208248 [Cucumis sativus]

1.5e-92

95.45

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRSHS R ADVISTVSERS+AVDPILE LKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQD KVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+AT D+GSSCNSSSEQ
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

XP_008452067.1 PREDICTED: uncharacterized protein LOC103493183 [Cucumis melo]

2.5e-92

95.45

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERS+AVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+AT D+GSSCNSSS+Q
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

XP_022942738.1 uncharacterized protein LOC111447685 [Cucurbita moschata]

7.5e-89

89.9

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASES+LS S   RPADVISTVSERS+AVDPILERLKSL+ITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFS+YRNWQDE+VQ+INKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVK+AS+HLSEVH+L+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKPFVVAT DSGSSCNSSS+Q
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

XP_038891870.1 uncharacterized protein LOC120081229 [Benincasa hispida]

8.6e-93

95.45

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S RPADVISTVSERS+A DPILERL SLQITTPILQ+PP EGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVAT DSGSSCNSSSEQ
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUT6 Uncharacterized protein

7.1e-93

95.45

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRSHS R ADVISTVSERS+AVDPILE LKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQD KVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+AT D+GSSCNSSSEQ
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

A0A1S3BSD9 uncharacterized protein LOC103493183

1.2e-92

95.45

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERS+AVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+AT D+GSSCNSSS+Q
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

A0A5A7TU92 Uncharacterized protein

3.0e-91

94.44

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERS+AVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEV DALAVKLLQRLNFSVSAVKSASQHLS VHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+AT D+GSSCNSSS+Q
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

A0A5D3CYS3 Uncharacterized protein

1.2e-92

95.45

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERS+AVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+AT D+GSSCNSSS+Q
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

A0A6J1FVK8 uncharacterized protein LOC111447685

3.6e-89

89.9

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASES+LS S   RPADVISTVSERS+AVDPILERLKSL+ITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFS+YRNWQDE+VQ+INKNQ
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ
        EDIENKIEVTDALAVKLLQRLNFSVSAVK+AS+HLSEVH+L+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKPFVVAT DSGSSCNSSS+Q
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGSSCNSSSEQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G66290.1 unknown protein

3.1e-64

68.42

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Query:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ
        MGAS+S L  S   R  DVI+T+S RS+ VDPILE LK+L ++ PIL+SPPTE SLTDILVRK  SSS++ TV+PQ+L+ELFSIYR WQ+ K QEI K Q
Subjt:  MGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGS
        EDIENKIEV DALA KLLQR N SVSA+++ +QHLS+VH L+VE+GELKGRLTEVISNCD LC+RI SEGPESLRS++ PF +A+ DS S
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATGDSGS

Sequences

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CDS sequence

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ATGTCCCGGTTTGAGCTTGAGCCGAAACCGATTTTCGGACATACTTGGGGGCCTTCGACTCCGCTGGCTTTTTCCATCCCCTTGGTTGCATCGGAGCTTTCACTGATCGG
AAACTATCTCCGAGAGTCTACAGACATGGGGGCTTCAGAATCCGCACTCTCACGCTCTCACTCAGTGAGGCCAGCTGATGTAATCTCCACCGTGTCTGAGCGATCAGACG
CTGTTGATCCCATCTTGGAGAGGCTCAAGTCCCTTCAAATTACAACACCGATATTGCAGTCACCTCCCACGGAAGGTAGCCTGACAGATATCTTAGTAAGAAAACCGCCC
TCTTCTTCAAATGCTGTTACTGTGAATCCCCAAGTGCTTTTGGAGCTCTTCTCAATATACCGTAATTGGCAGGATGAAAAGGTCCAAGAGATCAACAAAAATCAGGAAGA
TATCGAAAACAAGATTGAAGTCACAGATGCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCTGTTTCTGCAGTCAAGTCAGCGTCCCAACATCTGTCAGAAGTTC
ACTCACTGGAAGTGGAAATCGGTGAGCTTAAGGGAAGATTGACAGAGGTTATTAGTAATTGCGATGCATTATGCAGAAGAATTGCCTCAGAAGGTCCAGAGTCTCTTCGA
TCATCTATCAAGCCATTTGTTGTCGCTACGGGCGACTCGGGGTCTTCCTGCAACTCATCTTCTGAGCAAGAAACAAAGCACTCCATTGCTAAAGATGGACCGCTGAGCGT
AAGTAGCCCTTTAGAAGCAGTTGGCTCCCACAAAAATCGCCACCTGCCGACCGGCCAGGCAAAAGCCACAGCCACATTGAGAACTTCTCACTGGCCCTTTGAAAGGAGTT
ACCCCACCGACGTAGCCTCCTCTTGCTTGTTAAGATCCATCTTCTAG

mRNA sequence

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Protein sequence

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MSRFELEPKPIFGHTWGPSTPLAFSIPLVASELSLIGNYLRESTDMGASESALSRSHSVRPADVISTVSERSDAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPP
SSSNAVTVNPQVLLELFSIYRNWQDEKVQEINKNQEDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLR
SSIKPFVVATGDSGSSCNSSSEQETKHSIAKDGPLSVSSPLEAVGSHKNRHLPTGQAKATATLRTSHWPFERSYPTDVASSCLLRSIF

Clc07G07850 (gene) of Watermelon (cordophanus) v2 genome